HHsearch alignment for GI: 254780462 and conserved domain: COG1086

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=99.65  E-value=6.6e-14  Score=104.51  Aligned_cols=226  Identities=16%  Similarity=0.160  Sum_probs=166.4

Q ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEECCHHHHHHHH-HHHHCCC--CEEEEECCCCCHHHHHHHHH
Q ss_conf             8756887899938898852589999999989988-999948978999999-9985159--64999877999999999999
Q gi|254780462|r    2 INILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQ-LAFSYQGESIGKRLK-PLALTVD--SDFMIPCNVEDPSSMDLLFE   77 (267)
Q Consensus         2 m~~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~-V~i~~~~~~~~~~~~-~l~~~~~--~~~~~~~Dv~~~~~v~~~~~   77 (267)
T Consensus       245 ~~~~~gK~vLVTGagGS--iGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~  322 (588)
T COG1086         245 GAMLTGKTVLVTGGGGS--IGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAME  322 (588)
T ss_pred             HHHCCCCEEEEECCCCC--HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf             86707988999689873--6799999998549878999617637799999999862787516899635346899999986


Q ss_pred             HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCC
Q ss_conf             99998379889993683317765557612579999977650166112322210022244684168988752014564321
Q gi|254780462|r   78 RIKERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYGGSMRVVPNYN  157 (267)
Q Consensus        78 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~~~~~~~~~~~  157 (267)
T Consensus       323 ~~-----kvd~VfHAAA~KH-----VPl~E~nP---~Eai~tNV~GT~nv~~aa~~~~V~--~~V~iSTDKAV~Pt---N  384 (588)
T COG1086         323 GH-----KVDIVFHAAALKH-----VPLVEYNP---EEAIKTNVLGTENVAEAAIKNGVK--KFVLISTDKAVNPT---N  384 (588)
T ss_pred             CC-----CCCEEEEHHHHCC-----CCCHHCCH---HHHHHHHHHHHHHHHHHHHHHCCC--EEEEEECCCCCCCC---H
T ss_conf             38-----8866887555536-----86310188---999987217389999999983977--89997058666884---1


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCC--------CCCCCHHHHHHHH
Q ss_conf             00000156776314779984210858975622872685575079847999999826889--------9876699999999
Q gi|254780462|r  158 AMAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPL--------KRTVSLEDIGNSA  229 (267)
Q Consensus       158 ~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl--------~r~~~~edva~~v  229 (267)
T Consensus       385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSVi---PlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LV  461 (588)
T COG1086         385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVI---PLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLV  461 (588)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEECCCCCCH---HHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHH
T ss_conf             7668899999999997410488885799998254545887777---8899999759984546867056788899999999


Q ss_pred             HHHHCHHHCCCCCCEEEECCCCCE
Q ss_conf             986198878878868998688443
Q gi|254780462|r  230 LYLLSYLSNGVTGEIHYVDCGYNI  253 (267)
Q Consensus       230 ~fL~Sd~s~~iTGq~l~VDGG~s~  253 (267)
T Consensus       462 lqA~---a~~~gGeifvldMGepv  482 (588)
T COG1086         462 LQAG---AIAKGGEIFVLDMGEPV  482 (588)
T ss_pred             HHHH---HHCCCCCEEEECCCCCE
T ss_conf             9987---50689858998189972