RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780461|ref|YP_003064874.1| 3-oxoacyl-(acyl carrier
protein) synthase I [Candidatus Liberibacter asiaticus str. psy62]
         (406 letters)



>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I;
           Reviewed.
          Length = 406

 Score =  719 bits (1858), Expect = 0.0
 Identities = 263/406 (64%), Positives = 317/406 (78%)

Query: 1   MRRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGKPLLNAAELI 60
           MRRV +TG+GIVSSIGNN  EV  SLRE RSGITFS +FA+ G R QVWG   L+   LI
Sbjct: 1   MRRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVKLDPTGLI 60

Query: 61  DRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTR 120
           DRK MRF+     + +LAM++AI D+ L   ++++ RTGLIAGSGG ST+  V AAD  R
Sbjct: 61  DRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMR 120

Query: 121 EHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQSGK 180
                +R+GP+AV KAM+ST SA L+T FKI+G +YSISSACATSAHCIGNA E IQ GK
Sbjct: 121 GPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGK 180

Query: 181 QDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAAVIVLE 240
           QDI+FAGG E+LDW MS LFDAMGA+S+ +N  P  ASR YD+ RDGFVI+GG  V+V+E
Sbjct: 181 QDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVVE 240

Query: 241 EMERAKARGAKIYAELTGYGSTCDGDDMVSPSGEGAIRCMRQALSSVEEPVDYINTHGTA 300
           E+E A ARGAKIYAE+ GYG+T DG DMV+PSGEGA+RCM+ AL++V+ P+DYINTHGT+
Sbjct: 241 ELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVDTPIDYINTHGTS 300

Query: 301 TPKGDKKEVEAIREVFKGNIPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQERFIGESKNI 360
           TP GD KE+ AIREVF    P I +TKSLTGHSLGAAG QEAIY L+MM+  FI  S NI
Sbjct: 301 TPVGDVKELGAIREVFGDKSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANI 360

Query: 361 EEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRRYKG 406
           EE+DP+  G+PIV +  DNA++ TV+SNSFGFGGTNATLVFRRYKG
Sbjct: 361 EELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRYKG 406


>gnl|CDD|180925 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 411

 Score =  372 bits (959), Expect = e-104
 Identities = 179/419 (42%), Positives = 247/419 (58%), Gaps = 22/419 (5%)

Query: 1   MRRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGK-PLLNAAEL 59
            RRV VTG+G VS +GN+V     +L   +SGI     F       ++ G+    N  + 
Sbjct: 1   KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDY 60

Query: 60  IDRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLT 119
           + RK  R + +   +G  A ++A+ D+ L+  E   +R G+I GSG    + I       
Sbjct: 61  MSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITL 120

Query: 120 REHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQSG 179
            E    RR+ PF VP A+ + A+  +S  +  +G ++SI +ACAT AH IG+AA LI  G
Sbjct: 121 LEK-GPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYG 179

Query: 180 KQDIMFAGGQEDLDWTMSNL----FDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAA 235
             D+M AGG E     ++ L    F A  A+S+  N DP  ASRP+D  RDGFV+  GA 
Sbjct: 180 DADVMVAGGAEA---AITPLGIAGFAAARALSTR-NDDPERASRPFDKDRDGFVMGEGAG 235

Query: 236 VIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEGAIRCMRQALS----SVEE 289
           ++VLEE+E AKARGAKIYAE+ GYG T D   M +P+  GEGA R M+ AL     + E+
Sbjct: 236 ILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPED 295

Query: 290 PVDYINTHGTATPKGDKKEVEAIREVFKGNIPY---IQSTKSLTGHSLGAAGAQEAIYCL 346
            +DYIN HGT+TP GDK E +AI+ VF G   Y   + STKS+TGH LGAAGA EAI+ +
Sbjct: 296 -IDYINAHGTSTPAGDKAETQAIKRVF-GEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSV 353

Query: 347 IMMQERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRRYK 405
           + ++++ I  + N++  D E   +  V       KID  LSNSFGFGGTNA+LVF+RY+
Sbjct: 354 LAIRDQVIPPTINLDNPDEECD-LDYVPNEARERKIDYALSNSFGFGGTNASLVFKRYE 411


>gnl|CDD|163158 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II.
           FabB sequences should fall well below the noise cutoff
           of this model.
          Length = 407

 Score =  363 bits (934), Expect = e-101
 Identities = 173/416 (41%), Positives = 240/416 (57%), Gaps = 24/416 (5%)

Query: 2   RRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGK-PLLNAAELI 60
           RRV VTG+G V+ +GN V E   +L   +SGI     F       ++ G+    +  + I
Sbjct: 1   RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYI 60

Query: 61  DRKAMRFLSQGGTWGHLAM---QEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAAD 117
           D+K  R +     +   A+   +EA+ DS L   E   ER G+I GSG    + I     
Sbjct: 61  DKKEARRMD---RFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHI 117

Query: 118 LTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQ 177
           +  E    RR+ PF +P ++ + A+  +S  +  +G ++++ +ACAT  H IG+A  LIQ
Sbjct: 118 VLLEK-GPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQ 176

Query: 178 SGKQDIMFAGGQEDLDWTMSNL----FDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGG 233
            G  D+M AGG E     ++ L    F AM A+S+  N DP  ASRP+D  RDGFV+  G
Sbjct: 177 RGDADVMIAGGAEA---AITPLGIAGFAAMKALST-RNDDPEKASRPFDKDRDGFVMGEG 232

Query: 234 AAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEGAIRCMRQALSSVE--- 288
           A V+VLEE+E AKARGAKIYAE+ GYG + D   + +P+  GEGA R MR AL       
Sbjct: 233 AGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINP 292

Query: 289 EPVDYINTHGTATPKGDKKEVEAIREVFKGNIP--YIQSTKSLTGHSLGAAGAQEAIYCL 346
           E VDYIN HGT+TP GDK E +AI+ VF  +     + STKS+TGH LGAAGA EAI+ +
Sbjct: 293 EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTV 352

Query: 347 IMMQERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFR 402
           + +++  +  + N++  DPE   +  V       KID  LSNSFGFGG NA+LVF+
Sbjct: 353 LAIRDGVVPPTINLDNPDPECD-LDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407


>gnl|CDD|180532 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 424

 Score =  310 bits (797), Expect = 3e-85
 Identities = 150/423 (35%), Positives = 219/423 (51%), Gaps = 18/423 (4%)

Query: 1   MRRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWG---------K 51
            +R+ VTGMG VS +G  V      L   +SGI    DF       ++ G         +
Sbjct: 3   KKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAE 62

Query: 52  PLLNAAELIDRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITH-ERTGLIAGSGGPSTK 110
              +    +D K  R + +   +   A +EA+  +   P  +   ERT  I GSG     
Sbjct: 63  AGFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFP 122

Query: 111 CIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIG 170
            I  A          RR+ PF +P  +++ A+  +S  +  +G   +  +ACA     IG
Sbjct: 123 AIAEAVRTLDSR-GPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIG 181

