HHsearch alignment for GI: 254780461 and conserved domain: pfam00195
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=97.64 E-value=6.1e-05 Score=49.85 Aligned_cols=184 Identities=14% Similarity=0.117 Sum_probs=104.2
Q ss_pred EEEEEEEEECCCC-CCHHHHHHHHH---CCCC--CC-EECC-CCCCCCCCEEECCEE--------CCCHH--HCCCHHHH
Q ss_conf 8999332670889-89999999998---1887--62-3367-757547851245401--------47866--84898999
Q gi|254780461|r 4 VAVTGMGIVSSIG-NNVSEVAISLR---EARS--GI-TFSE-DFAKFGFRCQVWGKP--------LLNAA--ELIDRKAM 65 (406)
Q Consensus 4 V~ItG~G~v~p~G-~~~~e~w~~L~---~G~s--gi-~~~~-~~~~~~~~~~~~g~~--------~~~~~--~~~~~~~~ 65 (406)
T Consensus 17 A~Il~IgTA~Pp~~~~Q~~~~d~~~~~~~~~~~~~~k~~l~ri~~~sgI~~R~~vl~~e~~~~~P~~~~~~~ps~~~R~~ 96 (228)
T pfam00195 17 ATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMVLTEEILKENPELCTEMAPSLDARQD 96 (228)
T ss_pred EEEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 69999997189955248999999999734432426789999899846988315861768761495510256999899999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 72499999999999997534101332222333320563256763014567788875125221232001223323567787
Q gi|254780461|r 66 RFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATL 145 (406)
Q Consensus 66 r~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~r~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~i 145 (406)
T Consensus 97 ~~~~~a~~La~~Aa~~AL~~aG~~~~dIt----hlv~vt~TG~~~P----------------------------g~d~~l 144 (228)
T pfam00195 97 IAVVEVPKLGKEAALKAIKEWGQPKSKIT----HLVFCTTSGVDMP----------------------------GADYQL 144 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHCC----EEEEECCCCCCCC----------------------------CHHHHH
T ss_conf 99999999999999999999588988999----9999947999887----------------------------478999
Q ss_pred HHHHCCCCCC---CCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7631223333---3333334444334321001134560557887313456675322222212233467866223222356
Q gi|254780461|r 146 STWFKIRGTS---YSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPCSASRPYD 222 (406)
Q Consensus 146 s~~~gl~Gp~---~ti~~acaSgl~Al~~A~~~L~~G~~D~aivGg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd 222 (406)
T Consensus 145 ~~~LGL~~~v~R~~i~~~GC~gg~~gL~~A~~~~~~~p~~~VLvv~~Elcs----l~f~~-----------------~~~ 203 (228)
T pfam00195 145 TKLLGLRPSVKRVMLYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITA----VTFRG-----------------PSE 203 (228)
T ss_pred HHHCCCCCCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHH----EEECC-----------------CCC
T ss_conf 998298987211141145416489999999999982999879999824011----03048-----------------876
Q ss_pred CCCC----CEEECCCEEEEECC
Q ss_conf 6666----41312651443112
Q gi|254780461|r 223 SRRD----GFVISGGAAVIVLE 240 (406)
Q Consensus 223 ~~~~----G~~~gEGa~~~vLe 240 (406)
T Consensus 204 ~~~~~lV~~aLFgDGAaAvvv~ 225 (228)
T pfam00195 204 THLDSLVGQALFGDGAAAVIIG 225 (228)
T ss_pred CCHHHHHHHHHCCCCCEEEEEE
T ss_conf 5677773441202751799971