HHsearch results for GI: 254780465 and protein with PDBid: 2q3b_A

>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A*
Probab=99.50  E-value=8.9e-12  Score=100.52  Aligned_cols=275  Identities=16%  Similarity=0.132  Sum_probs=159.4

Q ss_pred             CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf             6047724-------88254662138981206823888999999997317--98207997166540467999861667855
Q gi|254780465|r   89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEER--DHYITIVGATSGDTGAAAIKAFAGKKRIN  159 (469)
Q Consensus        89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~--~~~~~il~ATSGDTGsAa~~a~~~~~~i~  159 (469)
                      +||.++.       .+.|+=-=+.-||+||||.++-   .++.+..+..  .+...|++||||.+|.|.+.+.+ .-+++
T Consensus        17 TPL~~~~~l~~~~g~~iy~K~E~~~ptGSfK~Rga~---~~l~~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~-~~G~~   92 (313)
T 2q3b_A           17 TPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGV---AMLQAAEQAGLIKPDTIILEPTSGNTGIALAMVCA-ARGYR   92 (313)
T ss_dssp             CCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHH---HHHHHHHHTTCCCTTCEEEEECSSHHHHHHHHHHH-HHTCE
T ss_pred             CCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHH---HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH-HCCCC
T ss_conf             943887544403298899996789977897899999---99999997599667977998178558899999999-81998


Q ss_pred             EEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCC-CCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf             99973577676033213113447870899717965888999999750154313583-11345565444011055899999
Q gi|254780465|r  160 MYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVN-LSGINSINWARIMAQIVYYFVSS  238 (469)
Q Consensus       160 v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~-l~s~NSIN~~Ril~Q~vyYf~a~  238 (469)
                      +.|+-|.. +++.-..||... |..  ++.+.+..++.+...+..-.......... ....|..|+  +..|........
T Consensus        93 ~~iv~p~~-~~~~k~~~~~~~-Ga~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~t~a~Ei~  166 (313)
T 2q3b_A           93 CVLTMPET-MSLERRMLLRAY-GAE--LILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANP--AIHRVTTAEEVW  166 (313)
T ss_dssp             EEEEEETT-SCHHHHHHHHHT-TCE--EEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHH--HHHHHTHHHHHH
T ss_pred             CEEECCCC-CCHHHHHHHHHC-CCC--CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH--HHHHHHHHHHHH
T ss_conf             44523665-889999999841-155--422223455167899998741001364125688871469--998877999999


Q ss_pred             HHHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             8744778873899634657887886677-750898770587236763356775322201023455656420013401378
Q gi|254780465|r  239 IALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFE  317 (469)
Q Consensus       239 ~~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfE  317 (469)
                      -|+.  +++-.+++|.|+-|.+.+-+.+ |.++ |--|++...-++-.   ++..+...+.. .++++...   ++.+  
T Consensus       167 ~q~~--~~~D~iv~~vG~Gg~~~Gi~~~lk~~~-~~~~iigVep~~s~---~~~~~~~~~~~-v~gi~~~~---~~~~--  234 (313)
T 2q3b_A          167 RDTD--GKVDIVVAGVGTGGTITGVAQVIKERK-PSARFVAVEPAASP---VLSGGQKGPHP-IQGIGAGF---VPPV--  234 (313)
T ss_dssp             HHTT--TCCCEEEEECSSSHHHHHHHHHHHHHC-TTCEEEEEEETTSC---TTTTCCCCCCC-CTTSCCSS---CCTT--
T ss_pred             HHCC--CCCCEEEECCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCCC---HHCCCCCCCCC-CCCCCCCC---CCHH--
T ss_conf             8559--999989978887187999999999729-99889998789872---11067748940-44257887---6433--


Q ss_pred             HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH
Q ss_conf             89998709708999999875202651055202211000121342138899999999999863959838339999999998
Q gi|254780465|r  318 RLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALAC  397 (469)
Q Consensus       318 Rllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~  397 (469)
                                                  +    ....-+  ....++|+|..+.++.+.++.|.++.|.++.++.++.++
T Consensus       235 ----------------------------~----~~~~vd--~~~~v~d~e~~~~~~~l~~~eGi~~~~ssga~~~aal~~  280 (313)
T 2q3b_A          235 ----------------------------L----DQDLVD--EIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQV  280 (313)
T ss_dssp             ----------------------------C----CGGGCC--EEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHH
T ss_pred             ----------------------------H----CHHHCC--EEEECCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHH
T ss_conf             ----------------------------3----323362--788689899999999999975909935299999999999


Q ss_pred             HH---CCCCCEEEEECCCCCCCHHH
Q ss_conf             74---79983999971884349888
Q gi|254780465|r  398 RK---SSSTPMVTLATAHPSKFPDT  419 (469)
Q Consensus       398 ~~---~~~~p~VvLATAHPaKFpe~  419 (469)
                      ..   ..+..+|++-|-+..|.-++
T Consensus       281 ~~~~~~~~~~VV~il~d~G~kY~~t  305 (313)
T 2q3b_A          281 ARRPENAGKLIVVVLPDFGERYLST  305 (313)
T ss_dssp             HTCGGGTTCEEEEEECBBSGGGC--
T ss_pred             HHHCCCCCCEEEEEECCCCHHHCCH
T ss_conf             6044489796999977997021585