Query: 171 NAAELIQSGKQDIMFAGGQEDLDWTMS-NLFDAMGAMSSHFNHDPCSASRPYDSRRDGFV 229
           +AA LI+SG+ D+   GG E     +S   F A  A+S+ FN  P  ASRP+D  RDGFV
Sbjct: 182 DAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDGFV 241

Query: 230 ISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSP--SGEGAIRCMRQALSSV 287
           +  GA ++V+E +E A ARGA   AEL GYG++ D   M +    GEGA R M  AL   
Sbjct: 242 MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQA 301

Query: 288 ---EEPVDYINTHGTATPKGDKKEVEAIREVFK-GNIPYIQSTKSLTGHSLGAAGAQEAI 343
               E V ++N H T+TP GD  EV AI++VF   +   + STKS TGH LGAAG  EAI
Sbjct: 302 GIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAI 361

Query: 344 YCLIMMQERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRR 403
           + ++ ++++    + N+E  DP  +G+ +V  +     +D  LSN FGFGG NA+++FRR
Sbjct: 362 FTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421

Query: 404 YKG 406
           ++ 
Sbjct: 422 WEP 424


>gnl|CDD|185415 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase;
           Provisional.
          Length = 421

 Score =  307 bits (787), Expect = 5e-84
 Identities = 154/422 (36%), Positives = 212/422 (50%), Gaps = 29/422 (6%)

Query: 11  IVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGKPLLNA-------------A 57
           +V+ +G        +L   +SGI    +F KF   C    K L N               
Sbjct: 1   VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ 60

Query: 58  ELIDRKAMRFLSQGGTWGHLAM---QEAITDSRLQPC-EITHERTGLIAGSGGPSTKCIV 113
              D        +     H AM   +EA+ D++L    E   ER G+  GSG  S   + 
Sbjct: 61  SEFDPSDFAPTKRESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLT 120

Query: 114 SAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAA 173
                  E     R+ P+ +PK + + A+  ++   K++G S S  +ACAT AHCIG A 
Sbjct: 121 DEMKTLYEK-GHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIGEAF 179

Query: 174 ELIQSGKQDIMFAGGQEDLDWTMSNL-FDAMGAMSSHFNHDPCSASRPYDSRRDGFVISG 232
             I+ G+ DIM  GG E     +S   F  M A+ + +N DP  ASRP+D  R GFV+  
Sbjct: 180 RWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFVMGE 239

Query: 233 GAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSP--SGEGAIRCMRQALSSVEEP 290
           GA ++VLEE+E A  RGAKIYAE+ GYGS+ D   + +P   G GA RCM  AL      
Sbjct: 240 GAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANI 299

Query: 291 ----VDYINTHGTATPKGDKKEVEAIREVFKGNIP---YIQSTKSLTGHSLGAAGAQEAI 343
               VDY+N H T+TP GDK E++AI++VF  +     Y+ STK   GH LGAAGA E+I
Sbjct: 300 NINDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESI 359

Query: 344 YCLIMMQERFIGESKNIEEIDPE-FKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFR 402
             ++ + E+ I  + N+E  D E    +   +       ID VLS SFGFGG N  L+F 
Sbjct: 360 VTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419

Query: 403 RY 404
           +Y
Sbjct: 420 KY 421


>gnl|CDD|181424 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 406

 Score =  282 bits (724), Expect = 9e-77
 Identities = 154/422 (36%), Positives = 227/422 (53%), Gaps = 34/422 (8%)

Query: 1   MRRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGK-------PL 53
           M+RV VTG+G+++S+G N      ++     GI     F    F  Q+ G+        +
Sbjct: 1   MKRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEV 60

Query: 54  LNAAELIDRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSG--GPSTKC 111
           ++  E+  +KA RF+  G      A +EA+ D+   P E+  ER G+ + SG  G     
Sbjct: 61  MDPKEV--KKADRFIQLGLK----AAREAMKDAGFLPEELDAERFGVSSASGIGGLPN-- 112

Query: 112 IVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGN 171
            +    +       R+I PF +P A+ +     +S    ++G + S  +ACA   H I  
Sbjct: 113 -IEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIE 171

Query: 172 AAELIQSGKQDIMFAGGQEDLDWTMSNL----FDAMGAMSSHFNHDPCSASRPYDSRRDG 227
           A + I  G  D M   G E     +  +    F AM A+S+  N DP  ASRP+D  RDG
Sbjct: 172 AVKTIMLGGADKMLVVGAES---AICPVGIGGFAAMKALSTR-NDDPKKASRPFDKDRDG 227

Query: 228 FVISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPSGEGAIRCMRQALSSV 287
           FV+  GA  +VLEE E AK RGAKIYAE+ G+G + D + + SP+ EG +R M+ AL   
Sbjct: 228 FVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMA 287

Query: 288 EEP-VDYINTHGTATPKGDKKEVEAIREVF--KGNIPYIQSTKSLTGHSLGAAGAQEAIY 344
             P +DYIN HGT+TP  DK E  A++E+F  K  +P + STK   GH LGAAGA EA+ 
Sbjct: 288 GNPKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVI 347

Query: 345 CLIMMQERFIGESKNIEEIDPE--FKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFR 402
            ++ M++  +  + N E  DPE     IP V ++   A+++ V+SNSFGFGGTN  ++F+
Sbjct: 348 SIMAMRDGILPPTINQETPDPECDLDYIPNVARK---AELNVVMSNSFGFGGTNGVVIFK 404

Query: 403 RY 404
           + 
Sbjct: 405 KV 406


>gnl|CDD|178430 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase.
          Length = 437

 Score =  278 bits (713), Expect = 2e-75
 Identities = 165/435 (37%), Positives = 223/435 (51%), Gaps = 42/435 (9%)

Query: 2   RRVAVTGMGIVSSIGNNVSEVAISLREARSGI-TFSEDFAKFGFRCQVWGKPLLN----- 55
           RRV VTG+G+V+ +G  V      L     G+   ++D  K     +      L+     
Sbjct: 6   RRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSR 65

Query: 56  ----------------AAELIDRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITH-ERT 98
                              L  R + RF+     +   A  EA++D+R  P E    ERT
Sbjct: 66  VAALVPRGTGPGDFDEELWLNSRSSSRFIG----YALCAADEALSDARWLPSEDEAKERT 121

Query: 99  GLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSI 158
           G+  G G  S   I+ AA L  E    RR+ PF VP+ + + A+  +S  +  +G +++ 
Sbjct: 122 GVSIGGGIGSITDILEAAQLICEK-RLRRLSPFFVPRILINMAAGHVSIRYGFQGPNHAA 180

Query: 159 SSACATSAHCIGNAAELIQSGKQDIMFAGGQED-LDWTMSNLFDAMGAMSSHFNHDPCSA 217
            +ACAT AH IG+A  +IQ G  D+M AGG E  +D      F    A+S+ FN  P  A
Sbjct: 181 VTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEA 240

Query: 218 SRPYDSRRDGFVISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEG 275
           SRP+D  RDGFVI  GA V+VLEE+E AK RGAKIYAE+ GYG + D   +  P   G G
Sbjct: 241 SRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRG 300

Query: 276 AIRCMRQAL-SSVEEP--VDYINTHGTATPKGDKKEVEAIREVFKGNIPY----IQSTKS 328
           A+  M +AL  S   P  VDY+N H T+TP GD  E  AI+ VF  +         STK 
Sbjct: 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKG 360

Query: 329 LTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKG--IPIVRKRIDNAKIDTVL 386
            TGH LGAAGA EAI+ ++ +       + N+E  DP F    +P+   +     I   L
Sbjct: 361 ATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAML--IRAAL 418

Query: 387 SNSFGFGGTNATLVF 401
           SNSFGFGGTNA+L+F
Sbjct: 419 SNSFGFGGTNASLLF 433


>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 405

 Score =  264 bits (678), Expect = 2e-71
 Identities = 140/410 (34%), Positives = 209/410 (50%), Gaps = 13/410 (3%)

Query: 1   MRRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKF-GFRCQVWGKPLLNAA-- 57
           MRRV VTGMG V+++G +   +A  L+  R+ +    ++ ++ G   ++   P+ +    
Sbjct: 1   MRRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRL-AAPIDDFELP 59

Query: 58  ELIDRKAMRFLSQGGTWGHLAMQEAITDSRL--QPCEITHERTGLIAGSGGPSTKCIVSA 115
               RK +R + +       A + A+ D+ L   P  +T  R G+  GS   ST  I + 
Sbjct: 60  AHYTRKKIRSMGRVSLMATRASELALEDAGLLGDPI-LTDGRMGIAYGSSTGSTDPIGAF 118

Query: 116 ADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAEL 175
             +     S   I      + M  T +  +  +F ++G     SSAC + +  IG A E 
Sbjct: 119 GTML-LEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEA 177

Query: 176 IQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAA 235
           I+ G Q +M AGG E+L  T + +FD + A S+  N  P    RP+D+ RDG VI  GA 
Sbjct: 178 IKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTR-NDAPELTPRPFDANRDGLVIGEGAG 236

Query: 236 VIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPSGEGAIRCMRQALSSVE---EPVD 292
            +VLEE+E AKARGA IYAE+ G+G+  DG  +  P  E     M  AL       E + 
Sbjct: 237 TLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIG 296

Query: 293 YINTHGTATPKGDKKEVEAIREVFKGNIPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQER 352
           Y+N HGTAT +GD  E +A   VF   +P I S KS  GH+LGA GA EA   + MM E 
Sbjct: 297 YVNAHGTATDRGDIAESQATAAVFGARMP-ISSLKSYFGHTLGACGALEAWMSIEMMNEG 355

Query: 353 FIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFR 402
           +   + N+ ++DP    +  +         + V+SN+F FGG N +L+F+
Sbjct: 356 WFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405


>gnl|CDD|178384 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II.
          Length = 540

 Score =  241 bits (615), Expect = 4e-64
 Identities = 160/423 (37%), Positives = 225/423 (53%), Gaps = 30/423 (7%)

Query: 2   RRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDF--AKF---------GFRCQVWG 50
           RRV VTGMG+VS +G++      +L E  SGI+  E F  ++F          F    W 
Sbjct: 129 RRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWV 188

Query: 51  KPLLNAAELIDRKAMRFLSQGGTWGHLAMQEA-ITDSRLQPCEITHERTGLIAGSGGPST 109
            P L+      ++  +F+    T G  A+ +  IT+  ++  E+   + G++ GS     
Sbjct: 189 APKLS------KRMDKFMLYLLTAGKKALADGGITEDVMK--ELDKTKCGVLIGSAMGGM 240

Query: 110 KCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCI 169
           K    A +  R   S R++ PF VP A ++  SA L+      G +YSIS+ACATS  CI
Sbjct: 241 KVFNDAIEALR--ISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 298

Query: 170 GNAAELIQSGKQDIMFAGGQEDLDWTMS-NLFDAMGAMSSHFNHDPCSASRPYDSRRDGF 228
            NAA  I  G+ D+M  GG +     +    F A  A+S   N DP  ASRP+D  RDGF
Sbjct: 299 LNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQR-NDDPTKASRPWDMNRDGF 357

Query: 229 VISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPSGEGA--IRCMRQALSS 286
           V+  GA V++LEE+E AK RGA IYAE  G   TCD   M  P  EGA  I C+ +AL+ 
Sbjct: 358 VMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQ 417

Query: 287 V---EEPVDYINTHGTATPKGDKKEVEAIREVFKGNIPY-IQSTKSLTGHSLGAAGAQEA 342
               +E V+YIN H T+T  GD KE +A+   F  N    + STKS+ GH LGAAGA EA
Sbjct: 418 SGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEA 477

Query: 343 IYCLIMMQERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFR 402
           I  +  ++  ++  + N+E  +       +V  + +   I   LSNSFGFGG N++++F 
Sbjct: 478 IATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFA 537

Query: 403 RYK 405
            YK
Sbjct: 538 PYK 540


>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein
           synthase; Validated.
          Length = 410

 Score =  239 bits (611), Expect = 1e-63
 Identities = 139/423 (32%), Positives = 196/423 (46%), Gaps = 33/423 (7%)

Query: 1   MRRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGK--PLLNA-- 56
           M  V VTG+G+VS+IG      A +L   R          +        G     + A  
Sbjct: 1   MDEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAEL 60

Query: 57  -----AELIDRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLI-AGSGGPSTK 110
                 E +D K +R  S        A +EA  D+ L P  +  +R GL+  GS      
Sbjct: 61  DSLALPERLDAKLLRRASLSAQAALAAAREAWRDAALGP--VDPDRIGLVVGGSN----- 113

Query: 111 CIVSAADLTREHCSTRRIGPFAVPKA----MSSTASATLSTWFKIRGTSYSISSACATSA 166
             +   +    H + R    F  P      M +      S  F IRG  +++  A A+  
Sbjct: 114 --LQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQ 171

Query: 167 HCIGNAAELIQSGKQDIMFA-GGQEDLDWTMSNLFDAMGAM-SSHFNHDPCSASRPYDSR 224
             +  AA L+QSG  D   A G   DL +       ++GAM S  F  +P +A RP+D  
Sbjct: 172 LAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQD 231

Query: 225 RDGFVISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPSGEGAIRCMRQAL 284
           RDGF+       +VLE  E A+ RGA+ YA+L G+    D +    PS EG +R +R AL
Sbjct: 232 RDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAAL 291

Query: 285 SSVE---EPVDYINTHGTATPKGDKKEVEAIREVFKGNIPYIQSTKSLTGHSLGAAGAQE 341
                  E +DY+N HGT +P GD+ E+ A+      +  +I +TKSLTGH L AAG  E
Sbjct: 292 RRAGLGPEDIDYVNPHGTGSPLGDETELAALFASGLAH-AWINATKSLTGHGLSAAGIVE 350

