HHsearch results for GI: 254780465 and protein with PDBid: 1vb3_A
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=0 Score=1079.91 Aligned_cols=426 Identities=34% Similarity=0.555 Sum_probs=394.3
Q ss_pred CCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 93261789888888899986156787863286107888988998770999899999999875157899899999999986
Q gi|254780465|r 1 MKYISTRNVDLSLGFCDTILSGLATDGGLYIPKYIPRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSY 80 (469)
Q Consensus 1 M~y~STRg~~~~~~f~~a~~~Gla~DGGL~vP~~~p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay 80 (469)
|||+||||+.+.+||+|||++|||+|||||||++||+++.++|.+|+++||.|+|++|+++|++++|++++|++|+++||
T Consensus 1 M~y~Str~~~~~~~f~~a~~~gla~dgGLyvP~~~p~~~~~~~~~~~~~sy~~~a~~i~~~f~~~~~~~~~l~~~~~~a~ 80 (428)
T 1vb3_A 1 MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAF 80 (428)
T ss_dssp CCEEETTEEEEEECHHHHHHHCSBGGGBCEEESSCCCCCHHHHHHHTTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 90274798589969999987377999951668647899999999885889999999999986578899999999999863
Q ss_pred HHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 30476678604772488254662138981206823888999999997317982079971665404679998616678559
Q gi|254780465|r 81 HCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINM 160 (469)
Q Consensus 81 ~~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v 160 (469)
+.| +|+++++++.|+||||||||+||||+|||+++++++++++ +++.+|+||||||||+||++||++.+++++
T Consensus 81 ~~~-----~~~~~~~~~~~~lELfhGPT~sFKD~a~~~l~~~l~~~~~--~~~~~Il~ATSGDTGsAa~~a~~~~~~i~~ 153 (428)
T 1vb3_A 81 AFP-----APVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAG--DKPVTILTATSGDTGAAVAHAFYGLPNVKV 153 (428)
T ss_dssp CSC-----CCEEEEETTEEEEECCCSTTSBTHHHHHHHHHHHHHHHTT--TCCEEEEEECSSSHHHHHHHHTTTCTTEEE
T ss_pred CCC-----CCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHCCCCCCEE
T ss_conf 888-----8753413885689973489854241689999999754411--465089982899719999999737899629
Q ss_pred EEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHH
Q ss_conf 99735776760332131134478708997179658889999997501543135831134556544401105589999987
Q gi|254780465|r 161 YILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIA 240 (469)
Q Consensus 161 ~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~ 240 (469)
+||||+|+||++||+||||. ++|||+++|+|+|||||++||++|.|.++++++.|+|+|||||+||+||++||||+|+|
T Consensus 154 vvl~P~g~vS~~Q~~Qmtt~-~~nv~~i~V~G~fDDcq~lvk~~~~d~~~~~~~~l~s~NSiN~~Ril~Q~vyyf~a~~q 232 (428)
T 1vb3_A 154 VILYPRGKISPLQEKLFCTL-GGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQ 232 (428)
T ss_dssp EEEEETTCSCHHHHHHHHSC-CTTEEEEEEESCHHHHHHHHHHGGGCHHHHHHHTEECCSTTSHHHHHHTTHHHHHHHTT
T ss_pred EEECCCCCCCHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHCHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99778877626777640014-58778981689978999999998515444213343043545404555458889999998
Q ss_pred HCCC-CCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 4477-887389963465788788667775089877058723676335677532220102345565642001340137889
Q gi|254780465|r 241 LGSP-NRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFERL 319 (469)
Q Consensus 241 ~~~~-~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERl 319 (469)
+... ..+++|+||||||||++|||+||+|||||+++|||||+||+|+||+++|+|+++++.+|+||||||++||||||+
T Consensus 233 l~~~~~~~~~~~VPtGNfGni~Ag~~Ak~mGlPi~~~i~AtN~N~il~~~~~tG~y~~~~~~~T~SpaMDI~~psNfeRl 312 (428)
T 1vb3_A 233 LPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRV 312 (428)
T ss_dssp SCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCCHHHHHHHHSCCCCCCCCCCSSGGGCCSSCTTHHHH
T ss_pred HCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHH
T ss_conf 43467774587457540878899999986799822699964898007899974970235567867759886487688999
Q ss_pred HHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH
Q ss_conf 99870970899999987520265105520221100012134213889999999999986395983833999999999874
Q gi|254780465|r 320 LFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACRK 399 (469)
Q Consensus 320 lf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~~ 399 (469)
++.+ ++.|.++.. +.+.+++|+++.+ |++.|+++||++|||||||+.|++++ .
T Consensus 313 ~~l~--------~~~~~~l~~-----------------~~~~~~~de~~~~-i~~~~~~~gy~~DPHTAvg~~a~~~~-~ 365 (428)
T 1vb3_A 313 EELF--------RRKIWQLKE-----------------LGYAAVDDETTQQ-TMRELKELGYTSEPHAAVAYRALRDQ-L 365 (428)
T ss_dssp HHHH--------HHTTCCGGG-----------------SEEEECCHHHHHH-HHHHHHHTTCCCCHHHHHHHHHHHTT-C
T ss_pred HHHH--------HHHHHHHHC-----------------CCCEECCCHHHHH-HHHHHHHCCCEECCCHHHHHHHHHHH-H
T ss_conf 9999--------988888750-----------------6632037077999-99999984983188689999999996-3
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
Q ss_conf 79983999971884349888999808798889889887417211010689999999999961
Q gi|254780465|r 400 SSSTPMVTLATAHPSKFPDTVKAASGIVPDCPISLEQMMRRPENCKVMNKNIDEIKKFIKKR 461 (469)
Q Consensus 400 ~~~~p~VvLATAHPaKFpe~V~~Aig~~~~~P~~L~~l~~k~e~~~~l~nd~~~ik~fI~~k 461 (469)
+++.|+|+||||||+|||++|++|+|..+++|++|++++++++++..+++|+++||+||.+|
T Consensus 366 ~~~~~~VvLaTAHPaKF~d~V~~aig~~~~~P~~l~~l~~~~~~~~~i~~d~~~vk~~il~h 427 (428)
T 1vb3_A 366 NPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNH 427 (428)
T ss_dssp CTTCEEEEEECBCGGGGHHHHHHHHTSCCCCCHHHHHHHSSCCCCEEEESCHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCHHCCCCCCCHHHHHHHHHHC
T ss_conf 79996899978671007999999858898996899877577400131878899999999856