HHsearch alignment for GI: 254780462 and conserved domain: COG1090

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].
Probab=98.08  E-value=3.7e-05  Score=51.23  Aligned_cols=200  Identities=12%  Similarity=0.058  Sum_probs=101.8

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             99938898852589999999989988999948978999999998515964999877999999999999999983798899
Q gi|254780462|r   10 GLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERWETLDFV   89 (267)
Q Consensus        10 ~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   89 (267)
T Consensus         1 IliTGgTGl--IG~~L~~~L~~~gh~v~iltR~~~~~~~~-----~-~------~~v~~~~~~~~~~~~------~~Dav   60 (297)
T COG1090           1 ILITGGTGL--IGRALTARLRKGGHQVTILTRRPPKASQN-----L-H------PNVTLWEGLADALTL------GIDAV   60 (297)
T ss_pred             CEEECCCCC--HHHHHHHHHHHCCCEEEEEECCCCCHHHH-----C-C------CCCCCCCHHHHCCCC------CCCEE
T ss_conf             957356650--16899999984898699997478502332-----4-7------653343012440367------87789


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf             93683317765557612579999977650166112322210022244684168988752014564321000001567763
Q gi|254780462|r   90 VHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYGGSMRVVPNYNAMAPAKSALESS  169 (267)
Q Consensus        90 VnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l  169 (267)
T Consensus        61 INLAG~~I~~r------rWt~~~K~~i~~SRi~~T~~L~-e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~F  133 (297)
T COG1090          61 INLAGEPIAER------RWTEKQKEEIRQSRINTTEKLV-ELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDF  133 (297)
T ss_pred             EECCCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCEEEECCEEEEECCCCCEEEECCCCCCCCH
T ss_conf             98889815446------5788999999997768999999-9998526798089852457775588864641578887775


Q ss_pred             HHHHHHHH-------HHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHH------HCCCCCCCCCHHHHHHHHHHHHCHH
Q ss_conf             14779984-------2108589756228726855750798479999998------2688998766999999999861988
Q gi|254780462|r  170 TKYLACDY-------GGMNIRINAISAGPVRTLAGASISNGRDIAAWSK------ENSPLKRTVSLEDIGNSALYLLSYL  236 (267)
Q Consensus       170 tr~lA~El-------~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~------~~~Pl~r~~~~edva~~v~fL~Sd~  236 (267)
T Consensus       134 la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~S-WIhieD~v~~I~fll~~~  212 (297)
T COG1090         134 LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFS-WIHIEDLVNAILFLLENE  212 (297)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCEEE-EEEHHHHHHHHHHHHHCC
T ss_conf             9999999999986664068469999887786178860343101355225771589873034-332999999999998475


Q ss_pred             H
Q ss_conf             7
Q gi|254780462|r  237 S  237 (267)
Q Consensus       237 s  237 (267)
T Consensus       213 ~  213 (297)
T COG1090         213 Q  213 (297)
T ss_pred             C
T ss_conf             7