Query: 342 AIYCLIMMQERFIGESKNIEE-IDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLV 400
            I  L+ M+  F+  S+N++E ID  F+    V    ++A+I   LS SFGFGG N  LV
Sbjct: 351 LIATLLQMRAGFLHPSRNLDEPIDERFR---WVGSTAESARIRYALSLSFGFGGINTALV 407

Query: 401 FRR 403
             R
Sbjct: 408 LER 410


>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 414

 Score =  229 bits (586), Expect = 8e-61
 Identities = 154/416 (37%), Positives = 222/416 (53%), Gaps = 20/416 (4%)

Query: 2   RRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGK-PLLNAAELI 60
           RRV VTGMG++S +GN V     +L   +SGI   E F    F  +  G     N  E +
Sbjct: 4   RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYM 63

Query: 61  DRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTR 120
            +K  R +     +G  A  +A+ DS L+  E    R G+  GSG      I +      
Sbjct: 64  SKKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALV 123

Query: 121 EHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQSGK 180
           E    R++ PF VP  + +  +  LS    +RG + +IS+AC T  H IG+AA +I  G 
Sbjct: 124 EK-GPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGD 182

Query: 181 QDIMFAGGQEDLDWTMS-NLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAAVIVL 239
            D M AGG E     +    F A  A+S+  N +P  ASRP+D  RDGFV+  GA ++VL
Sbjct: 183 ADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGMMVL 241

Query: 240 EEMERAKARGAKIYAELTGYGSTCDGDDMVSPS--GEGAIRCMRQALSSVE---EPVDYI 294
           EE E AKARGAKIYAEL G+G + D   M SPS  G G    M  A+       E + Y+
Sbjct: 242 EEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYV 301

Query: 295 NTHGTATPKGDKKEVEAIREVF---KGNIPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQE 351
           N HGT+TP GD  E++ I+            + STKS+TGH LGAAG+ EAI  ++ + +
Sbjct: 302 NAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVD 361

Query: 352 RFIGESKNIEEIDPE----FKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRR 403
           + +  + N++  DPE       +P   +++++  ++  + NSFGFGGTN +L+F++
Sbjct: 362 QIVPPTINLD--DPEEGLDIDLVPHTARKVES--MEYAICNSFGFGGTNGSLIFKK 413


>gnl|CDD|181166 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 418

 Score =  207 bits (528), Expect = 5e-54
 Identities = 129/414 (31%), Positives = 194/414 (46%), Gaps = 22/414 (5%)

Query: 4   VAVTGMGIVSSIGNNVSEVAISLREARSGI-TFSEDF-AKFGFRCQVWGKPLLNAAELID 61
           V VTG+ + +++  +       L + +SGI T  + F  +F    ++ G  L      + 
Sbjct: 14  VVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLT 73

Query: 62  RKAMRFLSQGGTWGHLAMQEAITDSRL-----QPCEITHERTGLIAGSGGPSTKCIVSAA 116
           R  +R +S      +L     +   R+      P E+   R  +  G+G  S + +V A 
Sbjct: 74  RVELRRMS------YLQRMSTVLGRRVWENAGSP-EVDTNRLMVSIGTGLGSAEELVFAY 126

Query: 117 DLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELI 176
           D  R     R + P AV   M +  +A +      +    +  SACA+ +  I  A   I
Sbjct: 127 DDMRAR-GLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQI 185

Query: 177 QSGKQDIMFAGGQED-LDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAA 235
             G+ DI   GG E  ++      F  M  + S  N DP  A RP+D  RDGFV   G A
Sbjct: 186 VLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGA 245

Query: 236 VIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVS--PSGEGAIRCMRQALSSV---EEP 290
           ++V+E  E AKARGA I A + G   T DG  MV+  P+GE A   M +A+         
Sbjct: 246 LMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGD 305

Query: 291 VDYINTHGTATPKGDKKEVEAIREVFKGNIPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQ 350
           +D++N H T T  GD  E +AI     G+ P + + KS  GHS+GA GA E+I  ++ ++
Sbjct: 306 IDHVNAHATGTSVGDVAEGKAINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALR 365

Query: 351 ERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRRY 404
           +  I  + N+E +DPE   + +V            ++NSFGFGG N  L F RY
Sbjct: 366 DGVIPPTLNLENLDPEID-LDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGRY 418


>gnl|CDD|180594 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 425

 Score =  202 bits (517), Expect = 1e-52
 Identities = 141/435 (32%), Positives = 198/435 (45%), Gaps = 54/435 (12%)

Query: 4   VAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGK------PLLNAA 57
           VAVTGMG+V+S+G   ++   +L    SGI     F   G R ++ G           A+
Sbjct: 13  VAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESPFGAS 72

Query: 58  ELIDRKAMRFLSQGGTWGHLAMQEAITDSRLQ-------------PCEIT-HERTGLIAG 103
            L +  A            LA +EA+  + +              P E+    R  L A 
Sbjct: 73  ALSEALA-----------RLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAA 121

Query: 104 SGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGTSYSISSACA 163
            G        S   L R      R       +    + +  L+  F  RG   S+S+ACA
Sbjct: 122 VGDND---APSYDRLLRA-ARGGRFDALH-ERFQFGSIADRLADRFGTRGLPISLSTACA 176

Query: 164 TSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNL--FDAMGAMSSHFNHDPCSASRPY 221
           + A  I    E I+ G+ D        D   +   L  F  + A+S+  N  P  AS+P+
Sbjct: 177 SGATAIQLGVEAIRRGETDRALCIAT-DGSVSAEALIRFSLLSALSTQ-NDPPEKASKPF 234

Query: 222 DSRRDGFVISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDG--DDMVSPSGEGAIRC 279
              RDGFV++ GA  +VLE +E A ARGAKI   + G G   D       SP G  AI  
Sbjct: 235 SKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGA 294

Query: 280 MRQALSS---VEEPVDYINTHGTATPKGDKKEVEAIREVFK---GNIPYIQSTKSLTGHS 333
           +R AL+      E +DYIN HGT+TP+ DK E   +  VF     +IP + S KS+ GH+
Sbjct: 295 IRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIP-VSSNKSMIGHT 353

Query: 334 LGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGIP--IVRKRIDNAKIDTVLSNSFG 391
           L AAGA EA++ L+ +Q   +  + N +  DP    IP  +V     +A++  VLSNSFG
Sbjct: 354 LTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPA---IPLDVVPNVARDARVTAVLSNSFG 410

Query: 392 FGGTNATLVFRRYKG 406
           FGG NA+LV      
Sbjct: 411 FGGQNASLVLTAEPA 425


>gnl|CDD|181683 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I;
           Reviewed.
          Length = 392

 Score =  201 bits (513), Expect = 4e-52
 Identities = 120/410 (29%), Positives = 178/410 (43%), Gaps = 27/410 (6%)

