HHsearch alignment for GI: 254780462 and conserved domain: PRK09880

Probab=97.14  E-value=0.0089  Score=36.68  Aligned_cols=102  Identities=21%  Similarity=0.274  Sum_probs=65.2

Q ss_pred             CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             756887899938898852589999999989988-9999489789999999985159649998779999999999999999
Q gi|254780462|r    3 NILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQ-LAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKE   81 (267)
Q Consensus         3 ~~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~-V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (267)
T Consensus       166 ~~~~g~~VlV~G~G---~iGl~~~~~ak~~Ga~~Vi~~d~~~~rl~~a----~~~Ga~~~i--~~~~-~~~~----~~~~  231 (343)
T PRK09880        166 GDLQGKRVFISGVG---PIGCLIVSAVKTLGAAEIVCADLSPRSLSLA----RQMGADVLV--NPQN-DDMD----HWKA  231 (343)
T ss_pred             CCCCCCEEEEECCC---HHHHHHHHHHHHCCCCEEEEEECCHHHHHHH----HHCCCCEEE--CCCC-CCHH----HHHH
T ss_conf             77569889998477---6799999999986998799997978999999----972997998--7987-4399----9996


Q ss_pred             HHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEE
Q ss_conf             837988999368331776555761257999997765016611232221002224468416898875
Q gi|254780462|r   82 RWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYG  147 (267)
Q Consensus        82 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~  147 (267)
T Consensus       232 ~~g~~Dvvie~~G~~--------------~---------------~~~~al~~~r~gG~iv~vG~~  268 (343)
T PRK09880        232 EKGYFDVSFEVSGHP--------------S---------------SVNTCLEVTRAKGVMVQVGMG  268 (343)
T ss_pred             HCCCCCEEEEECCCH--------------H---------------HHHHHHHHCCCCEEEEEEECC
T ss_conf             369977899921999--------------9---------------999999737798399999727