HHsearch alignment for GI: 254780462 and conserved domain: KOG1200

>KOG1200 consensus.
Probab=100.00  E-value=0  Score=382.39  Aligned_cols=243  Identities=18%  Similarity=0.190  Sum_probs=219.5

Q ss_pred             CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             75688789993889885258999999998998899994897899999999851596499987799999999999999998
Q gi|254780462|r    3 NILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKER   82 (267)
Q Consensus         3 ~~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (267)
T Consensus        10 ~r~~sk~~~vtGg~--sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200          10 QRLMSKVAAVTGGS--SGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHHHCCEEEEECCC--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             98746224873487--5077999999974696799750322447999862688776523530467578899999999984


Q ss_pred             HCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCC--C--CCCEEEEEEEEEECCCCCCCCC
Q ss_conf             37988999368331776555761257999997765016611232221002224--4--6841689887520145643210
Q gi|254780462|r   83 WETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLM--P--HGGAMITLTYGGSMRVVPNYNA  158 (267)
Q Consensus        83 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~--~--~~G~II~isS~~~~~~~~~~~~  158 (267)
T Consensus        88 ~g~psvlVncAGItrD----~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtn  163 (256)
T KOG1200          88 LGTPSVLVNCAGITRD----GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTN  163 (256)
T ss_pred             CCCCCEEEECCCCCCC----CCEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCHH
T ss_conf             2997289975764653----020132488888899751213678889999999971679843886445210245655223


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHC
Q ss_conf             00001567763147799842108589756228726855750798479999998268899876699999999986198878
Q gi|254780462|r  159 MAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLSN  238 (267)
Q Consensus       159 Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~Sd~s~  238 (267)
T Consensus       164 YAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp--~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ss  241 (256)
T KOG1200         164 YAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMP--PKVLDKILGMIPMGRLGEAEEVANLVLFLASDASS  241 (256)
T ss_pred             HHHHCCCEEEEEHHHHHHHHHCCCEEEEECCCCCCCHHHHHCC--HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             4453275553009889988654824767614311681254438--78999997558764458889987899988154423


Q ss_pred             CCCCCEEEECCCCCE
Q ss_conf             878868998688443
Q gi|254780462|r  239 GVTGEIHYVDCGYNI  253 (267)
Q Consensus       239 ~iTGq~l~VDGG~s~  253 (267)
T Consensus       242 YiTG~t~evtGGl~m  256 (256)
T KOG1200         242 YITGTTLEVTGGLAM  256 (256)
T ss_pred             CCCCEEEEEECCCCC
T ss_conf             321516998346349