Query: 1   MRRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGKPLLNAAELI 60
           M  V ++  G  S++G  +  +  +LR  R+      DF        V     +    L 
Sbjct: 1   MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWLVDLPTWVGEVVGVELPALP 60

Query: 61  DRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLTR 120
              A  F  +      LA+Q+              +R G++ G+   ST  I+      R
Sbjct: 61  AALA-AFDCRNNRLALLALQQIEPAVEAAIARYGADRIGVVLGT---STSGILEGELAYR 116

Query: 121 EHCSTRRIGP--FAVPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQS 178
                    P  +   +    + +  L  +  + G +Y+IS+AC++SA    +A  L+++
Sbjct: 117 RRDPAHGALPADYHYAQQELGSLADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEA 176

Query: 179 GKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAAVIV 238
           G  D    GG + L     N F+++ ++S      PC   RP+ + RDG  I   AA  +
Sbjct: 177 GLCDAAIVGGVDSLCRLTLNGFNSLESLSPQ----PC---RPFSANRDGINIGEAAAFFL 229

Query: 239 LEEMERAKARGAKIYAELTGYGSTCDGDDMVSP--SGEGAIRCMRQALSSVE---EPVDY 293
           LE  + A          L G G + D   M +P   G GAI  M+QAL+        + Y
Sbjct: 230 LEREDDAAVA-------LLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGY 282

Query: 294 INTHGTATPKGDKKEVEAIREVFKGNIPYIQSTKSLTGHSLGAAGAQEAIYCLIMMQERF 353
           IN HGTATP  D  E  A+  VF   +P   STK LTGH+LGAAGA EA  C + ++   
Sbjct: 283 INLHGTATPLNDAMESRAVAAVFGDGVP-CSSTKGLTGHTLGAAGAVEAAICWLALRHGL 341

Query: 354 IGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRR 403
                N  + DP    + +V        I  VLSNSF FGG N +L+F R
Sbjct: 342 PPHGWNTGQPDPALPPLYLVENA-QALAIRYVLSNSFAFGGNNCSLIFGR 390


>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II;
           Provisional.
          Length = 342

 Score =  199 bits (508), Expect = 8e-52
 Identities = 120/317 (37%), Positives = 180/317 (56%), Gaps = 8/317 (2%)

Query: 95  HERTGLIAGSGGPSTKCIVSAADLTREHCSTRRIGPFAVPKAMSSTASATLSTWFKIRGT 154
            ERT  I G+G      I  A   T +    +R+ PF VP  + + A+  +S     +G 
Sbjct: 25  QERTATIIGAGIGGFPAIAHAVR-TSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGP 83

Query: 155 SYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNL-FDAMGAMSSHFNHD 213
             +  +ACA     IG+A  +I++ + D+   GG E +  T+S   F A  A+S+HFN  
Sbjct: 84  IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNST 143

Query: 214 PCSASRPYDSRRDGFVISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPS- 272
           P  ASRP+D+ RDGFV+  GA ++++EE+E A ARGAK  AE+ GYG++ D   M S + 
Sbjct: 144 PEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAE 203

Query: 273 -GEGAIRCMRQALSS---VEEPVDYINTHGTATPKGDKKEVEAIREVF-KGNIPYIQSTK 327
            G+GA R M+ AL       E V ++N H T+TP GD  E+ AI+ +F + N   I STK
Sbjct: 204 DGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGESNALAITSTK 263

Query: 328 SLTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLS 387
           S TGH LGAAG  E I+ ++ ++++ +  + N+E  DP  KG+ I+        +   LS
Sbjct: 264 SATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYALS 323

Query: 388 NSFGFGGTNATLVFRRY 404
           N FGF G NA+++ +R+
Sbjct: 324 NGFGFAGVNASILLKRW 340


>gnl|CDD|180324 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 381

 Score =  175 bits (445), Expect = 2e-44
 Identities = 121/419 (28%), Positives = 198/419 (47%), Gaps = 54/419 (12%)

Query: 1   MRRVAVTGMGIVSSIGNNVSEVAISLREARSGITFSEDFAKFGFRCQVWGKPL-LNAAEL 59
           M +V VTG+G+VS++G+ + +    L + +SGI   + F +          PL L   + 
Sbjct: 1   MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPELPPL------PLGLIGNQP 53

Query: 60  IDRKAMRFLSQGGTWGHLAMQEAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAADLT 119
                +  L++        +  A+ D+ L P        G++ GS   S  C      L 
Sbjct: 54  SS---LEDLTK------TVVTAALKDAGLTPPL---TDCGVVIGS---SRGCQGQWEKLA 98

Query: 120 REHCSTRRIGPFAVPK--------AMSSTASATLSTWFKIRGTSYSISSACATSAHCIGN 171
           R+           +            ++ A+A        +G   +  +ACAT    I  
Sbjct: 99  RQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQ---IGTQGPVLAPMAACATGLWAIAQ 155

Query: 172 AAELIQSGKQDIMFAGGQED--LDWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFV 229
             ELIQ+G+   + AG  E      T++  F  MGA++        + + P+D +R+G V
Sbjct: 156 GVELIQTGQCQRVIAGAVEAPITPLTLAG-FQQMGALAK-------TGAYPFDRQREGLV 207

Query: 230 ISGGAAVIVLEEMERAKARGAKIYAELTGYGSTCDGDDMVSPSGEG--AIRCMRQALSSV 287
           +  G A++VLE  E A+ RGAKIY ++ G+G TCD   M +P  +G  AI  ++Q L+  
Sbjct: 208 LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARS 267

Query: 288 E---EPVDYINTHGTATPKGDKKEVEAIREVFKGNIPYIQSTKSLTGHSLGAAGAQEAIY 344
               E +DYI+ HGTAT   D++E   I+ +F   +  + STK  TGH+LGA+GA    +
Sbjct: 268 GLTPEDIDYIHAHGTATRLNDQREANLIQALFPHRVA-VSSTKGATGHTLGASGALGVAF 326

Query: 345 CLIMMQERFIGESKNIEEIDPEFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFRR 403
            L+ ++ + +     ++E  PEF  +  VR+    + +  VL  SFGFGG NA +   +
Sbjct: 327 SLLALRHQQLPPCVGLQE--PEFD-LNFVRQA-QQSPLQNVLCLSFGFGGQNAAIALGK 381


>gnl|CDD|129058 smart00825, PKS_KS, Beta-ketoacyl synthase.  The structure of
           beta-ketoacyl synthase is similar to that of the
           thiolase family and also chalcone synthase. The active
           site of beta-ketoacyl synthase is located between the N
           and C-terminal domains.
          Length = 424

 Score =  130 bits (331), Expect = 4e-31
 Identities = 95/341 (27%), Positives = 148/341 (43%), Gaps = 38/341 (11%)

Query: 81  EAITDSRLQPCEITHERTGLIAGSGGPSTKCIVSAAD-LTREHCSTRRIGPFAVPKAMSS 139
           EA+ D+ + P  +   RTG+  G           ++D           I  +A      S
Sbjct: 97  EALEDAGIDPESLRGSRTGVFVG---------AMSSDYAELLARDPEDIEGYAATGTARS 147

