HHsearch alignment for GI: 254780462 and conserved domain: PRK12828

Probab=100.00  E-value=0  Score=435.06  Aligned_cols=235  Identities=21%  Similarity=0.245  Sum_probs=208.6

Q ss_pred             CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf             98756887899938898852589999999989988999948978999-99999851596499987799999999999999
Q gi|254780462|r    1 MINILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGK-RLKPLALTVDSDFMIPCNVEDPSSMDLLFERI   79 (267)
Q Consensus         1 mm~~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (267)
T Consensus         1 M~~~L~gKvalITGas~--GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~--~~~~~~~~Dvt~~~~~~~~v~~~   76 (239)
T PRK12828          1 MEHSLQGKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA--DALRIGGIDLVDPQAARRAVDEV   76 (239)
T ss_pred             CCCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC--CCCEEEEECCCCHHHHHHHHHHH
T ss_conf             99996989899947254--899999999998799899997987789999987517--88569996079999999999999


Q ss_pred             HHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC--CCEEEEEEEEEECCCCCCCC
Q ss_conf             9983798899936833177655576125799999776501661123222100222446--84168988752014564321
Q gi|254780462|r   80 KERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPH--GGAMITLTYGGSMRVVPNYN  157 (267)
Q Consensus        80 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~II~isS~~~~~~~~~~~  157 (267)
T Consensus        77 ~~~~G~iDilVnNAG~~~----~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IInisS~~~~~~~~~~~  152 (239)
T PRK12828         77 NRQFGRLDALVNIAGAFV----WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMG  152 (239)
T ss_pred             HHHCCCCCEEEECCCCCC----CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCH
T ss_conf             998399979998977899----9990449999999999999699999999999999876998699997778677799968


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHH
Q ss_conf             00000156776314779984210858975622872685575079847999999826889987669999999998619887
Q gi|254780462|r  158 AMAPAKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLS  237 (267)
Q Consensus       158 ~Y~asKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~Sd~s  237 (267)
T Consensus       153 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~----------~~~~~r~~~p~diA~~v~fL~Sd~s  222 (239)
T PRK12828        153 AYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP----------DADFSRWVTPEQIAAVIAFLLSDEA  222 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCHHCCCC----------HHHCCCCCCHHHHHHHHHHHHCCHH
T ss_conf             999999999999999999861309089999738788820024185----------6461798999999999999958442


Q ss_pred             CCCCCCEEEECCCCCE
Q ss_conf             8878868998688443
Q gi|254780462|r  238 NGVTGEIHYVDCGYNI  253 (267)
Q Consensus       238 ~~iTGq~l~VDGG~s~  253 (267)
T Consensus       223 ~~iTG~~i~VdGG~~l  238 (239)
T PRK12828        223 QAITGASIPVDGGVAL  238 (239)
T ss_pred             CCCCCCEEEECCCCCC
T ss_conf             2855874897978678