HHsearch alignment for GI: 254780461 and conserved domain: PRK04262
>PRK04262 hypothetical protein; Provisional.
Probab=99.46 E-value=1e-11 Score=92.18 Aligned_cols=279 Identities=18% Similarity=0.203 Sum_probs=158.2
Q ss_pred CCCEEEEEEEEECCCC-CCHHHHHHHHHCCCCCCEECCCC--CCCCCCEEECCEECCCHHHCCCHHHHHHCCHHHHHHHH
Q ss_conf 9728999332670889-89999999998188762336775--75478512454014786684898999724999999999
Q gi|254780461|r 1 MRRVAVTGMGIVSSIG-NNVSEVAISLREARSGITFSEDF--AKFGFRCQVWGKPLLNAAELIDRKAMRFLSQGGTWGHL 77 (406)
Q Consensus 1 M~rV~ItG~G~v~p~G-~~~~e~w~~L~~G~sgi~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~r~~d~~~~l~l~ 77 (406)
T Consensus 1 M~-vgI~g~G~YlP~~~v~n~el~~~~--~~~-----~ewI~~rtGI~~R~va~~d---------------E~t~~lA~~ 57 (346)
T PRK04262 1 MM-VGIVGYGAYIPRYRIKVEEIARVW--GDD-----PEAIKKGLGVEEKSVPGPD---------------EDTATIAVE 57 (346)
T ss_pred CC-CEEEEEEEECCCEEECHHHHHHHH--CCC-----HHHHEECCCCEEEEECCCC---------------CCHHHHHHH
T ss_conf 92-179899995899688499999885--999-----6473136685078778999---------------999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC--CCC
Q ss_conf 999975341013322223333205632567630145677888751252212320012233235677877631223--333
Q gi|254780461|r 78 AMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIR--GTS 155 (406)
Q Consensus 78 aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~--Gp~ 155 (406)
T Consensus 58 AA~~aL~~agi~~~dIdl----Ii~aT~Tpd~~--------------------------~p-stA~~vq~~LGl~~~~~a 106 (346)
T PRK04262 58 AARNALKRAGIDPKEIGA----VYVGSESHPYA--------------------------VK-PTATIVAEALGATPDLTA 106 (346)
T ss_pred HHHHHHHHCCCCHHHCCE----EEEEECCCCCC--------------------------CC-CHHHHHHHHHCCCCCEEE
T ss_conf 999999875999778898----99964788866--------------------------76-506899998389988059
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEE
Q ss_conf 33333344443343210011345605578873134566753222222122334678662232223566666413126514
Q gi|254780461|r 156 YSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAA 235 (406)
Q Consensus 156 ~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~~~G~~~gEGa~ 235 (406)
T Consensus 107 fDi~aaCsGf~~aL~~A~~~I~sg~~~~~LVV~aD~~~~------------------~~~~~~--------e~~~GaGa~ 160 (346)
T PRK04262 107 ADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG------------------APGDAL--------EYTAAAGGA 160 (346)
T ss_pred EEHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC------------------CCCCEE--------EECCCCCEE
T ss_conf 861022114999999999999739997699983133347------------------874056--------666888769
Q ss_pred EEECCCHHHHCCCCCCCCCEEEEE-EEECCCCCCC------CC------CH-----HHHHHHHHHHHHHH---HCCCCEE
Q ss_conf 431122132011001123201221-0102652123------44------33-----57789887542100---1002102
Q gi|254780461|r 236 VIVLEEMERAKARGAKIYAELTGY-GSTCDGDDMV------SP------SG-----EGAIRCMRQALSSV---EEPVDYI 294 (406)
Q Consensus 236 ~~vLe~~~~A~~rGa~i~a~i~g~-~~~~d~~~~~------~p------~~-----~g~~~~i~~Al~~a---~~~i~~i 294 (406)
T Consensus 161 A~~~g~~~~--------~~~~~~~~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~ 232 (346)
T PRK04262 161 AFIIGAEEV--------IAEIEATYSYVTDTPDFWRREGEPYPRHGERFTGEPAYFKHIISAAKGLMEKLGTKPSDYDYA 232 (346)
T ss_pred EEEECCCCC--------CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHHHHHCCCCHHHCCEE
T ss_conf 999877997--------337456334457874220569982423077162523279999999999999829997885889
Q ss_pred EECCCCCCCCCCCHHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21024555444200122220235--5443364752101323589999999999999871840786888889766788873
Q gi|254780461|r 295 NTHGTATPKGDKKEVEAIREVFK--GNIPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGIPI 372 (406)
Q Consensus 295 ~~hgtgt~~~D~~E~~ai~~~f~--~~~~~v~s~K~~~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~~~l~~ 372 (406)
T Consensus 233 v~HQAn~r---ii--~~~~k~Lgi~~ekv~~nl~~~~~GNTssASiplaL~~~l---~~~-------------------- 284 (346)
T PRK04262 233 VFHQPNGK---FP--LRAAKMLGFTKEQVKPGLLTPYIGNTYSASALLGLAAVL---DVA-------------------- 284 (346)
T ss_pred ECCCCCHH---HH--HHHHHHCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHH---HCC--------------------
T ss_conf 51676578---99--999998299989922342177647750336999999998---438--------------------
Q ss_pred CCCCCCCCCCCEEEEECCCCCCEEEEEEEE
Q ss_conf 799885588358999355677736799999
Q gi|254780461|r 373 VRKRIDNAKIDTVLSNSFGFGGTNATLVFR 402 (406)
Q Consensus 373 v~~~~~~~~~~~al~~s~GfGG~n~~~vl~ 402 (406)
T Consensus 285 -------k~Gd~Ill~~fG~G~~~~~~~~~ 307 (346)
T PRK04262 285 -------KPGDRILVVSFGSGAGSDAFSIT 307 (346)
T ss_pred -------CCCCEEEEEEECCCCCEEEEEEE
T ss_conf -------99899999985697313689999