Query gi|254780465|ref|YP_003064878.1| threonine synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 469
No_of_seqs 191 out of 1646
Neff 5.9
Searched_HMMs 23785
Date Mon May 30 12:03:49 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780465.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kl7_A Threonine synthase; thr 100.0 0 0 1283.0 39.5 467 1-467 6-514 (514)
2 1vb3_A Threonine synthase; PLP 100.0 0 0 1079.9 34.6 426 1-461 1-427 (428)
3 1e5x_A Threonine synthase; thr 100.0 1.4E-45 0 335.4 24.4 329 88-464 130-481 (486)
4 3aey_A Threonine synthase; PLP 100.0 9.5E-29 4E-33 218.2 17.2 298 89-438 29-345 (351)
5 2zsj_A Threonine synthase; PLP 100.0 3.1E-28 1.3E-32 214.6 17.4 296 89-438 31-347 (352)
6 2d1f_A Threonine synthase; ami 100.0 7.6E-26 3.2E-30 198.1 23.5 299 89-440 39-356 (360)
7 1p5j_A L-serine dehydratase; l 99.9 4.7E-19 2E-23 151.0 21.1 260 88-396 46-315 (372)
8 3iau_A Threonine deaminase; py 99.8 6.2E-19 2.6E-23 150.1 19.9 290 70-411 44-345 (366)
9 2rkb_A Serine dehydratase-like 99.8 1.6E-17 6.7E-22 140.4 25.3 289 88-425 7-317 (318)
10 1ve5_A Threonine deaminase; ri 99.8 1.1E-18 4.8E-23 148.3 18.9 272 88-410 20-303 (311)
11 1tdj_A Biosynthetic threonine 99.8 1E-17 4.3E-22 141.7 20.8 304 69-424 14-332 (514)
12 2gn0_A Threonine dehydratase c 99.8 1.9E-17 8.1E-22 139.8 21.3 279 96-425 55-338 (342)
13 1v71_A Serine racemase, hypoth 99.8 2.3E-17 9.5E-22 139.3 18.9 274 88-411 26-309 (323)
14 3l6b_A Serine racemase; pyrido 99.8 3.7E-16 1.6E-20 130.9 21.8 262 88-398 25-297 (346)
15 1o58_A O-acetylserine sulfhydr 99.8 7E-17 2.9E-21 135.9 15.9 286 71-420 9-303 (303)
16 2o2e_A Tryptophan synthase bet 99.7 3.2E-15 1.3E-19 124.4 17.4 348 24-427 35-419 (422)
17 1jbq_A Cystathionine beta-synt 99.7 3.1E-15 1.3E-19 124.5 17.1 281 89-416 109-403 (435)
18 2egu_A Cysteine synthase; O-ac 99.7 4.8E-15 2E-19 123.2 17.5 275 89-419 15-301 (308)
19 1v8z_A Tryptophan synthase bet 99.6 1.2E-13 5.2E-18 113.4 20.3 344 25-426 5-387 (388)
20 1x1q_A Tryptophan synthase bet 99.6 2.4E-13 1E-17 111.4 21.7 346 24-427 31-417 (418)
21 1qop_B Tryptophan synthase bet 99.6 3.3E-14 1.4E-18 117.4 16.2 352 19-429 3-395 (396)
22 1y7l_A O-acetylserine sulfhydr 99.6 2.1E-13 8.7E-18 111.8 19.6 279 89-418 14-307 (316)
23 2v03_A Cysteine synthase B; py 99.6 4.8E-13 2E-17 109.3 20.6 267 89-419 11-289 (303)
24 1ve1_A O-acetylserine sulfhydr 99.6 8.9E-13 3.8E-17 107.4 19.1 273 89-419 10-298 (304)
25 2pqm_A Cysteine synthase; OASS 99.5 1.8E-12 7.4E-17 105.4 18.2 275 89-419 24-316 (343)
26 1z7w_A Cysteine synthase; tran 99.5 9.8E-13 4.1E-17 107.1 16.5 275 89-418 16-304 (322)
27 3dwg_A Cysteine synthase B; su 99.5 5.3E-12 2.2E-16 102.1 20.1 267 88-419 15-305 (325)
28 1wkv_A Cysteine synthase; homo 99.5 5.9E-12 2.5E-16 101.8 20.0 321 41-425 11-383 (389)
29 1j0a_A 1-aminocyclopropane-1-c 99.5 6.6E-12 2.8E-16 101.4 19.2 275 87-411 20-309 (325)
