HHsearch alignment for GI: 254780461 and conserved domain: TIGR02430
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase; InterPro: IPR012793 Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0019619 protocatechuate catabolic process.
Probab=97.89 E-value=5.9e-06 Score=56.21 Aligned_cols=184 Identities=23% Similarity=0.376 Sum_probs=110.4
Q ss_pred CCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCC------CCCCCCCCCC--------------CC---
Q ss_conf 333333334444334321001134560557887313456675322------2222122334--------------67---
Q gi|254780461|r 154 TSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSN------LFDAMGAMSS--------------HF--- 210 (406)
Q Consensus 154 p~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~------~f~~~~~ls~--------------~~--- 210 (406)
T Consensus 81 ~~~t~nrlC~s~lda~~~~~ra~~~G~~~l~iaGGvesmsraP~v~Gka~~~f~r~~~~~dtt~GWrf~nP~~~~~yG~~ 160 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGLAARAIKAGEADLVIAGGVESMSRAPFVMGKADSAFSRSAKLEDTTIGWRFVNPKLKALYGVD 160 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCEEECCCCCHHHHHHHHHHHEEEHHHHCHHHHHHHCCC
T ss_conf 01456665421378999988876327643577647211203760221453101221000000000000054788650522
Q ss_pred -----------------------------------------------------CC----CCCCCCC------------C-
Q ss_conf -----------------------------------------------------86----6223222------------3-
Q gi|254780461|r 211 -----------------------------------------------------NH----DPCSASR------------P- 220 (406)
Q Consensus 211 -----------------------------------------------------~~----~p~~~~r------------P- 220 (406)
T Consensus 161 ~mp~ta~nva~~~~~~r~dqd~fa~~sq~~~~~a~~~G~~~~e~~~v~~~~~~G~~~~~~~de~~r~~t~~e~l~~l~~~ 240 (400)
T TIGR02430 161 SMPETAENVAEEFGVSREDQDAFALRSQQRTAAAQAKGFFAEEIVPVEIPQKKGEETVVDQDEHLRPETTLEALAKLKAV 240 (400)
T ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 10357899998621222345789888889899887526023240467761446840211101123423469999875431
Q ss_pred CCC-------CCCCEEECCCEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC--HHHHHHHHHHHHHHHH---
Q ss_conf 566-------6664131265144311221320110011232012210102652123443--3577898875421001---
Q gi|254780461|r 221 YDS-------RRDGFVISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEGAIRCMRQALSSVE--- 288 (406)
Q Consensus 221 Fd~-------~~~G~~~gEGa~~~vLe~~~~A~~rGa~i~a~i~g~~~~~d~~~~~~p~--~~g~~~~i~~Al~~a~--- 288 (406)
T Consensus 241 ~~~~~~vtaGnasG~n--dGa~al~~as~~~~~~~~l~~ra~~~~~a~~G-----v~P~~mG~gP~Pa~~~~l~~~~l~~ 313 (400)
T TIGR02430 241 VRADGTVTAGNASGVN--DGAAALLLASEEAVKRHGLTPRARILAAASAG-----VEPRVMGLGPVPAVRKLLARAGLSI 313 (400)
T ss_pred HCCCCEEEECCCCCCC--CHHHHHHHHHHHHHHHHCCCCHHHHEEHHHCC-----CCCCEECCCCCHHHHHHHHHHCCCH
T ss_conf 0368706514444543--01343344308899851143024300011037-----6631001357378999999725635
Q ss_pred CCCCEEEECCCCCCCCCCCHHH--HHHCCCC--CCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0021022102455544420012--2220235--54433647521--01323589999999999999871
Q gi|254780461|r 289 EPVDYINTHGTATPKGDKKEVE--AIREVFK--GNIPYIQSTKS--LTGHSLGAAGAQEAIYCLIMMQE 351 (406)
Q Consensus 289 ~~i~~i~~hgtgt~~~D~~E~~--ai~~~f~--~~~~~v~s~K~--~~GH~~gasG~~~~~~~~~~l~~ 351 (406)
T Consensus 314 ~~~d~~el-------neafaaq~la~~r~l~~~dd~~~vn~nGGaialGhPlG~sGarl~~~~~~~l~~ 375 (400)
T TIGR02430 314 EDLDVIEL-------NEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLEK 375 (400)
T ss_pred HHHCHHHH-------HHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 56021345-------667777788887751255531100567764761565463068999999999985