HHsearch alignment for GI: 254780462 and conserved domain: PRK05476

Probab=91.17  E-value=0.5  Score=26.02  Aligned_cols=94  Identities=18%  Similarity=0.208  Sum_probs=56.4

Q ss_pred             CCC-CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHH-H---------HHHHHHHCCCCEEEEE--CCCCC
Q ss_conf             875-688789993889885258999999998998899994897899-9---------9999985159649998--77999
Q gi|254780462|r    2 INI-LKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIG-K---------RLKPLALTVDSDFMIP--CNVED   68 (267)
Q Consensus         2 m~~-L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~-~---------~~~~l~~~~~~~~~~~--~Dv~~   68 (267)
T Consensus       202 Tn~llaGK~vVV~GY-G~--~GkG~A~~arg~GA~ViVtEvDPi~ALeA~mDGf~V~~~~~a~~~~DifiT~TG~~~vI~  278 (427)
T PRK05476        202 TNVLIAGKVVVVAGY-GD--VGKGSAQRLRGLGARVIVTEIDPICALQAAMDGFEVMTMEEAAEKADIFVTATGNKDVIT  278 (427)
T ss_pred             HCCEECCCEEEEECC-CC--CCCHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCCCC
T ss_conf             352125737999556-65--560089987418987999804737999988627835658998620899999048957248


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99999999999998379889993683317765557612579999977
Q gi|254780462|r   69 PSSMDLLFERIKERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQ  115 (267)
Q Consensus        69 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~  115 (267)
T Consensus       279 ~~h~~~M---------KdgaIl~N~GHfd--------~EIdv~~L~~  308 (427)
T PRK05476        279 AEHMEAM---------KDGAIVCNIGHFD--------NEIDVAALEE  308 (427)
T ss_pred             HHHHHHH---------CCCEEEECCCCCC--------CEEEHHHHHH
T ss_conf             9999850---------7882997677775--------0432887752