HHsearch results for GI: 254780464 and protein with PDBid: 1q2l_A

>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=100.00  E-value=0  Score=427.41  Aligned_cols=403  Identities=18%  Similarity=0.184  Sum_probs=322.4

Q ss_pred             CEEEEECCCCCEEEEECCC-CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHHCCEEEEEE
Q ss_conf             6189987987199998589-98799999983311448888983489999897335688898-899999997087679975
Q gi|254780464|r    2 NLRISKTSSGITVITEVMP-IDSAFVKVNIRAGSRNERQEEHGMAHFLEHMLFKGTTKRTA-KEIVEEIEKVGGDINAYT   79 (424)
Q Consensus         2 ~~~~~~L~NGl~v~~~~~~-~~~~~i~~~~~~Gs~~e~~~~~G~ah~lehl~~~gt~~~~~-~~~~~~l~~~G~~~na~t   79 (424)
                      .++..||+|||+|++.+++ .+.+++++++++||.+||++++|+||++|||+|+||++||. .++.+.++.+||.+||+|
T Consensus        20 ~y~~~~L~NGl~~~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAH~lEHm~F~Gs~k~p~~~~~~~~l~~~g~~~NA~T   99 (939)
T 1q2l_A           20 QYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNAST   99 (939)
T ss_dssp             EEEEEEETTSCEEEEEECTTCSSEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             53899958999999999799987999999772568889979757999999980899999976799999998499168897


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCH
Q ss_conf             32237999612665652100122232210356620011245567666651133211100000012222222222222210
Q gi|254780464|r   80 SLEHTSYHAWVLKEHVPLALEIIGDMLSNSSFNPSDIERERNVVLEEIGMSEDDSWDFLDARFSEMVWKDQIIGRPILGK  159 (424)
Q Consensus        80 ~~d~~~~~~~~~~~~~~~~l~ll~~~~~~p~~~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~f~~~~~~~~~~g~  159 (424)
                      +.|.|+|++++++++++.+|+++++++.+|.|+++.|++||++|.+|++...++|..++.+.+...+|++|||+++++|+
T Consensus       100 ~~d~T~Y~~~~~~~~l~~~l~~~~d~~~~p~~~~~~~~~E~~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~  179 (939)
T 1q2l_A          100 APYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGN  179 (939)
T ss_dssp             CSSCEEEEEEECGGGHHHHHHHHHHHHHCBCCCSTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHSSCTTSGGGSCCSCC
T ss_pred             CCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             68748999996789999999999999837999999999999999999986129979999999999707889998899899


Q ss_pred             HHHHHHH----HHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC--CCCCCC---EEEEEC
Q ss_conf             3442000----1667764201124566300000254551221122110123587777886642--233221---023303
Q gi|254780464|r  160 PETISSF----TPEKIISFVSRNYTADRMYVVCVGAVDHEFCVSQVESYFNVCSVAKIKESMK--PAVYVG---GEYIQK  230 (424)
Q Consensus       160 ~~~i~~l----t~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~~--p~~~~~---~~~~~~  230 (424)
                      .++|+.+    ++++|++||++||+|+||+|+|+||+|++++.++|+++|+.||..+.+.+..  |.....   ......
T Consensus       180 ~~~l~~~~~~~~~~~l~~Fy~~~Y~p~n~~lvi~Gd~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (939)
T 1q2l_A          180 LETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYV  259 (939)
T ss_dssp             HHHHSCBTTBCHHHHHHHHHHHHCCTTTCEEEEEESSCHHHHHHHHHHTGGGSCCCCCCCCCCCSCSCCGGGSSEEEEEC
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             85897541133799999999985895356999934533899999999985005677889976666566621246411236


Q ss_pred             CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--CCCCEEEEEECC---C
Q ss_conf             68432102301000013521135689987776248765322220002686210133322210--122013444258---3
Q gi|254780464|r  231 RDLAEEHMMLGFNGCAYQSRDFYLTNILASILGDGMSSRLFQEVREKRGLCYSISAHHENFS--DNGVLYIASATA---K  305 (424)
Q Consensus       231 ~~~~~~~i~~~~~~~~~~~~d~~al~ll~~iLg~g~sSrL~~~lRe~~glaY~v~s~~~~~~--~~g~~~i~~~~~---~  305 (424)
                      .+..+..+.++|+.++..+++..+...+...|.++.+++++..++.+.|++|+++++.....  ..+.+.+.....   .
T Consensus       260 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  339 (939)
T 1q2l_A          260 PALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGL  339 (939)
T ss_dssp             CSSCCCEEEEEEEEECCGGGGGGCHHHHHHHHHHCCCTTSHHHHHHHTTCEEEEEEEEESSTTSSEEEEEEEEEECHHHH
T ss_pred             CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCC
T ss_conf             52311089999733885437789999999998379854003999986386127988524223677632555552044452


Q ss_pred             CHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
Q ss_conf             0247778778999985314-89989999999999999985138-989999999999996898479899999887279899
Q gi|254780464|r  306 ENIMALTSSIVEVVQSLLE-NIEQREIDKECAKIHAKLIKSQE-RSYLRALEISKQVMFCGSILCSEKIIDTISAITCED  383 (424)
Q Consensus       306 ~~~~~~~~~i~~~i~~l~~-~i~~~el~~ak~~~~~~~~~~~~-~~~~~a~~l~~~~~~~~~~~~~~~~~~~i~~vt~~d  383 (424)
                      ....+++..+.+.+..+.+ ++.++++++.++........... .+...+..++.....+ .+.........+..++.++
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~  418 (939)
T 1q2l_A          340 ANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRV-PVEHTLDAVNIADRYDAKA  418 (939)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHTTS-CGGGTTTTTTCCCCCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHHCCHHH
T ss_conf             209999999999999998667278889999999999898752056256899999998538-9766444778887469999


Q ss_pred             HHHHHHHHCCCCCEEEEEECCC
Q ss_conf             9999998627787799981660
Q gi|254780464|r  384 IVGVAKKIFSSTPTLAILGPPM  405 (424)
Q Consensus       384 i~~~~~~~l~~~~~i~~vgp~~  405 (424)
                      ++++.+.+...+..++++.|+.
T Consensus       419 ~~~~~~~l~~~n~~~~~~~~~~  440 (939)
T 1q2l_A          419 VKERLAMMTPQNARIWYISPKE  440 (939)
T ss_dssp             HHHHHHHCSGGGCEEEEECTTC
T ss_pred             HHHHHHHHCCCCEEEEEEECCC
T ss_conf             9999997452263899992587