HHsearch alignment for GI: 254780461 and conserved domain: PRK13359
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional.
Probab=99.70 E-value=1.8e-16 Score=121.78 Aligned_cols=260 Identities=18% Similarity=0.263 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999997534-101332222333320563256763014567788875125221232001223323567787763
Q gi|254780461|r 70 QGGTWGHLAMQEAITD-SRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTW 148 (406)
Q Consensus 70 ~~~~l~l~aa~~Al~d-AGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 148 (406)
T Consensus 25 ~~~~L~a~~i~~~l~r~~~i~~~~Id~----Vi~G~~~~~g~~g--------------------------~n~aR~~aL~ 74 (400)
T PRK13359 25 RADDLGAVPLKALVERNRDVDWAAIDD----VIYGCANQAGEDN--------------------------RNVARMSLLL 74 (400)
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHCCE----EEEECCCCCCCCC--------------------------CCHHHHHHHH
T ss_conf 889999999999997269979899997----9998277556545--------------------------7689999997
Q ss_pred HC--CCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCC------CCC-------------------
Q ss_conf 12--233333333334444334321001134560557887313456675322------222-------------------
Q gi|254780461|r 149 FK--IRGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSN------LFD------------------- 201 (406)
Q Consensus 149 ~g--l~Gp~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~------~f~------------------- 201 (406)
T Consensus 75 aGlp~~vpa~TVnr~C~SGl~Ai~~aa~~I~~G~~dvviAGGvEsmS~~P~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 154 (400)
T PRK13359 75 AGLPHGVPGTTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLM 154 (400)
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 69998876267613211499999999999857998878851551155564003655444456652123312101368244
Q ss_pred -------CCCC----CCCCC---------------------------C---------------------CCCC-----C-
Q ss_conf -------2122----33467---------------------------8---------------------6622-----3-
Q gi|254780461|r 202 -------AMGA----MSSHF---------------------------N---------------------HDPC-----S- 216 (406)
Q Consensus 202 -------~~~~----ls~~~---------------------------~---------------------~~p~-----~- 216 (406)
T Consensus 155 ~~~~~~~~Mg~tAE~~A~~~gisRe~qD~~A~~Sh~rA~~A~~~G~f~~EIvPv~~~~~~g~~~~~~~De~~R~tt~e~L 234 (400)
T PRK13359 155 KQLYGVDSMPETAENVATDYNISRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPVVVSRDEHPRETTLEAL 234 (400)
T ss_pred HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCEEEEECCCCCCCCCHHHH
T ss_conf 54306784789999999986989999999999999999998765984025886775267786378806878666776666
Q ss_pred -CCC-CCCCCCCCE-------EECCCEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC--HHHHHHHHHHHHH
Q ss_conf -222-356666641-------31265144311221320110011232012210102652123443--3577898875421
Q gi|254780461|r 217 -ASR-PYDSRRDGF-------VISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEGAIRCMRQALS 285 (406)
Q Consensus 217 -~~r-PFd~~~~G~-------~~gEGa~~~vLe~~~~A~~rGa~i~a~i~g~~~~~d~~~~~~p~--~~g~~~~i~~Al~ 285 (406)
T Consensus 235 a~L~p~f~~~--GtvTAgNsS~~~DGAAavll~s~~~a~~~gl~p~ari~~~a~~g~-----dP~~m~~gp~~A~~k~L~ 307 (400)
T PRK13359 235 AKLKGVVRPD--GTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGV-----EPRVMGIGPAPATQKLLA 307 (400)
T ss_pred HCCCCCCCCC--CCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEC-----CHHHHHHCHHHHHHHHHH
T ss_conf 3268753456--856354378543267889986599999879980599998899982-----878853369999999999
Q ss_pred HHH---CCCCEEEECCCCCCCCCCCHHHHHHCC-----CCC--CCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 001---002102210245554442001222202-----355--4433647521--0132358999999999999987184
Q gi|254780461|r 286 SVE---EPVDYINTHGTATPKGDKKEVEAIREV-----FKG--NIPYIQSTKS--LTGHSLGAAGAQEAIYCLIMMQERF 353 (406)
Q Consensus 286 ~a~---~~i~~i~~hgtgt~~~D~~E~~ai~~~-----f~~--~~~~v~s~K~--~~GH~~gasG~~~~~~~~~~l~~g~ 353 (406)
T Consensus 308 ~agl~~~Did~~Ein----------EAFA~q~l~~~~~lg~~~d~~kvN~~GGaiAlGHP~GAsGarl~~~l~~~L~~~- 376 (400)
T PRK13359 308 RLGMTLDQFDVIELN----------EAFASQGLAVLRMLGVADDDARVNPNGGAIALGHPLGASGARLVTTALYQLHRT- 376 (400)
T ss_pred HCCCCCCCCCEEEEE----------HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH-
T ss_conf 769984568777860----------466888999999819998777489886688748880224799999999999980-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEC
Q ss_conf 078688888976678887379988558835899935567773679999942
Q gi|254780461|r 354 IGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRRY 404 (406)
Q Consensus 354 ipp~~n~~~~~~~~~~l~~v~~~~~~~~~~~al~~s~GfGG~n~~~vl~~~ 404 (406)
T Consensus 377 ---------------------------~~~~Gl~t~c~ggG~G~A~~iErv 400 (400)
T PRK13359 377 ---------------------------GGRFALCTMCIGVGQGIAIAIERV 400 (400)
T ss_pred ---------------------------CCCEEEEEECCCCCHHHEEEEEEC
T ss_conf ---------------------------999899996220133236989829