HHsearch alignment for GI: 254780462 and conserved domain: COG1090
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].
Probab=98.08 E-value=3.7e-05 Score=51.23 Aligned_cols=200 Identities=12% Similarity=0.058 Sum_probs=101.8
Q ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99938898852589999999989988999948978999999998515964999877999999999999999983798899
Q gi|254780462|r 10 GLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERWETLDFV 89 (267)
Q Consensus 10 ~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 89 (267)
T Consensus 1 IliTGgTGl--IG~~L~~~L~~~gh~v~iltR~~~~~~~~-----~-~------~~v~~~~~~~~~~~~------~~Dav 60 (297)
T COG1090 1 ILITGGTGL--IGRALTARLRKGGHQVTILTRRPPKASQN-----L-H------PNVTLWEGLADALTL------GIDAV 60 (297)
T ss_pred CEEECCCCC--HHHHHHHHHHHCCCEEEEEECCCCCHHHH-----C-C------CCCCCCCHHHHCCCC------CCCEE
T ss_conf 957356650--16899999984898699997478502332-----4-7------653343012440367------87789
Q ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 93683317765557612579999977650166112322210022244684168988752014564321000001567763
Q gi|254780462|r 90 VHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYGGSMRVVPNYNAMAPAKSALESS 169 (267)
Q Consensus 90 VnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l 169 (267)
T Consensus 61 INLAG~~I~~r------rWt~~~K~~i~~SRi~~T~~L~-e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~F 133 (297)
T COG1090 61 INLAGEPIAER------RWTEKQKEEIRQSRINTTEKLV-ELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDF 133 (297)
T ss_pred EECCCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCEEEECCEEEEECCCCCEEEECCCCCCCCH
T ss_conf 98889815446------5788999999997768999999-9998526798089852457775588864641578887775
Q ss_pred HHHHHHHH-------HHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHH------HCCCCCCCCCHHHHHHHHHHHHCHH
Q ss_conf 14779984-------2108589756228726855750798479999998------2688998766999999999861988
Q gi|254780462|r 170 TKYLACDY-------GGMNIRINAISAGPVRTLAGASISNGRDIAAWSK------ENSPLKRTVSLEDIGNSALYLLSYL 236 (267)
Q Consensus 170 tr~lA~El-------~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~------~~~Pl~r~~~~edva~~v~fL~Sd~ 236 (267)
T Consensus 134 la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~S-WIhieD~v~~I~fll~~~ 212 (297)
T COG1090 134 LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFS-WIHIEDLVNAILFLLENE 212 (297)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCEEE-EEEHHHHHHHHHHHHHCC
T ss_conf 9999999999986664068469999887786178860343101355225771589873034-332999999999998475
Q ss_pred H
Q ss_conf 7
Q gi|254780462|r 237 S 237 (267)
Q Consensus 237 s 237 (267)
T Consensus 213 ~ 213 (297)
T COG1090 213 Q 213 (297)
T ss_pred C
T ss_conf 7