HHsearch alignment for GI: 254780465 and conserved domain: PRK06608
>PRK06608 threonine dehydratase; Provisional.
Probab=99.67 E-value=1.3e-13 Score=114.69 Aligned_cols=273 Identities=16% Similarity=0.107 Sum_probs=169.7
Q ss_pred CCEEEEC-------CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 8604772-------488254662138981206823888999999997317982079971665404679998616678559
Q gi|254780465|r 88 VTPLIQL-------NANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINM 160 (469)
Q Consensus 88 ~~pl~~l-------~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v 160 (469)
T Consensus 24 ~TPl~~~~~Ls~~~g~~v~lK~E~~qptGSfK~RGa~~~---i~~~~~~g~~~~~vv~aSsGNhG~alA~aa~-~~G~~~ 99 (330)
T PRK06608 24 LTPIVHSESLNEMLGHEIFFKVESLQKTGAFKVRGVLNH---LLELKEQGKLPDKIVAYSTGNHGIAVAYASK-LFGIKT 99 (330)
T ss_pred CCCEEEHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHH---HHHHHHCCCCCCCEEEECCCCHHHHHHHHHH-HCCCCE
T ss_conf 885535477789869989998514797688899999999---9999876987783798678866999999998-549863
Q ss_pred EEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHH
Q ss_conf 99735776760332131134478708997179658889999997501543135831134556544401105589999987
Q gi|254780465|r 161 YILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIA 240 (469)
Q Consensus 161 ~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~ 240 (469)
T Consensus 100 ~I~mP~~-~~~~Ki~~i~~~-GAeV--i~~~-~~~~~~~~~~~~~~~----~~~~i~~~d~--~~~iaG~~Ti~~Ei~eq 168 (330)
T PRK06608 100 RIYLPLN-TSKVKQQAALYY-GGEV--ILTN-TRQEAEEKAKEDEKQ----GFYYIHPSDS--DSIIAGAGTLCYEALQQ 168 (330)
T ss_pred EEEECCC-CCHHHHHHHHHC-CCEE--EEEC-CHHHHHHHHHHHHHC----CCEEECCCCC--CCHHCCCCHHHHHHHHH
T ss_conf 8984565-889999999987-9999--9989-858999999986145----8889578788--00104643399999998
Q ss_pred HCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECC-CCCHHHHHHHCCCHH-CCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 44778873899634657887886677750898770587236-763356775322201-0234556564200134013788
Q gi|254780465|r 241 LGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATN-ENDTLVRMFDMGMYR-PEIVMETTSPAMDIQIPSNFER 318 (469)
Q Consensus 241 ~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN-~NdiL~rf~~tG~y~-~~~~~~T~SpsMDI~v~SNfER 318 (469)
T Consensus 169 ~~~--~~D~vvv~vGgGgl~~G~~~~~k~~~p~~~vigvEp~~a~~~~~s~~~G~~~~~~~~~~tiadGl~~~~~~--~~ 244 (330)
T PRK06608 169 LGF--SPDAIFASCGGGGLISGSYLAKELISPTSLLIGSEPLNANDAYLSLKNNKIYRLNYSPNTIADGLKTLSVS--AR 244 (330)
T ss_pred HCC--CCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCEEECCEECCCCC--HH
T ss_conf 199--98889954897247999999998529997899989888689999998399387057887565451458733--88
Q ss_pred HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
Q ss_conf 99987097089999998752026510552022110001213421388999999999998639598383399999999987
Q gi|254780465|r 319 LLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACR 398 (469)
Q Consensus 319 llf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~ 398 (469)
T Consensus 245 -~~~~~---------------------------~~~-d--~~v~V~d~ei~~a~~~L~~~~gi~vEps~a~alAall~~~ 293 (330)
T PRK06608 245 -TFEYL---------------------------KKL-D--DFYLVEEYEIYYWTAWLTHLLKVICEPSSAINMASVVNWL 293 (330)
T ss_pred -HHHHH---------------------------HHC-C--CEEEECHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHC
T ss_conf -99999---------------------------628-9--7899899999999999999859698299999999999837
Q ss_pred --HCCCCCEEEEEC
Q ss_conf --479983999971
Q gi|254780465|r 399 --KSSSTPMVTLAT 410 (469)
Q Consensus 399 --~~~~~p~VvLAT 410 (469)
T Consensus 294 ~~~~~~~~Vvvils 307 (330)
T PRK06608 294 KTQSKPQKLLVLLS 307 (330)
T ss_pred HHHCCCCEEEEECC
T ss_conf 75489896999907