HHsearch alignment for GI: 254780461 and conserved domain: TIGR02445

>TIGR02445 fadA acetyl-CoA C-acyltransferase FadA; InterPro: IPR012805 This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (IPR012799 from INTERPRO). The FadBA complex is the major complex active for beta-oxidation of fatty acids in Escherichia coli.; GO: 0003988 acetyl-CoA C-acyltransferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=97.32  E-value=8.9e-05  Score=48.86  Aligned_cols=171  Identities=27%  Similarity=0.463  Sum_probs=108.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCC-CCCCCCCCCCCCC------------------------
Q ss_conf             333333333444433432100113456055788731345667-5322222212233------------------------
Q gi|254780461|r  153 GTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDW-TMSNLFDAMGAMS------------------------  207 (406)
Q Consensus       153 Gp~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~-~~~~~f~~~~~ls------------------------  207 (406)
T Consensus        80 ~~a~tv~rlCGssm~alh~~a~~imt~~~~~~~~GGvehmGhv~m~hGvd~~P~~s~~~aka~GmmGltaeml~~~hGi~  159 (385)
T TIGR02445        80 VAAVTVNRLCGSSMQALHDAARAIMTGDAEVCLIGGVEHMGHVPMSHGVDFHPGLSKHVAKAAGMMGLTAEMLGKLHGIS  159 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCC
T ss_conf             22245554420358999988787631787579982600002110014767885145777765110234899988752122


Q ss_pred             CCC-----------------------------CC---------------CCCC------CCCC-CCCCCCCEE-------
Q ss_conf             467-----------------------------86---------------6223------2223-566666413-------
Q gi|254780461|r  208 SHF-----------------------------NH---------------DPCS------ASRP-YDSRRDGFV-------  229 (406)
Q Consensus       208 ~~~-----------------------------~~---------------~p~~------~~rP-Fd~~~~G~~-------  229 (406)
T Consensus       160 re~qd~f~~rsh~~a~~at~~~~fk~ei~P~~G~~~~G~l~~~~~de~irP~tt~e~l~~l~P~f~P-~~G~vtaGtss~  238 (385)
T TIGR02445       160 REQQDAFAARSHARAHAATLEGKFKNEIIPTEGHDADGVLKVFDYDEVIRPETTVESLAALRPAFDP-KNGTVTAGTSSA  238 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCC-CCCEEECCCCHH
T ss_conf             2345677566789999876422133202567774447623321344422750568788751213168-887573265110


Q ss_pred             ECCCEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC--HHHHHHHHHHHHHHHH---CCCCEEEECCCCCCCC
Q ss_conf             1265144311221320110011232012210102652123443--3577898875421001---0021022102455544
Q gi|254780461|r  230 ISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEGAIRCMRQALSSVE---EPVDYINTHGTATPKG  304 (406)
Q Consensus       230 ~gEGa~~~vLe~~~~A~~rGa~i~a~i~g~~~~~d~~~~~~p~--~~g~~~~i~~Al~~a~---~~i~~i~~hgtgt~~~  304 (406)
T Consensus       239 ~~dGa~~m~~ms~~~a~~lG~~~~a~~~~ma~~G-----~dP~imGyGPvPa~~~alk~aGls~~d~~~~eln-------  306 (385)
T TIGR02445       239 LSDGASAMLVMSEERAQELGVKPRARIRSMAVAG-----VDPSIMGYGPVPATQKALKRAGLSISDIDVFELN-------  306 (385)
T ss_pred             HHCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC-----CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH-------
T ss_conf             1022031223215667651862000112234541-----5721003678726688898707843330023345-------


Q ss_pred             CCCHHHHHHCC-----------CCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             42001222202-----------3554433647521013235899999
Q gi|254780461|r  305 DKKEVEAIREV-----------FKGNIPYIQSTKSLTGHSLGAAGAQ  340 (406)
Q Consensus       305 D~~E~~ai~~~-----------f~~~~~~v~s~K~~~GH~~gasG~~  340 (406)
T Consensus       307 ---eafaaq~lP~~kdl~~~~~~~ek~-nl~GGaialGhP~GCsGar  349 (385)
T TIGR02445       307 ---EAFAAQALPVLKDLGLLDKMDEKV-NLNGGAIALGHPLGCSGAR  349 (385)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCHHH
T ss_conf             ---567765303677778998763321-1467625406765665047