HHsearch alignment for GI: 254780462 and conserved domain: PRK10083

Probab=94.53  E-value=0.12  Score=29.71  Aligned_cols=165  Identities=11%  Similarity=0.162  Sum_probs=83.2

Q ss_pred             CCCCCCEEEEECCCCCCCHHHHHHHHHHH-CCCE-EEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             75688789993889885258999999998-9988-999948978999999998515964999877999999999999999
Q gi|254780462|r    3 NILKGKRGLIMGVANDHSIAWGIAKVLHS-AGAQ-LAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIK   80 (267)
Q Consensus         3 ~~L~gK~~lItGas~~~GIG~aia~~l~~-~Ga~-V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (267)
T Consensus       157 ~~~~g~~VlV~G~-G--~iGl~~~~~~~~~~ga~~Vi~~d~~~~rl~~----A~~~GAd~vi~--~~-~~~~~~~~~---  223 (339)
T PRK10083        157 GPTEQDVALIYGA-G--PVGLTIVQVLKGVYGVKNVIVADRIDERLAL----AKESGADWVIN--NA-QESLAEALA---  223 (339)
T ss_pred             CCCCCCEEEEECC-C--HHHHHHHHHHHHHCCCCEEEEECCCHHHHHH----HHHCCCCEEEC--CC-CCCHHHHHH---
T ss_conf             8999988999587-6--5999999999985699789993798999999----99719989984--88-766999998---


Q ss_pred             HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCH
Q ss_conf             98379889993683317765557612579999977650166112322210022244684168988752014564321000
Q gi|254780462|r   81 ERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHGGAMITLTYGGSMRVVPNYNAMA  160 (267)
Q Consensus        81 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~G~II~isS~~~~~~~~~~~~Y~  160 (267)
T Consensus       224 ~~G~~~dvvid~~g~~--------------~---------------~~~~a~~~~~~gG~iv~~G~~~~~~~i~------  268 (339)
T PRK10083        224 EKGVKPTLIFDAACHP--------------S---------------ILEEAVTLASPAARIVLMGFSSEPSEIV------  268 (339)
T ss_pred             HCCCCCCEEEECCCCH--------------H---------------HHHHHHHHHHCCEEEEEEECCCCCCCCC------
T ss_conf             5399961999666688--------------9---------------9999999851880999992589987536------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHH-CCCCCCCC----CHHHHHHHHHHHHCH
Q ss_conf             0015677631477998421085897562287268557507984799999982-68899876----699999999986198
Q gi|254780462|r  161 PAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKE-NSPLKRTV----SLEDIGNSALYLLSY  235 (267)
Q Consensus       161 asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~-~~Pl~r~~----~~edva~~v~fL~Sd  235 (267)
T Consensus       269 -------------~~~~~~k~l~i~gs---~~~~------~~~~~~~~li~~g~i~~~~lIt~~f~L~~~~~A~~~~~~~  326 (339)
T PRK10083        269 -------------QQGITGKELTIYSS---RLNA------NKFPVVIDWLAKGLIDPEKLITHTFDFQHVADAIELFEKD  326 (339)
T ss_pred             -------------HHHHHHCEEEEEEC---CCCH------HHHHHHHHHHHCCCCCHHHEEEEEEEHHHHHHHHHHHHCC
T ss_conf             -------------88874267899992---2688------8999999999859999157089998989999999998659


Q ss_pred             HH
Q ss_conf             87
Q gi|254780462|r  236 LS  237 (267)
Q Consensus       236 ~s  237 (267)
T Consensus       327 ~~  328 (339)
T PRK10083        327 QR  328 (339)
T ss_pred             CC
T ss_conf             98