HHsearch results for GI: 254780465 and protein with PDBid: 2o2e_A

>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.69  E-value=3.2e-15  Score=124.39  Aligned_cols=348  Identities=14%  Similarity=0.066  Sum_probs=192.6

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCC-------
Q ss_conf             7878632861078889889987709998999999998751578998999999999863047667860477248-------
Q gi|254780465|r   24 ATDGGLYIPKYIPRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQLNA-------   96 (469)
Q Consensus        24 a~DGGL~vP~~~p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~~-------   96 (469)
                      .+-||.|+||.+...    |        .|+.....+. +    ...+..+..++-+..|-++ ++||.++.+       
T Consensus        35 ~~~gg~~~p~~l~~~----~--------~~~~~~~~~~-~----~~~~f~~e~~~~~~~y~gr-PTPL~~a~rLs~~lg~   96 (422)
T 2o2e_A           35 SGWGGRYVPEALMAV----I--------EEVTAAYQKE-R----VSQDFLDDLDRLQANYAGR-PSPLYEATRLSQHAGS   96 (422)
T ss_dssp             ------CCCGGGHHH----H--------HHHHHHHHHH-H----TSTHHHHHHHHHTTTTSSC-SCCEEECGGGGGGTTT
T ss_pred             CCCCCCCCCHHHHHH----H--------HHHHHHHHHH-H----CCHHHHHHHHHHHHHCCCC-CCHHEEHHHHHHHCCC
T ss_conf             446771587889999----9--------9999999998-6----5988999999998744899-8754391776875198


Q ss_pred             -CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC--CHHH
Q ss_conf             -8254662138981206823888999999997317982079971665404679998616678559997357767--6033
Q gi|254780465|r   97 -NEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI--SVVQ  173 (469)
Q Consensus        97 -~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v--S~~Q  173 (469)
                       +.|+=-=..-||+||||.++-.+..    ..++.++..+|..+++|.+|+|++.+.+ .-++++.|+.|....  +..-
T Consensus        97 a~IylK~E~lnptGS~K~r~a~~~~~----~ak~~G~~~~v~et~aGn~G~a~A~aaa-~~Gl~~~I~m~~~~~~~~~~~  171 (422)
T 2o2e_A           97 ARIFLKREDLNHTGSHKINNVLGQAL----LARRMGKTRVIAETGAGQHGVATATACA-LLGLDCVIYMGGIDTARQALN  171 (422)
T ss_dssp             CEEEEECGGGCCSSTTHHHHHHHHHH----HHHHTTCCEEEEEESSSHHHHHHHHHHH-HHTCEEEEEEEHHHHHHSHHH
T ss_pred             CEEEEEECCCCCCCCCHHHHHHHHHH----HHHHCCCCCEEECCCCCHHHHHHHHHHH-HCCCCEEEEECCCCHHHHHHH
T ss_conf             47999703686889853779999999----9997699855522254079999999999-869977992067663342899


Q ss_pred             HCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHC---CCCCCCCCC-CC--HHHCCCCHHHHHHHHHHHCC--CC
Q ss_conf             213113447870899717965888999999750154313---583113455-65--44401105589999987447--78
Q gi|254780465|r  174 QKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCH---SVNLSGINS-IN--WARIMAQIVYYFVSSIALGS--PN  245 (469)
Q Consensus       174 ~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~---~~~l~s~NS-IN--~~Ril~Q~vyYf~a~~~~~~--~~  245 (469)
                      ..+|-.. |-.  ++.|+++.+.....+.+++.+..-..   .+.+.|+.. ..  +--...|.+-...+..|+..  ..
T Consensus       172 v~~m~~~-GAe--Vi~v~~g~~~l~dAi~eA~~~~~~~~~~~~y~~gs~~~p~~~p~~v~~~q~~ig~E~~~Q~~~~~~~  248 (422)
T 2o2e_A          172 VARMRLL-GAE--VVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRIIGMEARVQIQGQAGR  248 (422)
T ss_dssp             HHHHHHT-TCE--EEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHC-CCE--EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999966-998--9996798875899999999999967343013213203786565344106799999999999986188


Q ss_pred             CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCC-----CHHHHHHHCCCH---H--------CCCCCCCCCCCCC
Q ss_conf             87389963465788788667775089877058723676-----335677532220---1--------0234556564200
Q gi|254780465|r  246 RNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNEN-----DTLVRMFDMGMY---R--------PEIVMETTSPAMD  309 (469)
Q Consensus       246 ~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~N-----diL~rf~~tG~y---~--------~~~~~~T~SpsMD  309 (469)
                      .+..+++|.|+-||+.+.|.+.+- .|=-++|...-.-     +.....+..|..   .        ...-..+...+.-
T Consensus       249 ~pd~vva~vGgGs~~~G~~~~f~~-~~~v~ligVEp~g~~~~~~~~~~~~~~g~~g~~~g~~~~~~~~~~g~~~~~~si~  327 (422)
T 2o2e_A          249 LPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHGSFSYLLQDEDGQTIESHSIS  327 (422)
T ss_dssp             CCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC------------------------------------------
T ss_pred             CCCEEEECCCCHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCEEEC
T ss_conf             783887578755779999998622-8995399993277754542455465359952012620221012357766633530


Q ss_pred             CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHH
Q ss_conf             1340137889998709708999999875202651055202211000-121342138899999999999863959838339
Q gi|254780465|r  310 IQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMS-LSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTA  388 (469)
Q Consensus       310 I~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~-~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTA  388 (469)
                      ++..              ..               .+........+ .......|+|+|+.++++.+.+..|++..|-+|
T Consensus       328 ~Gl~--------------~~---------------~~~~~~~~l~~~g~~~~v~VsD~Ea~~a~~~La~~EGIi~~p~sa  378 (422)
T 2o2e_A          328 AGLD--------------YP---------------GVGPEHAWLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIESA  378 (422)
T ss_dssp             ------------------------------------------------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred             CCCC--------------CC---------------CCCHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCEECCHHH
T ss_conf             4767--------------77---------------742577888745843999989999999999999976997753889


Q ss_pred             HHHHHHHHHH--HCCCCCEEEEECCCCCCCHHHHHHHHCCC
Q ss_conf             9999999987--47998399997188434988899980879
Q gi|254780465|r  389 VGIHAALACR--KSSSTPMVTLATAHPSKFPDTVKAASGIV  427 (469)
Q Consensus       389 vG~~aa~~~~--~~~~~p~VvLATAHPaKFpe~V~~Aig~~  427 (469)
                      .+++++.+..  ...+..+|++-|.|-.|-.+++.+.+|..
T Consensus       379 ~AlA~aikla~~l~~~~~IVv~lsG~G~kD~~~~~~~~g~~  419 (422)
T 2o2e_A          379 HAVAGALKLGVELGRGAVIVVNLSGRGDKDVETAAKWFGLL  419 (422)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEECCSCSSSHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCC
T ss_conf             99999999607618879799996888742799999985754