HHSEARCH alignment of GI: 254780460 and SCOP domain: d2fs2a1

Alignment
>d2fs2a1 d.38.1.5 (A:1-131) Phenylacetic acid degradation protein PaaI {Escherichia coli [TaxId: 562]}
Probab=93.21  E-value=0.25  Score=25.54  Aligned_cols=102  Identities=13%  Similarity=0.029  Sum_probs=58.9

Q ss_pred             EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE
Q ss_conf             89999718441342357887507865530045568995211275788879988640123346882667630451141023
Q gi|254780460|r   39 RITQISETGGNYNQGVVRAEMDITPNLWFFDCHFKNDPVMPGCLGLDALWQLTGFFLGWLGELGKGRAVSVSNIKFRGMV  118 (172)
Q Consensus        39 rV~~i~~~~g~~g~G~i~aek~i~~d~wff~gHFp~~PvmPGvL~iEa~~Ql~~~~~~~~~~~~~~~~~~~~~vkfr~~V  118 (172)
                      +++++++       |+++.+..++++  ...   +. .++=|-.+. +++-.++.+......  ........+++|.+++
T Consensus        25 ~i~~~~~-------g~~~~~~~v~~~--~~n---~~-G~vhGG~l~-al~D~a~~~a~~~~~--~~~~t~~~~i~fl~p~   88 (131)
T d2fs2a1          25 DIISMDE-------GFAVVTMTVTAQ--MLN---GH-QSCHGGQLF-SLADTAFAYACNSQG--LAAVASACTIDFLRPG   88 (131)
T ss_dssp             EEEEEET-------TEEEEEEECCGG--GBC---TT-SBBCHHHHH-HHHHHHHHHHHHTTT--CCCEEEEEEEEECSCC
T ss_pred             EEEEEEC-------CEEEEEEECCHH--HCC---CC-CCCCCEEHH-HHHHHHHHHHHHHCC--CCEEEEEEEEEEECCC
T ss_conf             9999839-------999999991799--989---99-958675024-689999999997269--8528888654685256


Q ss_pred             CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE-CCEEEEEEEE
Q ss_conf             37985799999988963078579999999999-9999999971
Q gi|254780460|r  119 TPDCKLVEYGIDFKKILRGRVVLGAADGWVKV-NGKEIYQAND  160 (172)
Q Consensus       119 ~Pgd~~i~~~i~ik~v~~~~~~~~~~~g~~~v-dg~~i~~a~~  160 (172)
                      .+|+ .++.+.+   +.+.++.+.+.+++++- ||++|++++.
T Consensus        89 ~~G~-~l~~~a~---v~~~gr~~~~~~~~v~~~~g~lvA~~~G  127 (131)
T d2fs2a1          89 FAGD-TLTATAQ---VRHQGKQTGVYDIEIVNQQQKTVALFRG  127 (131)
T ss_dssp             BTTC-EEEEEEE---EEEECSSEEEEEEEEECTTSCEEEEEEE
T ss_pred             CCCC-EEEEEEE---EEECCCCEEEEEEEEEECCCCEEEEEEE
T ss_conf             8897-9999999---9993887999999999489989999997


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Phenylacetic acid degradation protein PaaI
species: Escherichia coli [TaxId: 562]