HHsearch alignment for GI: 254780462 and conserved domain: KOG1208
>KOG1208 consensus.
Probab=99.97 E-value=2.9e-29 Score=198.04 Aligned_cols=237 Identities=16% Similarity=0.174 Sum_probs=183.6
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHCC--CCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 5688789993889885258999999998998899994897899-9999998515--964999877999999999999999
Q gi|254780462|r 4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIG-KRLKPLALTV--DSDFMIPCNVEDPSSMDLLFERIK 80 (267)
Q Consensus 4 ~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~-~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (267)
T Consensus 32 ~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208 32 DLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred CCCCCEEEEECCCC--CHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 67787799958988--4379999999957998999847778899999999710877636999879999999999999998
Q ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCC--CEEEEEEEEEECC-------
Q ss_conf 9837988999368331776555761257999997765016611232221002224468--4168988752014-------
Q gi|254780462|r 81 ERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHG--GAMITLTYGGSMR------- 151 (267)
Q Consensus 81 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~II~isS~~~~~------- 151 (267)
T Consensus 110 ~~~~~ldvLInNAGV~~~~-----~-~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l 183 (314)
T KOG1208 110 KKEGPLDVLINNAGVMAPP-----F-SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDL 183 (314)
T ss_pred HCCCCCCEEEECCCCCCCC-----C-CCCCCCHHHEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHC
T ss_conf 5178765898655223676-----5-456544113000232999999999999985378976799806534676653323
Q ss_pred -C-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCH-HHHCCCCCHHHHHHHHHCCCCCCCCCHHH
Q ss_conf -5-----6432100000156776314779984210858975622872685-57507984799999982688998766999
Q gi|254780462|r 152 -V-----VPNYNAMAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTL-AGASISNGRDIAAWSKENSPLKRTVSLED 224 (267)
Q Consensus 152 -~-----~~~~~~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~-~~~~~~~~~~~~~~~~~~~Pl~r~~~~ed 224 (267)
T Consensus 184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~~---~~~~~l~~~l~~~~~ks~~~ 258 (314)
T KOG1208 184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-VN---LLLRLLAKKLSWPLTKSPEQ 258 (314)
T ss_pred CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCCC-CH---HHHHHHHHHHHHHHCCCHHH
T ss_conf 6233135550678888699899999999988554-9669986786121544003-20---78999999976674258887
Q ss_pred HHHHHHHHHC-HHHCCCCCCEEEECCCCCEE
Q ss_conf 9999998619-88788788689986884433
Q gi|254780462|r 225 IGNSALYLLS-YLSNGVTGEIHYVDCGYNIV 254 (267)
Q Consensus 225 va~~v~fL~S-d~s~~iTGq~l~VDGG~s~~ 254 (267)
T Consensus 259 ga~t~~~~a~~p~~~~~sg~y-~~d~~~~~~ 288 (314)
T KOG1208 259 GAATTCYAALSPELEGVSGKY-FEDCAIAEP 288 (314)
T ss_pred HHHHEECHHCCCCCCCCCCCC-CCCCCCCCC
T ss_conf 853142050276334766540-246543557