RPSBLAST alignment of GI: 254780464 and protein with PDBid: 3cx5
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431
Score = 261 bits (667), Expect = 2e-70
Identities = 78/419 (18%), Positives = 165/419 (39%), Gaps = 27/419 (6%)
Query: 5 ISKTSSGITVITEVMP-IDSAFVKVNIRAGSRNERQEEHGMAHFLEHMLFKGTTKRTAKE 63
+++ S+GI V TE P +A V V +G+ NE +G+++ +++
Sbjct: 3 VTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAV--- 59
Query: 64 IVEEIEKVGGDINAYTSLEHTSYHAWVLKEHVPLALEIIGDMLSN---SSFNPSDIERER 120
K G +++ S + SY L +L+ + + + S+ E +
Sbjct: 60 ----AAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATK 115
Query: 121 NVVLEEIGMSEDD-SWDFLDARFSEMVWKDQIIGRPILGKPETISSFTPEKIISFVSRNY 179
VL+++ ED+ + + +++ + P G E++ + + SF + ++
Sbjct: 116 KSVLKQVQDFEDNDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHF 175
Query: 180 TADRMYVVCVGAVDHEFCVSQVESYF-NVCSVAKIKESMKPAVYVGGEYIQKRDLAEEHM 238
VV G + HE V+ +ES ++ + K K A ++ L + +
Sbjct: 176 LNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWI 235
Query: 239 MLGFNGCAYQSRDFYLTNILASILGDGMSS---------RLFQEVREKRGLCYSISAHHE 289
L G S ++++ + A I G + +L ++E LC + +
Sbjct: 236 SLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEY-QLCDNFNHFSL 294
Query: 290 NFSDNGVLYIASATAKEN-IMALTSSIVEVVQSLLENIEQREIDKECAKIHAKLIKSQER 348
++ D+G+ ++AT I L ++ L ++ E+++ + + +L + E
Sbjct: 295 SYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYES 354
Query: 349 --SYLRALEISKQVMFCGSILCSEKIIDTISAITCEDIVGVAKKIF-SSTPTLAILGPP 404
A + +V+ GS L + I AIT +D+ A K +A G
Sbjct: 355 GNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQI 413