Query: 140 TASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGG-QEDLDWTMSN 198
             +  +S +F +RG S ++ +AC++S   +  A + ++SG+ D+  AGG    L      
Sbjct: 148 FIANRISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFV 207

Query: 199 LFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAAVIVLEEMERAKARGAKIYAELTG 258
            F   G +S           + +D+  DG+V   G  V+VL+ +  A   G  I A + G
Sbjct: 208 GFSRAGMLSPD------GRCKTFDADADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRG 261

Query: 259 YGSTCDGDD--MVSPSGEGAIRCMRQALSSVE-EP--VDYINTHGTATPKGDKKEVEAIR 313
                DG    + +PSG    R +RQAL+    +P  VDY+  HGT TP GD  E EA+ 
Sbjct: 262 SAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALA 321

Query: 314 EVFKGNIP-----YIQSTKSLTGHSLGAAGAQEA--IYCLIMMQERFIGESKNIEE---- 362
            VF    P      + S KS  GH   AAG   A  I  ++ ++   I  + + E     
Sbjct: 322 AVFGQGRPRDGPLLLGSVKSNIGHLEAAAGV--AGLIKVVLALRHGTIPPTLHFETPNPH 379

Query: 363 IDPEFKGIPIVRKRID---NAKIDTVLSNSFGFGGTNATLV 400
           ID E   + +  +        +      +SFGFGGTNA ++
Sbjct: 380 IDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVI 420


>gnl|CDD|163029 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid
           synthase PfaA.  Members of the seed for this alignment
           are involved in omega-3 polyunsaturated fatty acid
           biosynthesis, such as the protein PfaA from the
           eicosapentaenoic acid biosynthesis operon in
           Photobacterium profundum strain SS9. PfaA is encoded
           together with PfaB, PfaC, and PfaD, and the functions of
           the individual polypeptides have not yet been described.
           More distant homologs of PfaA, also included with the
           reach of this model, appear to be involved in
           polyketide-like biosynthetic mechanisms of
           polyunsaturated fatty acid biosynthesis, an alternative
           to the more familiar iterated mechanism of chain
           extension and desaturation, and in most cases are
           encoded near genes for homologs of PfaB, PfaC, and/or
           PfaD.
          Length = 2582

 Score = 82.7 bits (204), Expect = 2e-16
 Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 28/293 (9%)

Query: 134 PKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQ-EDL 192
           P ++ +  S  ++  F + G +  + +ACA S   I  A   +  G+ ++M  GG   D 
Sbjct: 178 PGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDN 237

Query: 193 DWTMSNLFDAMGAMSSHFNHDPCSASRPYDSRRDGFVISGGAAVIVLEEMERAKARGAKI 252
              M   F    A ++  N D     +P+D    G +I  G  ++ L+ +E A+  G +I
Sbjct: 238 SPFMYMSFSKTPAFTT--NED----IQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRI 291

Query: 253 YAELTGYGSTCDG--DDMVSPSGEGAIRCMRQALSSV---EEPVDYINTHGTATPKGDKK 307
           YA + G G++ DG    + +P  EG  + +++A             I  HGT T  GD  
Sbjct: 292 YAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVA 351

Query: 308 EVEAIREVFKGNIPYIQ-----STKSLTGHSLGAAGAQEAIYCLIMMQERFIGESKNIEE 362
           E   +  VF  +    Q     S KS  GH+   AG    I  ++ +  + +  + N+++
Sbjct: 352 EFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQ 411

Query: 363 IDP--EFKGIPIV--------RKRIDNAKIDTVLSNSFGFGGTNATLVFRRYK 405
            +P  + +  P           +R D       +S SFGFGGTN  +V   Y 
Sbjct: 412 PNPKLDIENSPFYLNTETRPWMQREDGTPRRAGIS-SFGFGGTNFHMVLEEYS 463


>gnl|CDD|180600 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II;
           Reviewed.
          Length = 398

 Score = 46.9 bits (112), Expect = 1e-05
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 14/103 (13%)

Query: 161 ACATSAHCIGNAAELIQSGKQDIMFAGG-----QEDLDWTMSNLFDAMGAMSSHFNHDPC 215
           +   SA  I  A   I SG+ D    GG     + D+      L   +G +       P 
Sbjct: 176 SAGVSA--IEIAFARIASGQSDHALVGGAYNAERPDM-----LLLYELGGLLLKGGWAPV 228

Query: 216 SASRPYDSRRDGFVISGGAAVIVLEEMERAKARGAKIYAELTG 258
            +    D    GF++  G A +VLE  E A+ARGA+ YA ++G
Sbjct: 229 WSRGGED--GGGFILGSGGAFLVLESREHAEARGARPYARISG 269


>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
          Length = 428

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 18/35 (51%), Positives = 22/35 (62%)

Query: 156 YSISSACATSAHCIGNAAELIQSGKQDIMFAGGQE 190
           YS+S ACATS   + N AE I +G  DI  AGG +
Sbjct: 85  YSVSRACATSFQAVANVAESIMAGTIDIGIAGGAD 119


>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI.  This
           subunit of the FadJI complex has acetyl-CoA
           C-acyltransferase (EC 2.3.1.16) activity, and is also
           known as beta-ketothiolase and fatty oxidation complex,
           beta subunit, and YfcY. This protein is almost always
           located adjacent to FadJ (TIGR02440). The FadJI complex
           is needed for anaerobic beta-oxidation of short-chain
           fatty acids in E. coli.
          Length = 430

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 133 VPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQE 190
           +P+A +      L T   +   +YS++ ACATS     N AE I +G  DI  AGG +
Sbjct: 64  MPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGAD 121


>gnl|CDD|162610 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases.  This
           model represents a large family of enzymes which
           catalyze the thiolysis of a linear fatty acid CoA (or
           acetoacetyl-CoA) using a second CoA molecule to produce
           acetyl-CoA and a CoA-ester product two carbons shorter
           (or, alternatively, the condensation of two molecules of
           acetyl-CoA to produce acetoacetyl-CoA and CoA). This
           enzyme is also known as "thiolase", "3-ketoacyl-CoA
           thiolase", "beta-ketothiolase" and "Fatty oxidation
           complex beta subunit". When catalyzing the degradative
           reaction on fatty acids the corresponding EC number is
           2.3.1.16. The condensation reaction corresponds to
           2.3.1.9. Note that the enzymes which catalyze the
           condensation are generally not involved in fatty acid
           biosynthesis, which is carried out by a decarboxylating
           condensation of acetyl and malonyl esters of acyl
           carrier proteins. Rather, this activity may produce
           acetoacetyl-CoA for pathways such as IPP biosynthesis in
           the absence of sufficient fatty acid oxidation.
          Length = 386

 Score = 35.3 bits (82), Expect = 0.029
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 4/43 (9%)

