RPSBLAST alignment of GI: 254780464 and protein with PDBid: 1q2l

>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939
 Score = 91.6 bits (226), Expect = 3e-19
 Identities = 36/357 (10%), Positives = 114/357 (31%), Gaps = 10/357 (2%)

Query: 51  MLFKGTTKRTAKEIVEEIEKVGGDINAYTSLEHTSYHAWVLKEHVPLALEIIGDMLSNSS 110
            L          ++  +    G   +   +      +A    + +P   + + +   + +
Sbjct: 547 ALNDYLAGLALDQLSNQASVGGISFSTNAN-NGLMVNANGYTQRLPQLFQALLEGYFSYT 605

Query: 111 FNPSDIERERNVVLEEIGMSEDDSWDFLDARFSEMVWKDQIIGRPILGKPETISSFTPEK 170
                +E+ ++   + +  +E           ++M+ +          + + + S T ++
Sbjct: 606 ATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPY--FSRDERRKILPSITLKE 663

Query: 171 IISFVSRNYTADRMYVVCVGAVDHEFCVSQVESYFNVCSVAKIKESMKPAVYV--GGEYI 228
           ++++     +  R   + +G +      +              +      V V      I
Sbjct: 664 VLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVI 723

Query: 229 QKRDLAEEHMMLGFNGCAYQSRDFYLTNILASILGDGMSSRLFQEVREKRGLCYSISAHH 288
            ++        L          ++  ++  +S+LG  +    + ++R +  L Y++ A  
Sbjct: 724 FEKAGNSTDSALAAVFVPTGYDEYT-SSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFP 782

Query: 289 ENFSDNGVLYIASATAKENIMALTSSIVEVVQSL---LENIEQREIDKECAKIHAKLIKS 345
            +      +     +  +    L         +    L  ++  E  +    +  +++++
Sbjct: 783 MSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQA 842

Query: 346 QERSYLRALEISKQVMFCGSILCS-EKIIDTISAITCEDIVGVAKKIFSSTPTLAIL 401
            +     A ++SK          S +KI+  I  +T + +     +       +AIL
Sbjct: 843 PQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVVEPQGMAIL 899