>1pp9_A Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron sulfur protein, cytochrome B; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* 3bcc_A* ...

Probab=100.00 E-value=0 Score=561.44 Aligned_cols=417 Identities=21% Similarity=0.377 Sum_probs=388.1 Q ss_pred CEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECC Q ss_conf 61899879871999985899879999998331144888898348999989733568889889999999708767997532 Q gi|254780464|r 2 NLRISKTSSGITVITEVMPIDSAFVKVNIRAGSRNERQEEHGMAHFLEHMLFKGTTKRTAKEIVEEIEKVGGDINAYTSL 81 (424) Q Consensus 2 ~~~~~~L~NGl~v~~~~~~~~~~~i~~~~~~Gs~~e~~~~~G~ah~lehl~~~gt~~~~~~~~~~~l~~~G~~~na~t~~ 81 (424) ++|+++|+||+||++++.+.|.++++++|++||++|++++.|+||++|||+|+||++++..+|.+.++.+|+.+||+|++ T Consensus 13 ~~~~~~L~NGl~v~~~~~~~~~v~i~~~~~~Gs~~E~~~~~Glahllehm~f~Gt~~~~~~~~~~~l~~~G~~~na~t~~ 92 (446) T 1pp9_A 13 ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTR 92 (446) T ss_dssp CCEEEECTTCCEEEEEECSCSEEEEEEEESCSGGGCCTTTTTHHHHHHHHTTSCBSSSTTTHHHHHHHHTTCEEEEEECS T ss_pred CCEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECC T ss_conf 75799999998899976999979999998004556699974399999999728989999899999999719979999862 Q ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHH Q ss_conf 23799961266565210012223221035662001124556766665113321110000001222222222222221034 Q gi|254780464|r 82 EHTSYHAWVLKEHVPLALEIIGDMLSNSSFNPSDIERERNVVLEEIGMSEDDSWDFLDARFSEMVWKDQIIGRPILGKPE 161 (424) Q Consensus 82 d~~~~~~~~~~~~~~~~l~ll~~~~~~p~~~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~f~~~~~~~~~~g~~~ 161 (424) |+++|++++++++++.+|+++++++.+|.|++++|+++|+++++|++...++|...+.+.+.+.+|+++||+++++|+.+ T Consensus 93 d~t~~~~~~~~~~~~~~l~ll~~~~~~p~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~ 172 (446) T 1pp9_A 93 EHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSE 172 (446) T ss_dssp SCEEEEEEEEGGGHHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCHH T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH T ss_conf 60899999775777776899999976678897998889999887652023581889999999986378974566867999 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCC---CCCCCCCEE-EEECCCCCCCE Q ss_conf 42000166776420112456630000025455122112211012358777788664---223322102-33036843210 Q gi|254780464|r 162 TISSFTPEKIISFVSRNYTADRMYVVCVGAVDHEFCVSQVESYFNVCSVAKIKESM---KPAVYVGGE-YIQKRDLAEEH 237 (424) Q Consensus 162 ~i~~lt~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~---~p~~~~~~~-~~~~~~~~~~~ 237 (424) +|++++.++|++||++||+|+||+|+|+||+|+++++++++++|+.||........ .|....... .....+.++.+ T Consensus 173 ~i~~~t~~~l~~f~~~~y~p~n~~i~i~Gd~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446) T 1pp9_A 173 NVRKLSRADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLAH 252 (446) T ss_dssp HHHHCCHHHHHHHHHHHCCGGGEEEEEEESCCHHHHHHHHHHHHTTSCSCCCSSCCCCCCCCCCCCEEEEEEETTSSSEE T ss_pred HHHHCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHH T ss_conf 99748999999999871698735999736830777899999985258888887777888864347761167458865302 Q ss_pred EEECCCCCCCCCCHHHHHHHHHHHHH--------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHH Q ss_conf 23010000135211356899877762--------4876532222000268621013332221012201344425830247 Q gi|254780464|r 238 MMLGFNGCAYQSRDFYLTNILASILG--------DGMSSRLFQEVREKRGLCYSISAHHENFSDNGVLYIASATAKENIM 309 (424) Q Consensus 238 i~~~~~~~~~~~~d~~al~ll~~iLg--------~g~sSrL~~~lRe~~glaY~v~s~~~~~~~~g~~~i~~~~~~~~~~ 309 (424) +.++|++++..++|++++.+++.+|| ++++|||++++|+++|++|+++++...+.+.|+|.+++.+.+++.. T Consensus 253 ~~~~~~~~~~~~~d~~~l~vl~~iLg~~~~~~~~~~~~s~l~~~~re~~gl~y~~~s~~~~~~~~g~~~i~~~~~~~~~~ 332 (446) T 1pp9_A 253 VAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSID 332 (446) T ss_dssp EEEEEEECCTTCTHHHHHHHHHHHHCEEETTCSCGGGCSSHHHHHHHHHTCCSEEEEEEEECSSCEEEEEEEEECTTSHH T ss_pred HHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCHH T ss_conf 21001356742124799999999863122102456643058899998617732788852146777259999963864088 Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH Q ss_conf 77877899998531489989999999999999985138989999999999996898479899999887279899999999 Q gi|254780464|r 310 ALTSSIVEVVQSLLENIEQREIDKECAKIHAKLIKSQERSYLRALEISKQVMFCGSILCSEKIIDTISAITCEDIVGVAK 389 (424) Q Consensus 310 ~~~~~i~~~i~~l~~~i~~~el~~ak~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~i~~vt~~di~~~~~ 389 (424) ++++.+.+++..+.++++++||+++|+.++.++....+++..++..++++.+.++++.+++++.+.|++||++||+++++ T Consensus 333 ~~~~~i~~~~~~l~~~~~~~el~~ak~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~e~~~~i~~VT~~dv~~~a~ 412 (446) T 1pp9_A 333 DMMFVLQGQWMRLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCS 412 (446) T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHTSSCCCHHHHHHHHHTCCHHHHHHHHH T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH T ss_conf 89999999999972479999999999999999999666999999999999997699889999999997889999999999 Q ss_pred HHCCCC-CEEEEEECCCCCCCCHHHHHHHHH Q ss_conf 862778-779998166010899899999884 Q gi|254780464|r 390 KIFSST-PTLAILGPPMDHVPTTSELIHALE 419 (424) Q Consensus 390 ~~l~~~-~~i~~vgp~~~~~P~~~~l~~~l~ 419 (424) +||.++ .+++++| |.+.+|+.++|++.+. T Consensus 413 ~~~~~~~~~~~v~g-p~~~~p~~~~i~~~~~ 442 (446) T 1pp9_A 413 KYFYDQCPAVAGFG-PIEQLPDYNRIRSGMF 442 (446) T ss_dssp HHTTTCCCEEEEEE-SCTTSCCHHHHHHTTC T ss_pred HHCCCCCCEEEEEC-CHHHCCCHHHHHHHHH T ss_conf 86588997899988-7253879999984403

HHsearch results for GI: 254780464 and protein with PDBid: 1pp9_A