HHsearch alignment for GI: 254780465 and conserved domain: TIGR01138
>TIGR01138 cysM cysteine synthase B; InterPro: IPR005858 Cysteine synthase B (O-acetylserine (thiol)-lyase, 2.5.1.47 from EC) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK (IPR005859 from INTERPRO) in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=97.13 E-value=0.0032 Score=42.66 Aligned_cols=235 Identities=21% Similarity=0.230 Sum_probs=136.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCC--CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECC
Q ss_conf 389812068238889999999973179--820799716654046799986166785599973577676033213113447
Q gi|254780465|r 105 HGPTLSFKDIAMQFIAELMDHILEERD--HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEA 182 (469)
Q Consensus 105 HGPT~aFKD~a~q~l~~~~~~~l~~~~--~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~ 182 (469)
T Consensus 35 ~NPaGSVKDRpALS---M~~~A~~RG~Ik~G~vlI~ATSGNTGIALAM~aA-~~G~~~~L~MP~N-~s~ERk~~~~AyGA 109 (300)
T TIGR01138 35 NNPAGSVKDRPALS---MILDAEKRGEIKPGDVLIEATSGNTGIALAMVAA-LKGYKMELLMPDN-VSEERKAAMKAYGA 109 (300)
T ss_pred CCCCCCCCHHHHHH---HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH-HCCCEEEEECCCC-CHHHHHHHHHHCCC
T ss_conf 59998743157899---9998985588568887897168867899999998-5594289977877-45799999986295
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCC-C-CCCCCCCHHHCCCCHHHHHHHHHHH-CCCCCCEE-EEEECCCHH
Q ss_conf 870899717965888999999750154313583-1-1345565444011055899999874-47788738-996346578
Q gi|254780465|r 183 SNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVN-L-SGINSINWARIMAQIVYYFVSSIAL-GSPNRNIS-FSVPTGNFG 258 (469)
Q Consensus 183 ~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~-l-~s~NSIN~~Ril~Q~vyYf~a~~~~-~~~~~~i~-f~VPtGNfG 258 (469)
T Consensus 110 ~L~L~~~~~G~-~GA~~l~~~l~~~~~--~Kyv~LDQf~Np~Np------~AHy~sTG~EIW~QT~G~ITHFVss~GT~G 180 (300)
T TIGR01138 110 ELILVDKEEGM-EGARDLARELVQKGE--GKYVLLDQFNNPDNP------KAHYYSTGPEIWQQTGGRITHFVSSMGTTG 180 (300)
T ss_pred EEEEECCCCCC-HHHHHHHHHHHHHCC--CCEEEEEECCCCCCC------CCCEEECCCHHEECCCCEEEEEEECCCCCC
T ss_conf 48984423561-568999999997379--856997405698886------455331680000058972889872368884
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 878866777508987705872367633567753222010234556564200134013-7889998709708999999875
Q gi|254780465|r 259 DIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSN-FERLLFEISGRNSLLVKEAFYS 337 (469)
Q Consensus 259 ni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SN-fERllf~l~~~d~~~v~~~m~~ 337 (469)
T Consensus 181 TI~G--~sR~---------------------lk--~~~~~v~ivGlQP~~----g~~GI~-------------------- 211 (300)
T TIGR01138 181 TIMG--VSRY---------------------LK--EQNPNVQIVGLQPAE----GSAGIP-------------------- 211 (300)
T ss_pred EEEC--CEEE---------------------EE--ECCCCEEEEEECCCC----CCCCCC--------------------
T ss_conf 1431--0323---------------------32--218852699712788----766776--------------------
Q ss_pred HCCCCCCCCCCHHHHHHHCCCCCC------CCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH---CCCCCEEEE
Q ss_conf 202651055202211000121342------13889999999999986395983833999999999874---799839999
Q gi|254780465|r 338 LENKKYFRIDSEHLQKMSLSFSAK------RASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACRK---SSSTPMVTL 408 (469)
Q Consensus 338 l~~~g~~~i~~~~l~~l~~~f~s~------svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~~---~~~~p~VvL 408 (469)
T Consensus 212 ----G~~~~~~~~~---P~Ifd~~~~D~~~~~~~~dA~~~~R~LA~~~~IF~G~SSG~A~~a~l~lar~~~~kGekaV~V 284 (300)
T TIGR01138 212 ----GIRRWPSEYL---PGIFDASLVDRVIDVHQEDAEDIMRELAKKEGIFCGVSSGGAVAAALRLARELAKKGEKAVIV 284 (300)
T ss_pred ----CCCCCCHHCC---CCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf ----3211610138---852241010203551116689999998764765874071899999999988643048833899
Q ss_pred E
Q ss_conf 7
Q gi|254780465|r 409 A 409 (469)
Q Consensus 409 A 409 (469)
T Consensus 285 a 285 (300)
T TIGR01138 285 A 285 (300)
T ss_pred E
T ss_conf 9