RPSBLAST alignment for GI: 254780462 and conserved domain: TIGR01963
>gnl|CDD|162628 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255
Score = 50.1 bits (120), Expect = 6e-07
Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 27/262 (10%)
Query: 7 GKRGLIMGVANDHSIAWGIAKVLHSAGAQLAFSYQGESIGKRLKPLALTVDSDFM-IPCN 65
GK L+ G A+ I IA L +AGA + + GE+ + +A + + +
Sbjct: 1 GKTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVAD 58
Query: 66 VEDPSSMDLLFERIKERWETLDFVVHSIAFSDKNELRGPYYNTSRDNFIQT-MLVSCFSF 124
V + + + LD +V++ + + + I ML S F
Sbjct: 59 VTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEE--FPPEDWDRIIAIMLTSAFHT 116
Query: 125 TEIVRRAAQLMPH-----GGAMITLTYGGSMRVVPNYNAMAPAKSALESSTKYLACDYGG 179
RAA +PH G +I + + P +A AK L TK LA +
Sbjct: 117 I----RAA--LPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAA 170
Query: 180 MNIRINAISAGPVRT-LAGASISNGRDIAAWSKEN---------SPLKRTVSLEDIGNSA 229
I +NAI G VRT L I++ +E P KR V+++++ +A
Sbjct: 171 HGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETA 230
Query: 230 LYLLSYLSNGVTGEIHYVDCGY 251
L+L S + G+TG+ +D G+
Sbjct: 231 LFLASDAAAGITGQAIVLDGGW 252