HHsearch alignment for GI: 254780462 and conserved domain: PRK11154

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=94.46  E-value=0.22  Score=28.25  Aligned_cols=173  Identities=14%  Similarity=0.050  Sum_probs=79.3

Q ss_pred             CEEEEECCCCCCCHHHHHHHH-HHHCCCEEEEEECCHHHHHHH-HHHHHCCCCEEEEECCCCCHHHHHHHHHHHH-----
Q ss_conf             789993889885258999999-998998899994897899999-9998515964999877999999999999999-----
Q gi|254780462|r    8 KRGLIMGVANDHSIAWGIAKV-LHSAGAQLAFSYQGESIGKRL-KPLALTVDSDFMIPCNVEDPSSMDLLFERIK-----   80 (267)
Q Consensus         8 K~~lItGas~~~GIG~aia~~-l~~~Ga~V~i~~~~~~~~~~~-~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~-----   80 (267)
T Consensus       310 ~kv~ViGa-G~--MG~gIA~~~a~~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~v--~~g~~~~~~~~~~l~~i~~~~~~  384 (706)
T PRK11154        310 NKVGVLGG-GL--MGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKV--KRRHMTPAERDKQMALISGTTDY  384 (706)
T ss_pred             CEEEEECC-CC--CCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHCEEEECCH
T ss_conf             67999864-73--238999999998698799997999999999998899999998--61899989999986224100441


Q ss_pred             HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH---HHHCCCCH----HHHHHHHCCCCCCCCCEEEEEE--EEEECC
Q ss_conf             98379889993683317765557612579999977---65016611----2322210022244684168988--752014
Q gi|254780462|r   81 ERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQ---TMLVSCFS----FTEIVRRAAQLMPHGGAMITLT--YGGSMR  151 (267)
Q Consensus        81 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~---~~~vn~~~----~~~~~~~~~~~~~~~G~II~is--S~~~~~  151 (267)
T Consensus       385 ~~~~~~DlVIEAv~----E~-----~~~K~~v~~~le~~~~~~aIlAtNTSsl~i~~la~~~~rP~r~iG~HFfnP~~~m  455 (706)
T PRK11154        385 RGFKHADLVIEAVF----ED-----LALKQQMVADVEQNCAEHTIFASNTSSLPIGQIAAAAARPEQVIGLHYFSPVEKM  455 (706)
T ss_pred             HHHCCCCEEEEECC----CC-----HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCC
T ss_conf             23156887999714----52-----8889999999996479885895067677689999864784104554425774426


Q ss_pred             CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
Q ss_conf             564-321000001567763147799842108589756228726855
Q gi|254780462|r  152 VVP-NYNAMAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLA  196 (267)
Q Consensus       152 ~~~-~~~~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~  196 (267)
T Consensus       456 ~LVEVi~g~~Ts~et~~~-~~~~~~~lgK~pv~v~-d~pGFi~NRi  499 (706)
T PRK11154        456 PLVEVIPHAKTSAETIAT-TVALAKKQGKTPIVVK-DGAGFYVNRI  499 (706)
T ss_pred             CEEEEECCCCCCHHHHHH-HHHHHHHCCCEEEEEC-CCCCCHHHHH
T ss_conf             427994378983899999-9999997598789963-2374179999