Query: 156 YSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSN 198
           Y+++  CA+    +  AA+LI++G+ D++ AGG E    +MS 
Sbjct: 77  YTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVE----SMSR 115



 Score = 27.2 bits (61), Expect = 7.2
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 230 ISGGAAVIVLEEMERAKARGAKIYAELTGYGST-CDGDDM 268
           ++ GAA ++L   ERAK  G    A +  +     D + M
Sbjct: 245 LNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIM 284


>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
          Length = 393

 Score = 35.1 bits (82), Expect = 0.029
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 12/69 (17%)

Query: 224 RRDGFV-------ISGGAAVIVLEEMERAKARGAKIYAELTGYGST-CDGDDMVSPSGEG 275
            +DG V       I+ GAA +V+    +AK  G    A +  Y     D   M    G G
Sbjct: 237 DKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIM----GIG 292

Query: 276 AIRCMRQAL 284
            +  +R+AL
Sbjct: 293 PVPAIRKAL 301



 Score = 31.3 bits (72), Expect = 0.46
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 154 TSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSN 198
            + +I+  C +    +  AA+ I++G  DI+ AGGQE    +MS 
Sbjct: 80  PALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQE----SMSQ 120


>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
          Length = 400

 Score = 34.8 bits (80), Expect = 0.047
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 157 SISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHF 210
           +I+  C +    +G AA  I+SG+  +M AGG E    +MS     MG   S F
Sbjct: 85  TINRLCGSGMDAVGVAARAIKSGEAALMIAGGVE----SMSRAPFVMGKAESAF 134


>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
          Length = 392

 Score = 33.5 bits (76), Expect = 0.091
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 156 YSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGA 205
           Y+I+  C +    +  AA  I +G  +I+ AGGQE++   M   +   GA
Sbjct: 83  YTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGA 132


>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
          Length = 394

 Score = 33.4 bits (77), Expect = 0.12
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 5/56 (8%)

Query: 230 ISGGAAVIVLEEMERAKARGAKIYAELTGYG-STCDGDDMVSPSGEGAIRCMRQAL 284
           I+ GAA +VL E + A+ARG K  A L GY  +  D + M    G G +   ++AL
Sbjct: 251 INDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYM----GIGPVPATQKAL 302


>gnl|CDD|178250 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
          Length = 394

 Score = 31.6 bits (72), Expect = 0.38
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 7/58 (12%)

Query: 210 FNHDPCSASRPYDSRRDGFV-------ISGGAAVIVLEEMERAKARGAKIYAELTGYG 260
           F+       RP      G V       IS GAA +VL   E+A   G ++ A++ GY 
Sbjct: 223 FDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYA 280



 Score = 27.4 bits (61), Expect = 6.5
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 157 SISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSN 198
           +++  CA+    +  AA+ IQ G  D++ AGG E    +MSN
Sbjct: 82  TVNKVCASGMKAVMLAAQSIQLGINDVVVAGGME----SMSN 119


>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
          Length = 388

 Score = 31.5 bits (71), Expect = 0.45
 Identities = 13/39 (33%), Positives = 25/39 (64%)

Query: 154 TSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDL 192
           T Y+++  CA+    + +AA  I  G++D++ AGG E++
Sbjct: 80  TKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENM 118


>gnl|CDD|179974 PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.
          Length = 384

 Score = 31.2 bits (72), Expect = 0.46
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 287 VEEPVD-YINTHGTATPKGDKKEVEAIREVF 316
           V EPV  Y++T GT     D+K  EA+REVF
Sbjct: 304 VAEPVSIYVDTFGTGK-VSDEKIEEAVREVF 333


>gnl|CDD|131483 TIGR02430, pcaF, beta-ketoadipyl CoA thiolase.  Members of this
           family are designated beta-ketoadipyl CoA thiolase, an
           enzyme that acts at the end of pathways for the
           degradation of protocatechuate (from benzoate and
           related compounds) and of phenylacetic acid.
          Length = 400

 Score = 30.9 bits (70), Expect = 0.56
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 162 CATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHF 210
           C +    IG AA  I++G+ D++ AGG E    +MS     MG   S F
Sbjct: 89  CGSGLDAIGMAARAIKAGEADLLIAGGVE----SMSRAPFVMGKADSAF 133


>gnl|CDD|184033 PRK13404, PRK13404, dihydropyrimidinase; Provisional.
          Length = 477

 Score = 30.8 bits (70), Expect = 0.63
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 16/57 (28%)

Query: 230 ISGGAAVIVLEEMERAKARGAKIYAELTGYGSTC------DGDDMVSPSGEGAIRCM 280
           +SG  A    E++ RA+ RG KI+AE      TC        +D+  P  EGA + +
Sbjct: 242 VSGREAA---EQIRRARGRGLKIFAE------TCPQYLFLTAEDLDRPGMEGA-KYI 288


>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
          Length = 401

 Score = 29.5 bits (67), Expect = 1.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 162 CATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHF 210
           C +    +G AA  I++G+ ++M AGG E    +MS     MG   S F
Sbjct: 90  CGSGMDAVGTAARAIKAGEAELMIAGGVE----SMSRAPFVMGKADSAF 134


>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
          Length = 393

 Score = 29.3 bits (66), Expect = 2.1
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 155 SYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSN 198
           + +++  CA+    +  A ++I++G   ++ AGG E    +MSN
Sbjct: 81  TETVNKVCASGLRAVTLADQIIRAGDASVIVAGGME----SMSN 120


>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
          Length = 394

 Score = 29.3 bits (66), Expect = 2.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 157 SISSACATSAHCIGNAAELIQSGKQDIMFAGGQE 190
           ++   CA+S   +   A  I +G  DI+ AGG E
Sbjct: 90  AVDRQCASSLTTVSIGAMEIATGMADIVIAGGVE 123


>gnl|CDD|181315 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
          Length = 402

 Score = 28.7 bits (65), Expect = 2.6
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 156 YSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFNHDPC 215
             I+  CA+    +  AA  ++SG  D++ AGG E    +MS +   MG+    +  DP 
Sbjct: 85  VQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVE----SMSRV--PMGSDGGAWAMDPS 138

Query: 216 SASRPY 221
           +    Y
Sbjct: 139 TNFPTY 144


>gnl|CDD|182884 PRK10987, PRK10987, regulatory protein AmpE; Provisional.
          Length = 284

 Score = 28.7 bits (65), Expect = 2.7
 Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 5/38 (13%)

Query: 174 ELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHFN 211
              QSG   ++       LDW    L     A+  HF 
Sbjct: 183 PRAQSGIDALLHV-----LDWLPVRLAGFGYALLGHFE 215


>gnl|CDD|178399 PLN02802, PLN02802, triacylglycerol lipase.
          Length = 509

 Score = 28.6 bits (64), Expect = 2.7
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%)

Query: 308 EVEAIREVFKGNIPYIQSTKSLTGHSLGAAGA 339
           EV  + E +KG    I    ++TGHSLGAA A
Sbjct: 317 EVRRLMEKYKGEELSI----TVTGHSLGAALA 344


