HHsearch alignment for GI: 254780461 and conserved domain: cd00833

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=100.00  E-value=0  Score=661.60  Aligned_cols=386  Identities=28%  Similarity=0.410  Sum_probs=338.6

Q ss_pred             CCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEECC--CCCCCCCC----------EEECC----EECCCHHHC-CCHHH
Q ss_conf             728999332670889899999999981887623367--75754785----------12454----014786684-89899
Q gi|254780461|r    2 RRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSE--DFAKFGFR----------CQVWG----KPLLNAAEL-IDRKA   64 (406)
Q Consensus         2 ~rV~ItG~G~v~p~G~~~~e~w~~L~~G~sgi~~~~--~~~~~~~~----------~~~~g----~~~~~~~~~-~~~~~   64 (406)
T Consensus         1 e~IaItG~g~~~P~g~~~~~fw~~L~~G~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~e   80 (421)
T cd00833           1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPRE   80 (421)
T ss_pred             CCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEECCCHHHCCHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCHHH
T ss_conf             98999810678989999999999998299877528957758432578643468865430345378342688665999999


Q ss_pred             HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             97249999999999999753410133222233332056325676301456778887512522123200122332356778
Q gi|254780461|r   65 MRFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASAT  144 (406)
Q Consensus        65 ~r~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~  144 (406)
T Consensus        81 a~~mdp~~rl~L~~a~eAl~dAG~~~~~~~~~r~GV~iG~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~a~~  152 (421)
T cd00833          81 AEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLE-------LLA-RDPDEIDAYAATGTSRAFLANR  152 (421)
T ss_pred             HHHHCHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHH-------HHH-CCCCCCCCCCCCCCCHHHHHHH
T ss_conf             98719999999999999997528983464886349996666664788-------974-2756578530135431179999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             77631223333333333444433432100113456055788731345-66753222222122334678662232223566
Q gi|254780461|r  145 LSTWFKIRGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQED-LDWTMSNLFDAMGAMSSHFNHDPCSASRPYDS  223 (406)
Q Consensus       145 is~~~gl~Gp~~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~  223 (406)
T Consensus       153 is~~~~~~Gp~~~v~tACaSsl~Ai~~A~~~i~~G~~d~ai~Gg~~~~~~~~~~~~~~~~~~ls------~~~~~rpFD~  226 (421)
T cd00833         153 ISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS------PDGRCRPFDA  226 (421)
T ss_pred             HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHCCCCC------CCCCCCCCCC
T ss_conf             9999689996003353627999999999999857994354412000315868999986357868------9998567888


Q ss_pred             CCCCEEECCCEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCC--CCCCCCHHHHHHHHHHHHHHH---HCCCCEEEECC
Q ss_conf             6664131265144311221320110011232012210102652--123443357789887542100---10021022102
Q gi|254780461|r  224 RRDGFVISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGD--DMVSPSGEGAIRCMRQALSSV---EEPVDYINTHG  298 (406)
Q Consensus       224 ~~~G~~~gEGa~~~vLe~~~~A~~rGa~i~a~i~g~~~~~d~~--~~~~p~~~g~~~~i~~Al~~a---~~~i~~i~~hg  298 (406)
T Consensus       227 ~~~G~v~gEGa~~lvLe~~~~A~~~g~~I~a~i~G~g~~~dg~~~~~~~P~~~~~~~~~~~al~~agi~~~~i~yieaHg  306 (421)
T cd00833         227 DADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHG  306 (421)
T ss_pred             CCCCCCCCCCEEEECCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf             99986555751354368789998769947999989998068977788887566899999999997299944120899744


Q ss_pred             CCCCCCCCCHHHHHHCCCCCC-----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--C
Q ss_conf             455544420012222023554-----433647521013235899999999999998718407868888897667888--7
Q gi|254780461|r  299 TATPKGDKKEVEAIREVFKGN-----IPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGI--P  371 (406)
Q Consensus       299 tgt~~~D~~E~~ai~~~f~~~-----~~~v~s~K~~~GH~~gasG~~~~~~~~~~l~~g~ipp~~n~~~~~~~~~~l--~  371 (406)
T Consensus       307 tgT~~gD~~E~~ai~~~f~~~~~~~~~~~v~S~Ks~~GH~~~AaG~~~~i~~~lal~~~~iPpt~n~~~~~p~~~~~~~~  386 (421)
T cd00833         307 TGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESP  386 (421)
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             76866699999999999612577778630235434534335767999999999998559828989989999889844476


Q ss_pred             -CCCCCCCC----CCCCEEEEECCCCCCEEEEEEE
Q ss_conf             -37998855----8835899935567773679999
Q gi|254780461|r  372 -IVRKRIDN----AKIDTVLSNSFGFGGTNATLVF  401 (406)
Q Consensus       372 -~v~~~~~~----~~~~~al~~s~GfGG~n~~~vl  401 (406)
T Consensus       387 ~~v~~~~~~w~~~~~~r~a~vnsfgfGG~Na~lvl  421 (421)
T cd00833         387 LRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL  421 (421)
T ss_pred             EEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEC
T ss_conf             35107772488889844999906158874579979