HHsearch results for GI: 254780464 and protein with PDBid: 1pp9_B
>1pp9_B Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron sulfur protein, cytochrome B; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* 1bcc_B* ...
Probab=98.19 E-value=3.2e-05 Score=52.52 Aligned_cols=164 Identities=9% Similarity=0.024 Sum_probs=100.5
Q ss_pred CCCCCCCEEEECCCCCCCCC-CHHH-HHHHHHHHHHCCCCCC----CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 36843210230100001352-1135-6899877762487653----2222000268621013332221012201344425
Q gi|254780464|r 230 KRDLAEEHMMLGFNGCAYQS-RDFY-LTNILASILGDGMSSR----LFQEVREKRGLCYSISAHHENFSDNGVLYIASAT 303 (424)
Q Consensus 230 ~~~~~~~~i~~~~~~~~~~~-~d~~-al~ll~~iLg~g~sSr----L~~~lRe~~glaY~v~s~~~~~~~~g~~~i~~~~ 303 (424)
....+...+.+.+.+.+..+ ++.. ...++.+++..|...+ +.+.+ +..|. ....+...-...+++.|
T Consensus 39 ~~~~p~~~i~l~v~~Gs~~E~~~~~G~ahllehl~~~Gt~~~~~~~i~~~~-~~~G~------~~na~t~~~~t~y~~~~ 111 (439)
T 1pp9_B 39 ENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGI-EAVGG------KLSVTSTRENMAYTVEC 111 (439)
T ss_dssp CCCCSEEEEEEEESCSGGGCCTTSTTHHHHHHHTTTSCBSSSCHHHHHHHH-HHTTC------EEEEEECSSCEEEEEEE
T ss_pred ECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH-HHHCC------EEEEEECCCEEEEEEEE
T ss_conf 589987999999821237889797649999999984799988999999999-98399------89999835718999997
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHCCCHH
Q ss_conf 8302477787789999853148998999999999999998513898999999999999689847-989999988727989
Q gi|254780464|r 304 AKENIMALTSSIVEVVQSLLENIEQREIDKECAKIHAKLIKSQERSYLRALEISKQVMFCGSIL-CSEKIIDTISAITCE 382 (424)
Q Consensus 304 ~~~~~~~~~~~i~~~i~~l~~~i~~~el~~ak~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~-~~~~~~~~i~~vt~~ 382 (424)
..++.+.+++.+.+.+.. -.++++++++.|..++..+....+++..++.......+++.+.. ...--.+.|+++|.+
T Consensus 112 ~~~~~~~~l~ll~~~~~~--p~~~~~~~~~ek~~i~~e~~~~~~~p~~~~~~~l~~~~f~~~~~~~~~g~~~~i~~lt~~ 189 (439)
T 1pp9_B 112 LRDDVDILMEFLLNVTTA--PEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPV 189 (439)
T ss_dssp EGGGHHHHHHHHHHHHHC--BCCCHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHBSSGGGSCSSCCGGGTTTCCHH
T ss_pred CHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHH
T ss_conf 463179999999732137--610399999999888787666404828888999999834355688745676662436899
Q ss_pred HHHHHHHHHCCCCCEEEEEE
Q ss_conf 99999998627787799981
Q gi|254780464|r 383 DIVGVAKKIFSSTPTLAILG 402 (424)
Q Consensus 383 di~~~~~~~l~~~~~i~~vg 402 (424)
|++++.++++.++..+++++
T Consensus 190 ~l~~f~~~~y~p~n~~iv~~ 209 (439)
T 1pp9_B 190 ELHDYVQNHFTSARMALIGL 209 (439)
T ss_dssp HHHHHHHHHCSGGGEEEEEE
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999985058676376547