HHsearch results for GI: 254780465 and protein with PDBid: 2d1f_A
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=7.6e-26 Score=198.07 Aligned_cols=299 Identities=25% Similarity=0.310 Sum_probs=216.3
Q ss_pred CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEE
Q ss_conf 6047724-------882546621389812068238889999999973179820799716654046799986166785599
Q gi|254780465|r 89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMY 161 (469)
Q Consensus 89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~ 161 (469)
+||.+++ -+.|+=-=++.||+||||+++..+ +....+.. ...++++|||++|.|++.... +.+....
T Consensus 39 TPLv~~~~L~~~~g~~i~~K~E~~nptGSfKdR~a~~~---i~~~~~~~--~~~vv~~ssGn~~~a~Aa~a~-~~g~~~~ 112 (360)
T 2d1f_A 39 TPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMA---VTDALAHG--QRAVLCASTGNTSASAAAYAA-RAGITCA 112 (360)
T ss_dssp CCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHH---HHHHHHTT--CSEEEECCSSHHHHHHHHHHH-HHTCEEE
T ss_pred CCEEEHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH---HHHHHHCC--CCEEEEECCCHHHHHHHHHHH-HHCCCCE
T ss_conf 81678267689879989998636797668799999999---99998659--987999677889999999999-8289864
Q ss_pred EECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
Q ss_conf 97357767603321311344787089971796588899999975015431358311345565444011055899999874
Q gi|254780465|r 162 ILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIAL 241 (469)
Q Consensus 162 vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~ 241 (469)
+++|.+.++..+..+|... +..++.++|+||||+..+++...+.. .....++.|+.++.+|..++++.+-|+
T Consensus 113 ~v~~~~~~~~~~~~~~~~~---GA~Vv~~~g~~~~a~~~a~~~~~~~~-----~~~~~~~~n~~~~~g~~t~a~Ei~~ql 184 (360)
T 2d1f_A 113 VLIPQGKIAMGKLAQAVMH---GAKIIQIDGNFDDCLELARKMAADFP-----TISLVNSVNPVRIEGQKTAAFEIVDVL 184 (360)
T ss_dssp EEECSSCCCHHHHHHHHHT---TCEEEEBSSCHHHHHHHHHHHHHHCT-----TEEECSTTCHHHHHHHTHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHC---CCEEEEECCCHHHHHHHHHHHHHHHC-----CCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9840542148889899967---99899989938999999998654421-----434456788067887899999999973
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHH----HHCCC--CCCEEEEE--CCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCH
Q ss_conf 4778873899634657887886677----75089--87705872--3676335677532220102345565642001340
Q gi|254780465|r 242 GSPNRNISFSVPTGNFGDIFAGYMA----KMMGL--PIEKLIIA--TNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIP 313 (469)
Q Consensus 242 ~~~~~~i~f~VPtGNfGni~Ag~~A----k~MGL--PI~kli~A--tN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~ 313 (469)
.. .+..+++|.|+.|++.+++.. ..+|+ +.-+++.. .+.+. +.+ ..+.+...|++.++.+..+
T Consensus 185 ~~--~~~~~~~~~g~Gg~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~------~~~~~~~~t~a~~~~~~~~ 255 (360)
T 2d1f_A 185 GT--APDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAP-LVL------GEPVSHPETIATAIRIGSP 255 (360)
T ss_dssp SS--CCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCH-HHH------SSCCSSCCCSCGGGCCSSC
T ss_pred CC--CCCEEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC-CCC------CCCCCCCCEEEECCCCCCC
T ss_conf 99--98489965788542788888875521142434565213434345664-334------5667788632200034688
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHH
Q ss_conf 13788999870970899999987520265105520221100012134213889999999999986395983833999999
Q gi|254780465|r 314 SNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHA 393 (469)
Q Consensus 314 SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~a 393 (469)
+++...+.... +..-....|+|+|+.++++.++++.|++++|++|+++.+
T Consensus 256 ~~~~~~~~~~~------------------------------~~~d~~v~V~d~e~~~a~~~l~~~egi~~~pssa~~~aa 305 (360)
T 2d1f_A 256 ASWTSAVEAQQ------------------------------QSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAG 305 (360)
T ss_dssp TTHHHHHHHHH------------------------------HHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHH
T ss_pred CCCCHHHHHHH------------------------------CCCCEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHH
T ss_conf 66612476541------------------------------247758976879999999999998492786888999999
Q ss_pred HHHHHHC----CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCC
Q ss_conf 9998747----9983999971884349888999808798889889887417
Q gi|254780465|r 394 ALACRKS----SSTPMVTLATAHPSKFPDTVKAASGIVPDCPISLEQMMRR 440 (469)
Q Consensus 394 a~~~~~~----~~~p~VvLATAHPaKFpe~V~~Aig~~~~~P~~L~~l~~k 440 (469)
+.++... .+..+|++.|.|+.||+|++.+.+....++|..+..+.++
T Consensus 306 l~~~~~~~~~~~~~~Vv~v~tg~G~k~~~~~~~~~~~~~~~p~~~~~~~~~ 356 (360)
T 2d1f_A 306 LLKAIDDGWVARGSTVVCTVTGNGLKDPDTALKDMPSVSPVPVDPVAVVEK 356 (360)
T ss_dssp HHHHHHHTSSCTTCEEEEEECBBGGGCHHHHHSSCCCCCCBCSCHHHHHHT
T ss_pred HHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 999998389998496999917898669999997578767899999999986