30 2q3b_A Cysteine synthase A; py 99.5 8.9E-12 3.7E-16 100.5 19.7 275 89-419 17-305 (313)
31 1tzj_A ACC deaminase, 1-aminoc 99.4 6.3E-12 2.7E-16 101.5 14.9 283 87-411 14-323 (338)
32 1f2d_A 1-aminocyclopropane-1-c 99.3 6.9E-11 2.9E-15 94.4 15.5 279 87-411 14-324 (341)
33 3h7a_A Short chain dehydrogena 90.1 0.62 2.6E-05 25.3 5.8 73 128-204 4-78 (252)
34 3ksu_A 3-oxoacyl-acyl carrier 89.6 0.51 2.1E-05 25.9 5.0 76 130-207 10-88 (262)
35 3gk3_A Acetoacetyl-COA reducta 89.5 0.6 2.5E-05 25.4 5.3 74 130-206 23-99 (269)
36 1hdc_A 3-alpha, 20 beta-hydrox 89.2 0.65 2.7E-05 25.2 5.4 72 130-207 4-76 (254)
37 3kl4_A SRP54, signal recogniti 89.0 1.2 5.2E-05 23.3 11.0 204 53-273 47-268 (433)
38 2a4k_A 3-oxoacyl-[acyl carrier 88.9 1.2 5.2E-05 23.2 7.6 72 130-207 5-77 (263)
39 1ulu_A Enoyl-acyl carrier prot 88.6 1.1 4.7E-05 23.6 6.2 74 130-206 7-82 (261)
40 2hq1_A Glucose/ribitol dehydro 88.4 0.64 2.7E-05 25.2 4.9 73 130-206 4-79 (247)
41 3afn_B A1-R, 4-deoxy-L-erythro 88.3 0.63 2.6E-05 25.3 4.8 75 129-207 5-82 (258)
42 2uvd_A 3-oxoacyl-(acyl-carrier 88.1 0.46 1.9E-05 26.2 3.9 73 130-206 3-78 (246)
43 3is3_A 17BETA-hydroxysteroid d 87.7 0.6 2.5E-05 25.4 4.4 73 130-206 17-92 (270)
44 2pnf_A 3-oxoacyl-[acyl-carrier 87.7 0.31 1.3E-05 27.4 2.9 74 130-206 6-81 (248)
45 3ojf_A Enoyl-[acyl-carrier-pro 86.7 1.7 7E-05 22.3 6.6 76 130-206 5-82 (257)
46 1w6u_A 2,4-dienoyl-COA reducta 85.4 1.2 5E-05 23.4 4.9 72 133-206 27-100 (302)
47 3ezl_A Acetoacetyl-COA reducta 85.2 1.8 7.4E-05 22.2 5.7 74 132-206 13-87 (256)
48 1ae1_A Tropinone reductase-I; 85.2 1.3 5.5E-05 23.1 5.0 73 130-206 20-94 (273)
49 1sny_A Sniffer CG10964-PA; alp 84.7 1.4 5.8E-05 22.9 5.0 71 132-206 22-96 (267)
50 1h5q_A NADP-dependent mannitol 84.7 2 8.6E-05 21.7 5.8 75 130-207 13-89 (265)
51 3dii_A Short-chain dehydrogena 84.3 2.1 8.8E-05 21.7 5.8 70 131-207 2-72 (247)
52 3ijr_A Oxidoreductase, short c 84.2 2 8.5E-05 21.8 5.6 76 130-207 46-122 (291)
53 3op4_A 3-oxoacyl-[acyl-carrier 83.2 0.64 2.7E-05 25.2 2.7 73 129-207 7-80 (248)
54 2ph3_A 3-oxoacyl-[acyl carrier 82.5 1.4 6.1E-05 22.8 4.3 71 133-206 3-76 (245)
55 3a28_C L-2.3-butanediol dehydr 82.5 1.8 7.6E-05 22.1 4.8 74 133-207 3-78 (258)
56 2ae2_A Protein (tropinone redu 82.1 1.5 6.5E-05 22.6 4.3 73 130-206 8-82 (260)
57 1yb1_A 17-beta-hydroxysteroid 81.9 1.6 6.7E-05 22.5 4.3 73 131-207 31-105 (272)
58 3kvo_A Hydroxysteroid dehydrog 81.8 2.7 0.00011 20.9 6.5 76 130-207 44-126 (346)
59 1k2w_A Sorbitol dehydrogenase; 81.7 2.7 0.00011 20.9 5.9 70 132-206 5-75 (256)
60 2cfc_A 2-(R)-hydroxypropyl-COM 81.7 2.2 9.1E-05 21.6 5.0 72 133-206 3-76 (250)
61 2nm0_A Probable 3-oxacyl-(acyl 81.1 2.8 0.00012 20.8 6.7 149 130-308 20-191 (253)
62 2b4q_A Rhamnolipids biosynthes 81.0 1.8 7.7E-05 22.1 4.4 73 129-206 27-101 (276)
63 2o23_A HADH2 protein; HSD17B10 80.8 2.9 0.00012 20.7 7.2 78 125-207 5-83 (265)
