PSIBLAST alignment of GI: 254780464 and protein with PDB id: 1hr6
>gi|15826320|pdb|1HR6|B Chain B, Yeast Mitochondrial Processing Peptidase Length = 443
>gi|15826322|pdb|1HR6|D Chain D, Yeast Mitochondrial Processing Peptidase Length = 443
>gi|15826324|pdb|1HR6|F Chain F, Yeast Mitochondrial Processing Peptidase Length = 443
>gi|15826326|pdb|1HR6|H Chain H, Yeast Mitochondrial Processing Peptidase Length = 443
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 117/437 (26%), Positives = 197/437 (45%), Gaps = 21/437 (4%)
Query: 4 RISKTSSGITVITEVMP-IDSAFVKVNIRAGSRNERQEEHGMAHFLEHMLFKGTTKRTAK 62
R SK +G+T+ TE +P SA V + + AGSR E + +G AHFLEH+ FKGT R +
Sbjct: 8 RTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQNRPQQ 67
Query: 63 EIVEEIEKVGGDINAYTSLEHTSYHAWVLKEHVPLALEIIGDMLSNSSFNPSDIERERNV 122
I EIE +G +NAYTS E+T Y+A L+E +P A++I+ D+L+ S + S IERER+V
Sbjct: 68 GIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIERERDV 127
Query: 123 VLEEIGMSEDDSWDFLDARFSEMVWKDQIIGRPILGKPETISSFTPEKIISFVSRNYTAD 182
++ E + + + E+ +KDQ +GR ILG + I S T + ++++NY D
Sbjct: 128 IIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKNYKGD 187
Query: 183 RMYVVCVGAVDHEFCVSQVESYFNVC-----------SVAKIKESMKPAVYVGGEYIQKR 231
RM + GAVDHE V + YF + + ++ +
Sbjct: 188 RMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENTLPTT 247
Query: 232 DLAEEHMMLGFNGCAYQSRDFYLTNILASILGDGMSSRLFQEVREKRGLC----YSISAH 287
+A + ++ Y + G + + S +
Sbjct: 248 HIAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSF 307
Query: 288 HENFSDNGVLYIASATAKENIMAL---TSSIVEVVQSLLENIEQREIDKECAKIHAKLIK 344
+++D+G+ + T + E + I E+++ A++ A L+
Sbjct: 308 STSYADSGLWGMYIVTDSNEHNVRLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLL 367
Query: 345 SQERSYLRALEISKQVMFCGSILCSEKIIDTISAITCEDIVGVAKKIFSSTP-TLAILGP 403
S + S +I +QV+ G L E++ + + IT +DI+ A + P ++ LG
Sbjct: 368 SLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVALG- 426
Query: 404 PMDHVPTTSELIHALEG 420
VP S + L
Sbjct: 427 NTSTVPNVSYIEEKLNQ 443