HHsearch alignment for GI: 254780462 and conserved domain: TIGR03325

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=100.00  E-value=0  Score=420.93  Aligned_cols=248  Identities=16%  Similarity=0.165  Sum_probs=209.5

Q ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             56887899938898852589999999989988999948978999999998515964999877999999999999999983
Q gi|254780462|r    4 ILKGKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERW   83 (267)
Q Consensus         4 ~L~gK~~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (267)
T Consensus         2 ~L~gKvalITGgs~--GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~--~~~g~~~~~~~~Dv~~~~~~~~~v~~~~~~~   77 (262)
T TIGR03325         2 RLKGEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELE--AAHGDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             CCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             98998899906787--8999999999987999999989989999999--8679967999845799999999999999984


Q ss_pred             CCCCEEEECCCCCCCC-CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC-CCEEEEEEEEEECCCCCCCCCCHH
Q ss_conf             7988999368331776-55576125799999776501661123222100222446-841689887520145643210000
Q gi|254780462|r   84 ETLDFVVHSIAFSDKN-ELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPH-GGAMITLTYGGSMRVVPNYNAMAP  161 (267)
Q Consensus        84 g~iD~lVnnAg~~~~~-~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~-~G~II~isS~~~~~~~~~~~~Y~a  161 (267)
T Consensus        78 G~iDiLVnNAG~~~~~~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~Y~a  157 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTA  157 (262)
T ss_pred             CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH
T ss_conf             99888997265168776434586241499999999997499999999999999970981899987103248899668999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHC--------CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             01567763147799842108589756228726855750--------7984799999982688998766999999999861
Q gi|254780462|r  162 AKSALESSTKYLACDYGGMNIRINAISAGPVRTLAGAS--------ISNGRDIAAWSKENSPLKRTVSLEDIGNSALYLL  233 (267)
Q Consensus       162 sKaal~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~--------~~~~~~~~~~~~~~~Pl~r~~~~edva~~v~fL~  233 (267)
T Consensus       158 sKaal~~ltr~lA~e~~~~-IRVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeia~av~fL~  236 (262)
T TIGR03325       158 AKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFA  236 (262)
T ss_pred             HHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
T ss_conf             9999999999999997599-789999537888798675443135554211058999970799899839999999999981


Q ss_pred             CH-HHCCCCCCEEEECCCCCEEEC
Q ss_conf             98-878878868998688443343
Q gi|254780462|r  234 SY-LSNGVTGEIHYVDCGYNIVAM  256 (267)
Q Consensus       234 Sd-~s~~iTGq~l~VDGG~s~~~~  256 (267)
T Consensus       237 s~~~s~~iTG~~l~VDGG~~~~~~  260 (262)
T TIGR03325       237 TRGDTVPATGAVLNYDGGMGVRGF  260 (262)
T ss_pred             CCCHHCCEECCEEEECCCCCCCEE
T ss_conf             980226945868897947106730