HHsearch alignment for GI: 254780462 and conserved domain: PRK11154
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=94.46 E-value=0.22 Score=28.25 Aligned_cols=173 Identities=14% Similarity=0.050 Sum_probs=79.3
Q ss_pred CEEEEECCCCCCCHHHHHHHH-HHHCCCEEEEEECCHHHHHHH-HHHHHCCCCEEEEECCCCCHHHHHHHHHHHH-----
Q ss_conf 789993889885258999999-998998899994897899999-9998515964999877999999999999999-----
Q gi|254780462|r 8 KRGLIMGVANDHSIAWGIAKV-LHSAGAQLAFSYQGESIGKRL-KPLALTVDSDFMIPCNVEDPSSMDLLFERIK----- 80 (267)
Q Consensus 8 K~~lItGas~~~GIG~aia~~-l~~~Ga~V~i~~~~~~~~~~~-~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~----- 80 (267)
T Consensus 310 ~kv~ViGa-G~--MG~gIA~~~a~~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~v--~~g~~~~~~~~~~l~~i~~~~~~ 384 (706)
T PRK11154 310 NKVGVLGG-GL--MGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKV--KRRHMTPAERDKQMALISGTTDY 384 (706)
T ss_pred CEEEEECC-CC--CCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHCEEEECCH
T ss_conf 67999864-73--238999999998698799997999999999998899999998--61899989999986224100441
Q ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH---HHHCCCCH----HHHHHHHCCCCCCCCCEEEEEE--EEEECC
Q ss_conf 98379889993683317765557612579999977---65016611----2322210022244684168988--752014
Q gi|254780462|r 81 ERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQ---TMLVSCFS----FTEIVRRAAQLMPHGGAMITLT--YGGSMR 151 (267)
Q Consensus 81 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~---~~~vn~~~----~~~~~~~~~~~~~~~G~II~is--S~~~~~ 151 (267)
T Consensus 385 ~~~~~~DlVIEAv~----E~-----~~~K~~v~~~le~~~~~~aIlAtNTSsl~i~~la~~~~rP~r~iG~HFfnP~~~m 455 (706)
T PRK11154 385 RGFKHADLVIEAVF----ED-----LALKQQMVADVEQNCAEHTIFASNTSSLPIGQIAAAAARPEQVIGLHYFSPVEKM 455 (706)
T ss_pred HHHCCCCEEEEECC----CC-----HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCC
T ss_conf 23156887999714----52-----8889999999996479885895067677689999864784104554425774426
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
Q ss_conf 564-321000001567763147799842108589756228726855
Q gi|254780462|r 152 VVP-NYNAMAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLA 196 (267)
Q Consensus 152 ~~~-~~~~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~ 196 (267)
T Consensus 456 ~LVEVi~g~~Ts~et~~~-~~~~~~~lgK~pv~v~-d~pGFi~NRi 499 (706)
T PRK11154 456 PLVEVIPHAKTSAETIAT-TVALAKKQGKTPIVVK-DGAGFYVNRI 499 (706)
T ss_pred CEEEEECCCCCCHHHHHH-HHHHHHHCCCEEEEEC-CCCCCHHHHH
T ss_conf 427994378983899999-9999997598789963-2374179999