>gnl|CDD|180309 PRK05899, PRK05899, transketolase; Reviewed.
          Length = 624

 Score = 28.6 bits (65), Expect = 2.8
 Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 10/39 (25%)

Query: 202 AMGAM-------SSHFNHDPCSASRPYDSRRDGFVISGG 233
            MGA        +    HDP     P    RD FV+S G
Sbjct: 34  PMGAADIAYVLWTRFLRHDP---KNPKWPNRDRFVLSAG 69


>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
          Length = 390

 Score = 28.5 bits (64), Expect = 3.3
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 157 SISSACATSAHCIGNAAELIQSGKQDIMFAGGQE 190
           SI   C +S   +  AA+ + SG  DI+ A G E
Sbjct: 84  SIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVE 117


>gnl|CDD|184454 PRK14016, PRK14016, cyanophycin synthetase; Provisional.
          Length = 727

 Score = 28.2 bits (64), Expect = 3.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 106 GPSTKCIVSAAD 117
           GPST  IV AA+
Sbjct: 159 GPSTAAIVDAAE 170


>gnl|CDD|181388 PRK08323, PRK08323, phenylhydantoinase; Validated.
          Length = 459

 Score = 28.2 bits (64), Expect = 3.7
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 16/58 (27%)

Query: 230 ISGGAAVIVLEEMERAKARGAKIYAELTGYGSTC------DGDDMVSPSG-EGAIRCM 280
           +S   A+   E + RA+ARG +++ E      TC      D  +   P   EGA   M
Sbjct: 236 VSCKEAL---EAIRRARARGQRVFGE------TCPQYLLLDESEYDGPDWFEGAKYVM 284


>gnl|CDD|183295 PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional.
          Length = 697

 Score = 27.9 bits (63), Expect = 4.8
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 3/24 (12%)

Query: 130 PFAVPKAMSSTASATLSTWFKIRG 153
           PFAVP    S   ATL+ W K RG
Sbjct: 615 PFAVP---DSPVEATLAEWLKSRG 635


>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
          Length = 382

 Score = 27.7 bits (62), Expect = 4.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 162 CATSAHCIGNAAELIQSGKQDIMFAGGQEDLDW 194
           C +S   I  AA+ + SG QD++ AGG +++  
Sbjct: 89  CGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQ 121


>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
          Length = 399

 Score = 27.7 bits (62), Expect = 5.1
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 9/56 (16%)

Query: 162 CATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMG---AMSSH-FNHD 213
           CA+    +  AA+ I+ G+ D+M A G E    +MS +   MG   +MS   F  D
Sbjct: 95  CASGLQAVAMAADRIRVGEADVMIAAGVE----SMS-MVPMMGNKPSMSPAIFARD 145


>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
          Length = 393

 Score = 27.9 bits (62), Expect = 5.2
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 224 RRDGFVISG-------GAAVIVLEEMERAKARGAKIYAELTGYGS 261
           ++DG V +G       GAA ++L    +AKA G  + A++  Y +
Sbjct: 237 KKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYAN 281


>gnl|CDD|180468 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
          Length = 404

 Score = 27.6 bits (62), Expect = 6.2
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)

Query: 162 CATSAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSN 198
           C +    +  AA  +Q+G  D++ AGG E    +MSN
Sbjct: 88  CGSGLQAVITAAMQVQTGAADVVIAGGAE----SMSN 120


>gnl|CDD|184047 PRK13426, PRK13426, F0F1 ATP synthase subunit gamma; Provisional.
          Length = 291

 Score = 27.4 bits (61), Expect = 7.3
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 311 AIREVFKGNIPYIQSTKSLTGHSLGAAG-----AQEAIYCLIMMQERFIGESKNIEEIDP 365
           +++E+ K  I  +QST+ +T      A      AQ AI  ++  Q +      N    D 
Sbjct: 3   SLKEI-KTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADL 61

Query: 366 EFKGIPIVRKRIDNAKIDTVLSNSFGFGGTNATLV 400
           + +    V + +    I    SN+   GG NA ++
Sbjct: 62  DVESPFTVERPVKRVAIVVFSSNTSLCGGFNANII 96


>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
          Length = 426

 Score = 27.3 bits (61), Expect = 8.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 162 CATSAHCIGNAAELIQSGKQDIMFAGGQEDL 192
           CA+    + +AA  I  G+ D++ AGG E +
Sbjct: 89  CASGMQALDSAAANIALGRADLVLAGGVEAM 119


>gnl|CDD|178604 PLN03037, PLN03037, lipase class 3 family protein; Provisional.
          Length = 525

 Score = 27.2 bits (60), Expect = 8.4
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 307 KEVEAIREVFKGNIPYIQSTKSLTGHSLGAAGA 339
           +EV+ +   FK     +  T  +TGHSLG A A
Sbjct: 302 EEVKRLVNFFKDRGEEVSLT--ITGHSLGGALA 332


>gnl|CDD|182288 PRK10178, PRK10178, D-alanyl-D-alanine dipeptidase; Provisional.
          Length = 184

 Score = 26.9 bits (60), Expect = 8.8
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 165 SAHCIGNAAELIQSGKQDIMFAGGQEDLDWTMSNLFDAMGAMSSHF 210
           S H  G A +L       ++ A G   LD  M   FD M A S HF
Sbjct: 96  SNHSRGTAIDL------TLVDAHGNI-LD--MGTGFDEMHARSHHF 132


>gnl|CDD|173423 PTZ00133, PTZ00133, ADP-ribosylation factor; Provisional.
          Length = 182

 Score = 27.1 bits (60), Expect = 9.3
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 19/71 (26%)

Query: 133 VPKAMSSTASATLSTWFKIRGTSYSISSACATSAHCIGNAAELIQSGKQDIMFAGGQEDL 192
           +P AMS+T          +R  ++ I   CAT+A                    G  E L
Sbjct: 130 LPNAMSTTEVTEKLGLHSVRQRNWYIQGCCATTAQ-------------------GLYEGL 170

Query: 193 DWTMSNLFDAM 203
           DW  +N+  +M
Sbjct: 171 DWLSANIKKSM 181


>gnl|CDD|177579 PHA03294, PHA03294, envelope glycoprotein H; Provisional.
          Length = 835

 Score = 27.0 bits (60), Expect = 10.0
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 269 VSPSGEGAIRCMRQALSSVEEPVDY 293
            + S     + MR+  +  EE +DY
Sbjct: 314 NNASDGSMYKAMREVAAYPEESLDY 338


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.318    0.132    0.389 

Gapped
Lambda     K      H
   0.267   0.0841    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 6,567,135
Number of extensions: 419760
Number of successful extensions: 1041
Number of sequences better than 10.0: 1
Number of HSP's gapped: 940
Number of HSP's successfully gapped: 70
Length of query: 406
Length of database: 5,994,473
Length adjustment: 96
Effective length of query: 310
Effective length of database: 3,920,105
Effective search space: 1215232550
Effective search space used: 1215232550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (25.9 bits)