HHsearch alignment for GI: 254780461 and conserved domain: TIGR02445
>TIGR02445 fadA acetyl-CoA C-acyltransferase FadA; InterPro: IPR012805 This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (IPR012799 from INTERPRO). The FadBA complex is the major complex active for beta-oxidation of fatty acids in Escherichia coli.; GO: 0003988 acetyl-CoA C-acyltransferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=97.32 E-value=8.9e-05 Score=48.86 Aligned_cols=171 Identities=27% Similarity=0.463 Sum_probs=108.5
Q ss_pred CCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCC-CCCCCCCCCCCCC------------------------
Q ss_conf 333333333444433432100113456055788731345667-5322222212233------------------------
Q gi|254780461|r 153 GTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDW-TMSNLFDAMGAMS------------------------ 207 (406)
Q Consensus 153 Gp~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~-~~~~~f~~~~~ls------------------------ 207 (406)
T Consensus 80 ~~a~tv~rlCGssm~alh~~a~~imt~~~~~~~~GGvehmGhv~m~hGvd~~P~~s~~~aka~GmmGltaeml~~~hGi~ 159 (385)
T TIGR02445 80 VAAVTVNRLCGSSMQALHDAARAIMTGDAEVCLIGGVEHMGHVPMSHGVDFHPGLSKHVAKAAGMMGLTAEMLGKLHGIS 159 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCC
T ss_conf 22245554420358999988787631787579982600002110014767885145777765110234899988752122
Q ss_pred CCC-----------------------------CC---------------CCCC------CCCC-CCCCCCCEE-------
Q ss_conf 467-----------------------------86---------------6223------2223-566666413-------
Q gi|254780461|r 208 SHF-----------------------------NH---------------DPCS------ASRP-YDSRRDGFV------- 229 (406)
Q Consensus 208 ~~~-----------------------------~~---------------~p~~------~~rP-Fd~~~~G~~------- 229 (406)
T Consensus 160 re~qd~f~~rsh~~a~~at~~~~fk~ei~P~~G~~~~G~l~~~~~de~irP~tt~e~l~~l~P~f~P-~~G~vtaGtss~ 238 (385)
T TIGR02445 160 REQQDAFAARSHARAHAATLEGKFKNEIIPTEGHDADGVLKVFDYDEVIRPETTVESLAALRPAFDP-KNGTVTAGTSSA 238 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCC-CCCEEECCCCHH
T ss_conf 2345677566789999876422133202567774447623321344422750568788751213168-887573265110
Q ss_pred ECCCEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC--HHHHHHHHHHHHHHHH---CCCCEEEECCCCCCCC
Q ss_conf 1265144311221320110011232012210102652123443--3577898875421001---0021022102455544
Q gi|254780461|r 230 ISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEGAIRCMRQALSSVE---EPVDYINTHGTATPKG 304 (406)
Q Consensus 230 ~gEGa~~~vLe~~~~A~~rGa~i~a~i~g~~~~~d~~~~~~p~--~~g~~~~i~~Al~~a~---~~i~~i~~hgtgt~~~ 304 (406)
T Consensus 239 ~~dGa~~m~~ms~~~a~~lG~~~~a~~~~ma~~G-----~dP~imGyGPvPa~~~alk~aGls~~d~~~~eln------- 306 (385)
T TIGR02445 239 LSDGASAMLVMSEERAQELGVKPRARIRSMAVAG-----VDPSIMGYGPVPATQKALKRAGLSISDIDVFELN------- 306 (385)
T ss_pred HHCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC-----CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH-------
T ss_conf 1022031223215667651862000112234541-----5721003678726688898707843330023345-------
Q ss_pred CCCHHHHHHCC-----------CCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 42001222202-----------3554433647521013235899999
Q gi|254780461|r 305 DKKEVEAIREV-----------FKGNIPYIQSTKSLTGHSLGAAGAQ 340 (406)
Q Consensus 305 D~~E~~ai~~~-----------f~~~~~~v~s~K~~~GH~~gasG~~ 340 (406)
T Consensus 307 ---eafaaq~lP~~kdl~~~~~~~ek~-nl~GGaialGhP~GCsGar 349 (385)
T TIGR02445 307 ---EAFAAQALPVLKDLGLLDKMDEKV-NLNGGAIALGHPLGCSGAR 349 (385)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCHHH
T ss_conf ---567765303677778998763321-1467625406765665047