HHsearch alignment for GI: 254780462 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=98.90 E-value=9.3e-08 Score=67.03 Aligned_cols=199 Identities=16% Similarity=0.095 Sum_probs=113.8
Q ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99938898852589999999989988999948978999999998515964999877999999999999999983798899
Q gi|254780462|r 10 GLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERWETLDFV 89 (267)
Q Consensus 10 ~lItGas~~~GIG~aia~~l~~~Ga~V~i~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 89 (267)
T Consensus 1 IlV~GatG~--iG~~vv~~L~~~g~~Vr~l~R~~~~~-~~~~l~~~g--ve~v~gD~~d~~sl~~al~-------gvd~v 68 (232)
T pfam05368 1 ILVFGATGY--QGGSVVRASLKAGHPVRALVRDPKSE-LAKSLKAAG--VELVEGDLDDHESLVEALK-------GVDVV 68 (232)
T ss_pred EEEECCCHH--HHHHHHHHHHHCCCCEEEEECCCCHH-HHHHHHHCC--CEEEEECCCCHHHHHHHHC-------CCCEE
T ss_conf 099896828--99999999985899389997187366-566664179--8899906888789999967-------99889
Q ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCC-CEEEEEEEEEEC----CCCCCCCCCHHHHH
Q ss_conf 9368331776555761257999997765016611232221002224468-416898875201----45643210000015
Q gi|254780462|r 90 VHSIAFSDKNELRGPYYNTSRDNFIQTMLVSCFSFTEIVRRAAQLMPHG-GAMITLTYGGSM----RVVPNYNAMAPAKS 164 (267)
Q Consensus 90 VnnAg~~~~~~~~~~~~~~~~e~~~~~~~vn~~~~~~~~~~~~~~~~~~-G~II~isS~~~~----~~~~~~~~Y~asKa 164 (267)
T Consensus 69 ~~~~~~~~---------~~~~~~-----------~~~~~~AA~~---aGVk~~V~-ss~~~~~~~~~~~~~~~~~~~~K~ 124 (232)
T pfam05368 69 FSVTGFWL---------SKEIED-----------GKKLADAAKE---AGVKHFIP-SEFGNDVDRSNGVEPAVPHFDSKA 124 (232)
T ss_pred EEECCCCC---------CHHHHH-----------HHHHHHHHHH---CCCCCEEE-EEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99158874---------177999-----------9999999997---39983455-550125545676665527889899
Q ss_pred HHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCHHHHHH---HHHCCCCC--C--CCCHHHHHHHHHHHHCHHH
Q ss_conf 677631477998421085897562287268557507984799999---98268899--8--7669999999998619887
Q gi|254780462|r 165 ALESSTKYLACDYGGMNIRINAISAGPVRTLAGASISNGRDIAAW---SKENSPLK--R--TVSLEDIGNSALYLLSYLS 237 (267)
Q Consensus 165 al~~ltr~lA~El~~~gIrVNaIaPG~i~T~~~~~~~~~~~~~~~---~~~~~Pl~--r--~~~~edva~~v~fL~Sd~s 237 (267)
T Consensus 125 ~~e~~l~~-------~g~~~tilrp~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~l~~p~ 197 (232)
T pfam05368 125 EVERYIRA-------LGIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDKVTLLGPGNPKAVPLDDEEDIGTYVIKILDDPR 197 (232)
T ss_pred HHHHHHHH-------HCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCHH
T ss_conf 99999998-------19985999684254301656544320257653699944898761126528899999999964912
Q ss_pred CCCCCCEEEECCCCCE
Q ss_conf 8878868998688443
Q gi|254780462|r 238 NGVTGEIHYVDCGYNI 253 (267)
Q Consensus 238 ~~iTGq~l~VDGG~s~ 253 (267)
T Consensus 198 ~~-~~~~~~~~-~~~l 211 (232)
T pfam05368 198 KL-KGKYIRPP-GNIL 211 (232)
T ss_pred HC-CCEEEEEC-CCCC
T ss_conf 11-99999828-9867