HHsearch alignment for GI: 254780461 and conserved domain: PRK08256
>PRK08256 lipid-transfer protein; Provisional.
Probab=99.86 E-value=1.3e-20 Score=147.68 Aligned_cols=274 Identities=18% Similarity=0.216 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999753410133222233332056325676301456778887512522123200122332356778776312
Q gi|254780461|r 71 GGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFK 150 (406)
Q Consensus 71 ~~~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 150 (406)
T Consensus 22 ~~~L~~eA~~~AL~dAGi~~~~ID~----v~~G~~~~~~~~~~------------------------------~a~~~~g 67 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDEVQQ----AYVGYVYGDSTSGQ------------------------------RALYEVG 67 (391)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCE----EEEEECCCCCCCHH------------------------------HHHHHCC
T ss_conf 9999999999999982989899899----98970368750059------------------------------9999613
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCC-CC----------CCC----------------
Q ss_conf 233-33333333444433432100113456055788731345667532-22----------222----------------
Q gi|254780461|r 151 IRG-TSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMS-NL----------FDA---------------- 202 (406)
Q Consensus 151 l~G-p~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~-~~----------f~~---------------- 202 (406)
T Consensus 68 ~~g~P~~tV~~~CaSG~~Ai~~Aa~~I~sG~advvla~G~E~Ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (391)
T PRK08256 68 MTGIPVVNVNNNCSTGSTALFLARQAVASGAADCALALGFEQMQPGALGSVWDDRPSPLERHDKALAELVGFDGFPPALR 147 (391)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 36996588878761699999999999976998889996440357666566658776711224566665304443638999
Q ss_pred C-CCCCC----CC------------------CCCCCCC------------CCC-CCC--CCCCEEECCCEEEEECCCHHH
Q ss_conf 1-22334----67------------------8662232------------223-566--666413126514431122132
Q gi|254780461|r 203 M-GAMSS----HF------------------NHDPCSA------------SRP-YDS--RRDGFVISGGAAVIVLEEMER 244 (406)
Q Consensus 203 ~-~~ls~----~~------------------~~~p~~~------------~rP-Fd~--~~~G~~~gEGa~~~vLe~~~~ 244 (406)
T Consensus 148 ~~a~~a~~~~~~~g~t~e~~A~vav~~~~~a~~np~A~~~~~~t~e~v~~s~~i~~plt~~~~s~~sDGAaAvvl~See~ 227 (391)
T PRK08256 148 MFGGAGREHMQKYGTTAETFAKIGAKARRHAANNPYAQFRDEVTLEDVLASPMIWGPLTRLQCCPPTCGAAAAILCSEEF 227 (391)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECHHH
T ss_conf 99999999999978699985999999789887196101378888999823485224025764589999718999956999
Q ss_pred HCCCCCCCCCEEEEEEEECCCCC-CC---CCCHH--H-HHHHHHHHHHHH---HCCCCEEEECCCCCCCCCCCHHHHHHC
Q ss_conf 01100112320122101026521-23---44335--7-789887542100---100210221024555444200122220
Q gi|254780461|r 245 AKARGAKIYAELTGYGSTCDGDD-MV---SPSGE--G-AIRCMRQALSSV---EEPVDYINTHGTATPKGDKKEVEAIRE 314 (406)
Q Consensus 245 A~~rGa~i~a~i~g~~~~~d~~~-~~---~p~~~--g-~~~~i~~Al~~a---~~~i~~i~~hgtgt~~~D~~E~~ai~~ 314 (406)
T Consensus 228 A~~~g~~~~v~I~g~a~~~~~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGl~~~DiDv~Ei~daFa~----~~l~~le~ 303 (391)
T PRK08256 228 ARKHGLDRAVEIAAQAMTTDFPSTFDGGDMINLVGYDMTRAAAQQVYEQAGVGPEDIDVIELHDCFSA----NELLTYEA 303 (391)
T ss_pred HHHCCCCCCEEEEEEEEECCCCHHCCCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHH----HHHHHHHH
T ss_conf 98649998779999998526720014788144305640699999999984999888767642155548----89999998
Q ss_pred C-C-----------------CCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2-3-----------------554433647521--0132358999999999999987184078688888976678887379
Q gi|254780461|r 315 V-F-----------------KGNIPYIQSTKS--LTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGIPIVR 374 (406)
Q Consensus 315 ~-f-----------------~~~~~~v~s~K~--~~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~~~l~~v~ 374 (406)
T Consensus 304 lG~~~~g~~~~~~~~g~~~~~G~-~pvN~~GG~la~GhP~GatG~~~~~e~~~QLrG~a--------------g-----~ 363 (391)
T PRK08256 304 LGLCPEGEAEKFIDDGDNTYGGR-WVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA--------------G-----A 363 (391)
T ss_pred CCCCCCCCHHHHHHCCCCCCCCC-EEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH--------------C-----C
T ss_conf 19998882688986688556998-23818950864688664579999999999971102--------------0-----3
Q ss_pred CCCCCCCCCEEEEECCCCCCEEEEEEEEEC
Q ss_conf 988558835899935567773679999942
Q gi|254780461|r 375 KRIDNAKIDTVLSNSFGFGGTNATLVFRRY 404 (406)
Q Consensus 375 ~~~~~~~~~~al~~s~GfGG~n~~~vl~~~ 404 (406)
T Consensus 364 rQV--~~a~~aL~~~~G~gg~~~v~i~~r~ 391 (391)
T PRK08256 364 RQV--EGARLALQHNLGLGGACVVTLYQRA 391 (391)
T ss_pred CCC--CCCCEEEECCCCCCCEEEEEEEECC
T ss_conf 547--8700576605464500799998529