HHsearch alignment for GI: 254780465 and conserved domain: TIGR03528
>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase. Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.
Probab=98.82 E-value=7.8e-06 Score=60.80 Aligned_cols=289 Identities=15% Similarity=0.143 Sum_probs=171.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCEEEECCC---CCEEEEEC------CCCCCCCCCCHHHHH-HHHHHHHH---------
Q ss_conf 998999999999863047667860477248---82546621------389812068238889-99999997---------
Q gi|254780465|r 67 IKSSKLRDIVNRSYHCFRNAAVTPLIQLNA---NEFLLELF------HGPTLSFKDIAMQFI-AELMDHIL--------- 127 (469)
Q Consensus 67 i~~~~l~~ii~~ay~~f~~~~~~pl~~l~~---~~~vlELf------HGPT~aFKD~a~q~l-~~~~~~~l--------- 127 (469)
T Consensus 21 ~~~~~~~~~~-~fh~~~p~Y~pTPL~~l~~lA~~lgv~~i~vKDEs~RfgL~sFKaLGasyAi~~~l~~~~~~~~~~~~~ 99 (396)
T TIGR03528 21 LSKEEAEKVR-AFHQSFPGYQPTPLAELDNLAKHLGVGSILVKDESYRFGLNAFKVLGGSYAIGKYLAEKLGKDISELSF 99 (396)
T ss_pred CCHHHHHHHH-HHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 7999999999-999628889988632559999974988389966877689986575079999999999984898554798
Q ss_pred --------HCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHH
Q ss_conf --------317982079971665404679998616678559997357767603321311344787089971796588899
Q gi|254780465|r 128 --------EERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQK 199 (469)
Q Consensus 128 --------~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~ 199 (469)
T Consensus 100 ~~l~~~~~~~~~~~~t~vtATdGNHG~~VA~aA~-~lG~ka~I~mp~~-~~~~k~~air~-~--GAeVv~~~~~YDdav~ 174 (396)
T TIGR03528 100 EKLKSNEIREKLGDITFVTATDGNHGRGVAWAAN-QLGQKSVVYMPKG-SAQIRLENIRA-E--GAECTITDLNYDDAVR 174 (396)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH-HCCCCEEEEECCC-CCHHHHHHHHH-C--CCEEEEECCCHHHHHH
T ss_conf 8874399987506808998078718999999999-8599889991799-99999999997-5--9989997897799999
Q ss_pred HHHHHHCCHHHHCCCCCCC------CCCCCHHHCCCCHHHHHHHHHHHCCCC--CCEEEEEECCC--HHHHHHHHHHHHC
Q ss_conf 9999750154313583113------455654440110558999998744778--87389963465--7887886677750
Q gi|254780465|r 200 IVKNLFSDVFFCHSVNLSG------INSINWARIMAQIVYYFVSSIALGSPN--RNISFSVPTGN--FGDIFAGYMAKMM 269 (469)
Q Consensus 200 ~Vk~~f~D~~~~~~~~l~s------~NSIN~~Ril~Q~vyYf~a~~~~~~~~--~~i~f~VPtGN--fGni~Ag~~Ak~M 269 (469)
T Consensus 175 ~A~~~A~e----~g~~lV~Dtsw~gYediP~~Im~Gy~T~~~Ei~eQl~~~~~~~pthV~lq~GvGglaaav~~~~~~~~ 250 (396)
T TIGR03528 175 LAWKMAQE----NGWVMVQDTAWEGYEKIPTWIMQGYGTLALEALEQLKEQGVEKPTHVFLQAGVGSFAGAVQGYFASAY 250 (396)
T ss_pred HHHHHHHH----CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 99999986----59879705776671017388845399999999999885389889779982780078999999999972
Q ss_pred CCCCCEEE-EECCCCCHHHHHHHC--CCHHC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 89877058-723676335677532--22010-234556564200134013788999870970899999987520265105
Q gi|254780465|r 270 GLPIEKLI-IATNENDTLVRMFDM--GMYRP-EIVMETTSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFR 345 (469)
Q Consensus 270 GLPI~kli-~AtN~NdiL~rf~~t--G~y~~-~~~~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~ 345 (469)
T Consensus 251 ~~~~p~iivVEP~~A~c~~~S~~~~~g~p~~v~g~~~TIm~GL~cg~ps~l---aw~iL--------------------- 306 (396)
T TIGR03528 251 GEERPITVIVEPDAADCLYRSAIADDGKPHFVTGDMATIMAGLACGEPNTI---GWEIL--------------------- 306 (396)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCHHCCCCCCCCCHH---HHHHH---------------------
T ss_conf 778987999786433066798986179827607984121112457998637---89999---------------------
Q ss_pred CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH----HCCCEECCCHHHHHHHHHHH
Q ss_conf 52022110001213421388999999999998----63959838339999999998
Q gi|254780465|r 346 IDSEHLQKMSLSFSAKRASMEDVNSVIKSVLE----KSNYLVDPHTAVGIHAALAC 397 (469)
Q Consensus 346 i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~----~~gyiiDPHTAvG~~aa~~~ 397 (469)
T Consensus 307 ------~~~vd--~~vtV~D~~~a~amr~La~~~~~d~~I~sGesGAagla~L~~~ 354 (396)
T TIGR03528 307 ------RDYAS--QFISCPDWVAAKGMRILGNPLKGDPRVISGESGAVGTGLLAAV 354 (396)
T ss_pred ------HHCCC--EEEEECHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHH
T ss_conf ------96299--7999877999999999837557999863367436889999999