HHsearch alignment for GI: 254780461 and conserved domain: PRK04262

>PRK04262 hypothetical protein; Provisional.
Probab=99.46  E-value=1e-11  Score=92.18  Aligned_cols=279  Identities=18%  Similarity=0.203  Sum_probs=158.2

Q ss_pred             CCCEEEEEEEEECCCC-CCHHHHHHHHHCCCCCCEECCCC--CCCCCCEEECCEECCCHHHCCCHHHHHHCCHHHHHHHH
Q ss_conf             9728999332670889-89999999998188762336775--75478512454014786684898999724999999999
Q gi|254780461|r    1 MRRVAVTGMGIVSSIG-NNVSEVAISLREARSGITFSEDF--AKFGFRCQVWGKPLLNAAELIDRKAMRFLSQGGTWGHL   77 (406)
Q Consensus         1 M~rV~ItG~G~v~p~G-~~~~e~w~~L~~G~sgi~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~r~~d~~~~l~l~   77 (406)
T Consensus         1 M~-vgI~g~G~YlP~~~v~n~el~~~~--~~~-----~ewI~~rtGI~~R~va~~d---------------E~t~~lA~~   57 (346)
T PRK04262          1 MM-VGIVGYGAYIPRYRIKVEEIARVW--GDD-----PEAIKKGLGVEEKSVPGPD---------------EDTATIAVE   57 (346)
T ss_pred             CC-CEEEEEEEECCCEEECHHHHHHHH--CCC-----HHHHEECCCCEEEEECCCC---------------CCHHHHHHH
T ss_conf             92-179899995899688499999885--999-----6473136685078778999---------------999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC--CCC
Q ss_conf             999975341013322223333205632567630145677888751252212320012233235677877631223--333
Q gi|254780461|r   78 AMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIR--GTS  155 (406)
Q Consensus        78 aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~--Gp~  155 (406)
T Consensus        58 AA~~aL~~agi~~~dIdl----Ii~aT~Tpd~~--------------------------~p-stA~~vq~~LGl~~~~~a  106 (346)
T PRK04262         58 AARNALKRAGIDPKEIGA----VYVGSESHPYA--------------------------VK-PTATIVAEALGATPDLTA  106 (346)
T ss_pred             HHHHHHHHCCCCHHHCCE----EEEEECCCCCC--------------------------CC-CHHHHHHHHHCCCCCEEE
T ss_conf             999999875999778898----99964788866--------------------------76-506899998389988059


Q ss_pred             CCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEE
Q ss_conf             33333344443343210011345605578873134566753222222122334678662232223566666413126514
Q gi|254780461|r  156 YSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAA  235 (406)
Q Consensus       156 ~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~~~G~~~gEGa~  235 (406)
T Consensus       107 fDi~aaCsGf~~aL~~A~~~I~sg~~~~~LVV~aD~~~~------------------~~~~~~--------e~~~GaGa~  160 (346)
T PRK04262        107 ADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG------------------APGDAL--------EYTAAAGGA  160 (346)
T ss_pred             EEHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC------------------CCCCEE--------EECCCCCEE
T ss_conf             861022114999999999999739997699983133347------------------874056--------666888769


Q ss_pred             EEECCCHHHHCCCCCCCCCEEEEE-EEECCCCCCC------CC------CH-----HHHHHHHHHHHHHH---HCCCCEE
Q ss_conf             431122132011001123201221-0102652123------44------33-----57789887542100---1002102
Q gi|254780461|r  236 VIVLEEMERAKARGAKIYAELTGY-GSTCDGDDMV------SP------SG-----EGAIRCMRQALSSV---EEPVDYI  294 (406)
Q Consensus       236 ~~vLe~~~~A~~rGa~i~a~i~g~-~~~~d~~~~~------~p------~~-----~g~~~~i~~Al~~a---~~~i~~i  294 (406)
T Consensus       161 A~~~g~~~~--------~~~~~~~~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~  232 (346)
T PRK04262        161 AFIIGAEEV--------IAEIEATYSYVTDTPDFWRREGEPYPRHGERFTGEPAYFKHIISAAKGLMEKLGTKPSDYDYA  232 (346)
T ss_pred             EEEECCCCC--------CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHHHHHCCCCHHHCCEE
T ss_conf             999877997--------337456334457874220569982423077162523279999999999999829997885889


Q ss_pred             EECCCCCCCCCCCHHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             21024555444200122220235--5443364752101323589999999999999871840786888889766788873
Q gi|254780461|r  295 NTHGTATPKGDKKEVEAIREVFK--GNIPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGIPI  372 (406)
Q Consensus       295 ~~hgtgt~~~D~~E~~ai~~~f~--~~~~~v~s~K~~~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~~~l~~  372 (406)
T Consensus       233 v~HQAn~r---ii--~~~~k~Lgi~~ekv~~nl~~~~~GNTssASiplaL~~~l---~~~--------------------  284 (346)
T PRK04262        233 VFHQPNGK---FP--LRAAKMLGFTKEQVKPGLLTPYIGNTYSASALLGLAAVL---DVA--------------------  284 (346)
T ss_pred             ECCCCCHH---HH--HHHHHHCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHH---HCC--------------------
T ss_conf             51676578---99--999998299989922342177647750336999999998---438--------------------


Q ss_pred             CCCCCCCCCCCEEEEECCCCCCEEEEEEEE
Q ss_conf             799885588358999355677736799999
Q gi|254780461|r  373 VRKRIDNAKIDTVLSNSFGFGGTNATLVFR  402 (406)
Q Consensus       373 v~~~~~~~~~~~al~~s~GfGG~n~~~vl~  402 (406)
T Consensus       285 -------k~Gd~Ill~~fG~G~~~~~~~~~  307 (346)
T PRK04262        285 -------KPGDRILVVSFGSGAGSDAFSIT  307 (346)
T ss_pred             -------CCCCEEEEEEECCCCCEEEEEEE
T ss_conf             -------99899999985697313689999