HHsearch alignment for GI: 254780465 and conserved domain: TIGR01138

>TIGR01138 cysM cysteine synthase B; InterPro: IPR005858 Cysteine synthase B (O-acetylserine (thiol)-lyase, 2.5.1.47 from EC) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK (IPR005859 from INTERPRO) in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=97.13  E-value=0.0032  Score=42.66  Aligned_cols=235  Identities=21%  Similarity=0.230  Sum_probs=136.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCC--CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECC
Q ss_conf             389812068238889999999973179--820799716654046799986166785599973577676033213113447
Q gi|254780465|r  105 HGPTLSFKDIAMQFIAELMDHILEERD--HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEA  182 (469)
Q Consensus       105 HGPT~aFKD~a~q~l~~~~~~~l~~~~--~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~  182 (469)
T Consensus        35 ~NPaGSVKDRpALS---M~~~A~~RG~Ik~G~vlI~ATSGNTGIALAM~aA-~~G~~~~L~MP~N-~s~ERk~~~~AyGA  109 (300)
T TIGR01138        35 NNPAGSVKDRPALS---MILDAEKRGEIKPGDVLIEATSGNTGIALAMVAA-LKGYKMELLMPDN-VSEERKAAMKAYGA  109 (300)
T ss_pred             CCCCCCCCHHHHHH---HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH-HCCCEEEEECCCC-CHHHHHHHHHHCCC
T ss_conf             59998743157899---9998985588568887897168867899999998-5594289977877-45799999986295


Q ss_pred             CCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCC-C-CCCCCCCHHHCCCCHHHHHHHHHHH-CCCCCCEE-EEEECCCHH
Q ss_conf             870899717965888999999750154313583-1-1345565444011055899999874-47788738-996346578
Q gi|254780465|r  183 SNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVN-L-SGINSINWARIMAQIVYYFVSSIAL-GSPNRNIS-FSVPTGNFG  258 (469)
Q Consensus       183 ~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~-l-~s~NSIN~~Ril~Q~vyYf~a~~~~-~~~~~~i~-f~VPtGNfG  258 (469)
T Consensus       110 ~L~L~~~~~G~-~GA~~l~~~l~~~~~--~Kyv~LDQf~Np~Np------~AHy~sTG~EIW~QT~G~ITHFVss~GT~G  180 (300)
T TIGR01138       110 ELILVDKEEGM-EGARDLARELVQKGE--GKYVLLDQFNNPDNP------KAHYYSTGPEIWQQTGGRITHFVSSMGTTG  180 (300)
T ss_pred             EEEEECCCCCC-HHHHHHHHHHHHHCC--CCEEEEEECCCCCCC------CCCEEECCCHHEECCCCEEEEEEECCCCCC
T ss_conf             48984423561-568999999997379--856997405698886------455331680000058972889872368884


Q ss_pred             HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             878866777508987705872367633567753222010234556564200134013-7889998709708999999875
Q gi|254780465|r  259 DIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSN-FERLLFEISGRNSLLVKEAFYS  337 (469)
Q Consensus       259 ni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SN-fERllf~l~~~d~~~v~~~m~~  337 (469)
T Consensus       181 TI~G--~sR~---------------------lk--~~~~~v~ivGlQP~~----g~~GI~--------------------  211 (300)
T TIGR01138       181 TIMG--VSRY---------------------LK--EQNPNVQIVGLQPAE----GSAGIP--------------------  211 (300)
T ss_pred             EEEC--CEEE---------------------EE--ECCCCEEEEEECCCC----CCCCCC--------------------
T ss_conf             1431--0323---------------------32--218852699712788----766776--------------------


Q ss_pred             HCCCCCCCCCCHHHHHHHCCCCCC------CCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH---CCCCCEEEE
Q ss_conf             202651055202211000121342------13889999999999986395983833999999999874---799839999
Q gi|254780465|r  338 LENKKYFRIDSEHLQKMSLSFSAK------RASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACRK---SSSTPMVTL  408 (469)
Q Consensus       338 l~~~g~~~i~~~~l~~l~~~f~s~------svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~~---~~~~p~VvL  408 (469)
T Consensus       212 ----G~~~~~~~~~---P~Ifd~~~~D~~~~~~~~dA~~~~R~LA~~~~IF~G~SSG~A~~a~l~lar~~~~kGekaV~V  284 (300)
T TIGR01138       212 ----GIRRWPSEYL---PGIFDASLVDRVIDVHQEDAEDIMRELAKKEGIFCGVSSGGAVAAALRLARELAKKGEKAVIV  284 (300)
T ss_pred             ----CCCCCCHHCC---CCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             ----3211610138---852241010203551116689999998764765874071899999999988643048833899


Q ss_pred             E
Q ss_conf             7
Q gi|254780465|r  409 A  409 (469)
Q Consensus       409 A  409 (469)
T Consensus       285 a  285 (300)
T TIGR01138       285 A  285 (300)
T ss_pred             E
T ss_conf             9