HHsearch results for GI: 254780465 and protein with PDBid: 1v71_A
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=99.79 E-value=2.3e-17 Score=139.31 Aligned_cols=274 Identities=15% Similarity=0.059 Sum_probs=182.1
Q ss_pred CCEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 86047724-------88254662138981206823888999999997317982079971665404679998616678559
Q gi|254780465|r 88 VTPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINM 160 (469)
Q Consensus 88 ~~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v 160 (469)
.+||.++. .++|+=-=++-||+||||.++..+ +... .+......|+++|||.+|.|.+.+.+ .-++++
T Consensus 26 ~TPl~~~~~L~~~~g~~i~~K~E~~nptGS~KdRga~~~---l~~~-~~~~~~~~vv~~ssGN~g~a~A~~a~-~~g~~~ 100 (323)
T 1v71_A 26 KTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNA---LSQL-NEAQRKAGVLTFSSGNHAQAIALSAK-ILGIPA 100 (323)
T ss_dssp CCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHH---HTTC-CHHHHHHCEEECCSSHHHHHHHHHHH-HTTCCE
T ss_pred CCCEEEHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH---HHHH-HHCCCCCEEEEECCCCHHHHHHHHHC-CCCCCE
T ss_conf 897668356538879969999778998789899999999---9987-76157776998479728899998720-054321
Q ss_pred EEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHH
Q ss_conf 99735776760332131134478708997179658889999997501543135831134556544401105589999987
Q gi|254780465|r 161 YILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIA 240 (469)
Q Consensus 161 ~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~ 240 (469)
.|+.|.+ .|+....+|....+ .++.+++++|+|+..++++-.+.. -+.+...| |+.++..+..-....+.|
T Consensus 101 ~i~~p~~-~~~~k~~~~~~~Ga---~vi~~~~~~~~~~~~a~~~a~~~~---~~~~~~~~--~~~~~~g~~t~~~Ei~~q 171 (323)
T 1v71_A 101 KIIMPLD-APEAKVAATKGYGG---QVIMYDRYKDDREKMAKEISEREG---LTIIPPYD--HPHVLAGQGTAAKELFEE 171 (323)
T ss_dssp EEEEETT-CCHHHHHHHHHTTC---EEEEECTTTTCHHHHHHHHHHHHT---CBCCCSSS--SHHHHHHHTHHHHHHHHH
T ss_pred EECCCCC-CCHHHHHHHHHCCC---CEEEECCCCHHHHHHHHHHHHHCC---CEECCCCC--CHHHHHHHHHHHHHHHHH
T ss_conf 5226777-88899999998299---779955741379999999998639---99469888--467999999999999985
Q ss_pred HCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE-CCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 447788738996346578878866777508987705872-3676335677532220102345565642001340137889
Q gi|254780465|r 241 LGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA-TNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFERL 319 (469)
Q Consensus 241 ~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A-tN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERl 319 (469)
+. ++-.+++|+|+-|++.+.+.+.+..-|--+++.. ....+.+.+.+..|.........+.+..+.+..++.+--
T Consensus 172 ~~---~~d~vv~~~G~Gg~~~Gi~~~~~~~~~~~~ii~v~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 247 (323)
T 1v71_A 172 VG---PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTF- 247 (323)
T ss_dssp HC---CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSCCHHHH-
T ss_pred HC---CCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCHHHH-
T ss_conf 48---98999993782788999999999759985386114455514655213686311577633325545577656779-
Q ss_pred HHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHC-CCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
Q ss_conf 9987097089999998752026510552022110001-213421388999999999998639598383399999999987
Q gi|254780465|r 320 LFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSL-SFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACR 398 (469)
Q Consensus 320 lf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~-~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~ 398 (469)
.+ +++ .-....|+|+|+...+|.+++++|.+++|.+|++++|+++++
T Consensus 248 --~~------------------------------~~~~~~~~v~V~d~e~~~a~r~l~~~eGi~~eps~a~~~Aa~~~~~ 295 (323)
T 1v71_A 248 --SI------------------------------IKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMK 295 (323)
T ss_dssp --HH------------------------------HHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGGHHHHHHHHTG
T ss_pred --HH------------------------------HHHCCCCEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH
T ss_conf --99------------------------------9744885067889999999999999829677188999999999868
Q ss_pred HC-CCCCEEEEECC
Q ss_conf 47-99839999718
Q gi|254780465|r 399 KS-SSTPMVTLATA 411 (469)
Q Consensus 399 ~~-~~~p~VvLATA 411 (469)
.. .+..+|++-|-
T Consensus 296 ~~~~~~~Vv~vl~G 309 (323)
T 1v71_A 296 EKLKNKRIGIIISG 309 (323)
T ss_dssp GGGTTCEEEEEECB
T ss_pred HHCCCCCEEEEECC
T ss_conf 87699909999488