HHsearch alignment for GI: 254780462 and conserved domain: TIGR01777

>TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099 This entry represents proteins of unknown function including the Escherichia coli YfcH protein..
Probab=98.16  E-value=4.6e-05  Score=50.64  Aligned_cols=215  Identities=13%  Similarity=0.095  Sum_probs=115.5

Q ss_pred             EEEECC-CCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH-HHHCCCC
Q ss_conf             999388-98852589999999989988999948978999999998515964999877999999999999999-9837988
Q gi|254780462|r   10 GLIMGV-ANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIK-ERWETLD   87 (267)
Q Consensus        10 ~lItGa-s~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~-~~~g~iD   87 (267)
T Consensus         1 ~litGgnTGf--iG~~L~~~L~~~g~~V~~l~R~~~~~~~~~--~~~~-------~~~~~~~~~g~~~~~~~W~~l~~~D   69 (307)
T TIGR01777         1 ILITGGNTGF--IGRALTQRLTKSGHEVTILTRSPQAESNTK--KVGY-------KNWLAEGKLGIVIAESGWSALEGAD   69 (307)
T ss_pred             CEECCCCCCH--HHHHHHHHHHHCCCEEEEEEECCCCCCCHH--CCCC-------CCCCCCCCCCCCCCHHCCCCCCCCC
T ss_conf             9641533023--789999999847998999961686432000--2554-------4555522124520722056678862


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC--CCCCCEEEEEEEEEECCCCCCCCCCHHHH-H
Q ss_conf             99936833177655576125799999776501661123222100222--44684168988752014564321000001-5
Q gi|254780462|r   88 FVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQL--MPHGGAMITLTYGGSMRVVPNYNAMAPAK-S  164 (267)
Q Consensus        88 ~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~--~~~~G~II~isS~~~~~~~~~~~~Y~asK-a  164 (267)
T Consensus        70 aviNLAG~~i----~~P-~RWt~~~K~~i~~SRi~~T~~L~~~i~~~~r~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~  144 (307)
T TIGR01777        70 AVINLAGEPI----ADP-KRWTEERKQEIRDSRIDTTRALVEAIAAAPRAEQKPKVFISASAVGYYGHSEDRVFTEEDAS  144 (307)
T ss_pred             EEEECCCCCC----CCC-CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCCC
T ss_conf             7985568885----778-88787775756523347899999999846566788716885016663068998215116678


Q ss_pred             H-HHHHHHHHHHHH-------HHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCCC------CCCCHHHHHHHHH
Q ss_conf             6-776314779984-------2108589756228726855750798479999998268899------8766999999999
Q gi|254780462|r  165 A-LESSTKYLACDY-------GGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPLK------RTVSLEDIGNSAL  230 (267)
Q Consensus       165 a-l~~ltr~lA~El-------~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl~------r~~~~edva~~v~  230 (267)
T Consensus       145 ~~~ddFla~lc~~WE~~A~~a~~~g~Rvv~~R~G~VLg~~GGaL~~m~~pf~~glG-GplG~G~Q~~SWIH~~D~v~~I~  223 (307)
T TIGR01777       145 GPGDDFLAELCRDWEEAAQAAEQLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLIL  223 (307)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             88777218999999998510533687389876413470898703454566765157-42368841450535889999999


Q ss_pred             HHHCHHHCCCCCC
Q ss_conf             8619887887886
Q gi|254780462|r  231 YLLSYLSNGVTGE  243 (267)
Q Consensus       231 fL~Sd~s~~iTGq  243 (267)
T Consensus       224 ~~l~~--~~~~Gp  234 (307)
T TIGR01777       224 FALEN--ASVSGP  234 (307)
T ss_pred             HHHHC--CCCCCC
T ss_conf             99855--899632