HHsearch alignment for GI: 254780462 and conserved domain: PRK08277

Probab=100.00  E-value=0  Score=469.18  Aligned_cols=252  Identities=21%  Similarity=0.277  Sum_probs=224.2

Q ss_pred             CCCC---CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHCCCCEEEEECCCCCHHHHHHHH
Q ss_conf             9875---6887899938898852589999999989988999948978999-99999851596499987799999999999
Q gi|254780462|r    1 MINI---LKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGK-RLKPLALTVDSDFMIPCNVEDPSSMDLLF   76 (267)
Q Consensus         1 mm~~---L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   76 (267)
T Consensus         1 mm~~lf~L~gKvalVTGas~--GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~~~~~Dvtd~~~v~~~~   78 (278)
T PRK08277          1 MMNNLFSLKGKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVEEIKANGGEAIALKADVLDKESLEQAR   78 (278)
T ss_pred             CCCCCCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
T ss_conf             94006388999899958674--8999999999987998999979889999999999845990999982489999999999


Q ss_pred             HHHHHHHCCCCEEEECCCCCCC-----------CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC--CCCEEEE
Q ss_conf             9999983798899936833177-----------65557612579999977650166112322210022244--6841689
Q gi|254780462|r   77 ERIKERWETLDFVVHSIAFSDK-----------NELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMP--HGGAMIT  143 (267)
Q Consensus        77 ~~~~~~~g~iD~lVnnAg~~~~-----------~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~II~  143 (267)
T Consensus        79 ~~~~~~~G~iDiLVNnAG~~~p~~~~~~~~~~~~~~~~~~~d~~~e~w~~~~~vNl~g~~~~~~~~~~~m~~~~~G~IIn  158 (278)
T PRK08277         79 QQILKDFGRCDILINGAGGNHPGATTDNEFHELPPETKTFFDLDEDGFEFVFDLNLLGTLLPTQVFAKDMIEQKGGNIIN  158 (278)
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             99999849988899889876766632332122454557631199999999999975999999999999998769965999


Q ss_pred             EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCC-----HHHHHHHHHCCCCCC
Q ss_conf             887520145643210000015677631477998421085897562287268557507984-----799999982688998
Q gi|254780462|r  144 LTYGGSMRVVPNYNAMAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNG-----RDIAAWSKENSPLKR  218 (267)
Q Consensus       144 isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~-----~~~~~~~~~~~Pl~r  218 (267)
T Consensus       159 isS~~~~~~~~~~~~Y~asKaav~~lTk~lA~e~a~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R  238 (278)
T PRK08277        159 ISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVEFAKVGIRVNAIAPGFFLTEQNRALLLNEDGSPTERANKILAHTPMGR  238 (278)
T ss_pred             ECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
T ss_conf             81366477889865579999999999999999965359499998528887726677641866787999999984799889


Q ss_pred             CCCHHHHHHHHHHHHCH-HHCCCCCCEEEECCCCCEE
Q ss_conf             76699999999986198-8788788689986884433
Q gi|254780462|r  219 TVSLEDIGNSALYLLSY-LSNGVTGEIHYVDCGYNIV  254 (267)
Q Consensus       219 ~~~~edva~~v~fL~Sd-~s~~iTGq~l~VDGG~s~~  254 (267)
T Consensus       239 ~g~pedia~~v~fLaS~~as~yiTG~~i~VDGG~tA~  275 (278)
T PRK08277        239 FGKPEELLGTLLWLADEDASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             CCCHHHHHHHHHHHHCCCHHCCCCCCEEEECCCHHHH
T ss_conf             8499999999999909805277338728869254520