HHsearch alignment for GI: 254780462 and conserved domain: TIGR01830
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=534.95 Aligned_cols=234 Identities=19% Similarity=0.249 Sum_probs=219.7
Q ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEECC-HH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 999388988525899999999899889999489-78-9999999985159649998779999999999999999837988
Q gi|254780462|r 10 GLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQG-ES-IGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERWETLD 87 (267)
Q Consensus 10 ~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~-~~-~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 87 (267)
T Consensus 1 AlVTGas--RGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~G-iD 77 (238)
T TIGR01830 1 ALVTGAS--RGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELG-ID 77 (238)
T ss_pred CEECCCC--CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-CE
T ss_conf 9671678--61679999999867995999659825788899999985697599996038888999999999999829-90
Q ss_pred EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCC--CCCCEEEEEEEEEECCCCCCCCCCHHHHHH
Q ss_conf 999368331776555761257999997765016611232221002224--468416898875201456432100000156
Q gi|254780462|r 88 FVVHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLM--PHGGAMITLTYGGSMRVVPNYNAMAPAKSA 165 (267)
Q Consensus 88 ~lVnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~--~~~G~II~isS~~~~~~~~~~~~Y~asKaa 165 (267)
T Consensus 78 iLVNNAGITrD----~Ll~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaASKAG 153 (238)
T TIGR01830 78 ILVNNAGITRD----NLLMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQANYAASKAG 153 (238)
T ss_pred EEEECCCCCCC----CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHH
T ss_conf 89978741343----01004885568999986126687888998898875067434861002000068742678888755
Q ss_pred HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCEE
Q ss_conf 77631477998421085897562287268557507984799999982688998766999999999861988788788689
Q gi|254780462|r 166 LESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLLSYLSNGVTGEIH 245 (267)
Q Consensus 166 l~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~Sd~s~~iTGq~l 245 (267)
T Consensus 154 ~IGftKSlAkElasRnItVNaVAPGFI~TdMT~~L--~e~~~~~~l~~IPLgR~G~pEeVA~~v~FLASd~AsYITGqv~ 231 (238)
T TIGR01830 154 VIGFTKSLAKELASRNITVNAVAPGFIETDMTDKL--SEKVKKAMLSQIPLGRFGTPEEVANAVAFLASDEASYITGQVI 231 (238)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHC--CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 89999999986036870588874899897000216--9889999985277232677656999999732512474255166
Q ss_pred EECCCCC
Q ss_conf 9868844
Q gi|254780462|r 246 YVDCGYN 252 (267)
Q Consensus 246 ~VDGG~s 252 (267)
T Consensus 232 ~VdGGm~ 238 (238)
T TIGR01830 232 HVDGGMV 238 (238)
T ss_pred ECCCCCC
T ss_conf 3068789