HHsearch alignment for GI: 254780461 and conserved domain: PRK06158
>PRK06158 thiolase; Provisional.
Probab=99.70 E-value=2.3e-15 Score=114.99 Aligned_cols=267 Identities=16% Similarity=0.205 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999975341013322223333205632567630145677888751252212320012233235677877631223
Q gi|254780461|r 73 TWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIR 152 (406)
Q Consensus 73 ~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~ 152 (406)
T Consensus 30 eL~~eA~~~Al~DAGi~~~dID----~~~~g~~~~~-------------------------------~~g~~~a~~lGl~ 74 (384)
T PRK06158 30 ELLAQAAVRALADAGLTMADVD----GLFTASPDSA-------------------------------LWGLSVAEYLGIR 74 (384)
T ss_pred HHHHHHHHHHHHHCCCCHHHCC----EEEEEECCCC-------------------------------CHHHHHHHHCCCC
T ss_conf 9999999999997599999909----8999715766-------------------------------5399999982999
Q ss_pred CC-CCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCC-CCCC--CCC-----CCCC-------C--CCC-CC----C
Q ss_conf 33-3333333444433432100113456055788731345-6675--322-----2222-------1--223-34----6
Q gi|254780461|r 153 GT-SYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQED-LDWT--MSN-----LFDA-------M--GAM-SS----H 209 (406)
Q Consensus 153 Gp-~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~-~~~~--~~~-----~f~~-------~--~~l-s~----~ 209 (406)
T Consensus 75 ~~~~~~~~~ggas~~~al~~A~~aI~sG~~d~vlV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~Al~a~rym~~ 154 (384)
T PRK06158 75 PRFVDGTMIGGSSFVSHLLPAALALEAGLCDVALICYGSNQRSAGGKLVSMLDPQPYEAPYKPVNPVTAYALAAARHMHQ 154 (384)
T ss_pred CCEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 81243666686899999999999998588538999523555556655433568744443235554688999999999999
Q ss_pred C------------------CCCCCC----------------CCCCCCCCCCCEEECCCEEEEECCCHHHHCCCCCCCCCE
Q ss_conf 7------------------866223----------------222356666641312651443112213201100112320
Q gi|254780461|r 210 F------------------NHDPCS----------------ASRPYDSRRDGFVISGGAAVIVLEEMERAKARGAKIYAE 255 (406)
Q Consensus 210 ~------------------~~~p~~----------------~~rPFd~~~~G~~~gEGa~~~vLe~~~~A~~rGa~i~a~ 255 (406)
T Consensus 155 yG~t~E~lA~vavk~r~nA~~NP~A~~r~~it~edvl~s~~Ia~PL~l-~dc~~~sDGAaAvVl~s~e~Ar~l~~~p-V~ 232 (384)
T PRK06158 155 YGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRPP-VY 232 (384)
T ss_pred HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHH-CCCCCCCCCEEEEEEECHHHHHHCCCCC-EE
T ss_conf 798899999999999998706986313788799997215354566001-1466566634899995288884479995-79
Q ss_pred EEEEEEECCCCCCCC-CC--HHHHHHHHHHHHHHH---HCCCCEEEECCCCCCCCCCCHHHHHHCC--------------
Q ss_conf 122101026521234-43--357789887542100---1002102210245554442001222202--------------
Q gi|254780461|r 256 LTGYGSTCDGDDMVS-PS--GEGAIRCMRQALSSV---EEPVDYINTHGTATPKGDKKEVEAIREV-------------- 315 (406)
Q Consensus 256 i~g~~~~~d~~~~~~-p~--~~g~~~~i~~Al~~a---~~~i~~i~~hgtgt~~~D~~E~~ai~~~-------------- 315 (406)
T Consensus 233 i~g~g~~~~~~~~~~~~d~~~~~~~~aa~~A~~~AGi~p~DiDvaev~D~Ft~----~~l~~~E~lG~~~~Ge~~~~v~~ 308 (384)
T PRK06158 233 VLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGVTPADIDVVELYDAFTI----NTILFLEDLGFCAKGEGGAFVEG 308 (384)
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHH----HHHHHHHHCCCCCCCCHHHHHHC
T ss_conf 99999861687643355210279999999999980999777878864177608----89999998499989846999977
Q ss_pred ----CCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf ----35544336475210--132358999999999999987184078688888976678887379988558835899935
Q gi|254780461|r 316 ----FKGNIPYIQSTKSL--TGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNS 389 (406)
Q Consensus 316 ----f~~~~~~v~s~K~~--~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~~~l~~v~~~~~~~~~~~al~~s 389 (406)
T Consensus 309 G~~~~~G~-~PvN~sGGlls~Ghp-GatG~~~~~E~~~QLrG~-ag------------------~rQV--~~a~~al~~~ 365 (384)
T PRK06158 309 GRIAPGGR-LPVNTNGGGLSCVHP-GMYGLFLIIEAVRQLRGE-AG------------------ERQV--AGAEVALAHG 365 (384)
T ss_pred CCCCCCCC-EEECCCCHHHCCCCC-HHHHHHHHHHHHHHHCCC-CC------------------CCCC--CCCCEEEEEC
T ss_conf 99567997-415379701238996-177999999999996177-56------------------6758--9877899968
Q ss_pred C-CCCCEEEEEEEEE
Q ss_conf 5-6777367999994
Q gi|254780461|r 390 F-GFGGTNATLVFRR 403 (406)
Q Consensus 390 ~-GfGG~n~~~vl~~ 403 (406)
T Consensus 366 ~GG~~~~~~~~vL~~ 380 (384)
T PRK06158 366 NGGVLSSQATAILGT 380 (384)
T ss_pred CCCCCCCEEEEEEEC
T ss_conf 886221159999805