64 1geg_A Acetoin reductase; SDR 80.6 2.5 0.00011 21.1 5.0 72 133-207 3-76 (256)
65 3gdg_A Probable NADP-dependent 80.6 1.7 7.1E-05 22.3 4.1 81 123-206 13-97 (267)
66 3osu_A 3-oxoacyl-[acyl-carrier 80.4 2.5 0.0001 21.1 4.9 72 133-207 5-79 (246)
67 1gee_A Glucose 1-dehydrogenase 80.3 2.2 9.3E-05 21.5 4.6 74 130-207 6-82 (261)
68 1g0o_A Trihydroxynaphthalene r 80.3 2.5 0.0001 21.2 4.9 74 130-207 28-104 (283)
69 3o38_A Short chain dehydrogena 80.1 2.8 0.00012 20.8 5.1 74 132-207 22-98 (266)
70 2c07_A 3-oxoacyl-(acyl-carrier 79.9 3.1 0.00013 20.5 5.7 73 130-206 43-117 (285)
71 1x1t_A D(-)-3-hydroxybutyrate 79.7 1.5 6.3E-05 22.7 3.6 73 133-207 5-80 (260)
72 2dtx_A Glucose 1-dehydrogenase 78.8 3.3 0.00014 20.3 7.0 64 130-207 7-71 (264)
73 3edm_A Short chain dehydrogena 78.2 3.5 0.00015 20.2 6.1 73 130-206 7-82 (259)
74 1php_A 3-phosphoglycerate kina 78.2 2.8 0.00012 20.8 4.6 51 107-163 63-114 (394)
75 3imf_A Short chain dehydrogena 77.2 3.7 0.00016 20.0 5.1 74 131-207 5-80 (257)
76 1vl8_A Gluconate 5-dehydrogena 76.3 3.8 0.00016 19.9 4.8 74 130-206 20-95 (267)
77 2rhc_B Actinorhodin polyketide 76.1 3.9 0.00017 19.8 5.2 74 130-206 20-95 (277)
78 1zem_A Xylitol dehydrogenase; 76.0 4 0.00017 19.7 5.2 73 132-207 7-81 (262)
79 1xhl_A Short-chain dehydrogena 75.7 1.9 7.9E-05 22.0 3.2 75 129-206 24-102 (297)
80 2ehd_A Oxidoreductase, oxidore 75.5 3.6 0.00015 20.1 4.5 69 131-206 5-74 (234)
81 2zvi_A 2,3-diketo-5-methylthio 75.5 1.9 8.1E-05 21.9 3.2 24 248-273 250-275 (425)
82 1v6s_A Phosphoglycerate kinase 75.0 4 0.00017 19.7 4.7 44 114-163 68-111 (390)
83 1edo_A Beta-keto acyl carrier 73.9 3.5 0.00015 20.1 4.2 72 133-207 2-76 (244)
84 3lyl_A 3-oxoacyl-(acyl-carrier 73.9 4.5 0.00019 19.4 4.8 74 131-207 4-79 (247)
85 1uls_A Putative 3-oxoacyl-acyl 73.9 4.5 0.00019 19.4 5.4 70 130-207 4-74 (245)
86 3grp_A 3-oxoacyl-(acyl carrier 73.9 4.5 0.00019 19.4 5.6 71 130-207 26-98 (266)
87 2rfv_A Methionine gamma-lyase; 73.8 3.6 0.00015 20.1 4.2 13 326-338 270-282 (398)
88 1iy8_A Levodione reductase; ox 73.3 4.6 0.00019 19.3 5.1 74 131-206 12-88 (267)
89 3cxt_A Dehydrogenase with diff 72.9 4.7 0.0002 19.2 5.0 74 130-207 33-108 (291)
90 2j6p_A SB(V)-AS(V) reductase; 72.8 4.7 0.0002 19.2 5.1 101 66-175 6-116 (152)
91 3icc_A Putative 3-oxoacyl-(acy 72.8 4.7 0.0002 19.2 5.1 71 133-206 8-81 (255)
92 1fmc_A 7 alpha-hydroxysteroid 72.7 4.7 0.0002 19.2 5.2 73 130-206 10-84 (255)
93 1nff_A Putative oxidoreductase 72.1 4.9 0.00021 19.1 5.9 71 132-207 7-78 (260)
94 1spx_A Short-chain reductase f 71.6 5 0.00021 19.1 4.5 73 132-206 6-82 (278)
95 3grk_A Enoyl-(acyl-carrier-pro 71.4 4.5 0.00019 19.3 4.3 75 130-207 30-106 (293)
96 1vpe_A Phosphoglycerate kinase 71.4 5.1 0.00021 19.0 4.9 42 246-291 209-250 (398)
97 3k31_A Enoyl-(acyl-carrier-pro 71.1 5.1 0.00022 19.0 5.8 75 130-207 29-105 (296)
98 1ja9_A 4HNR, 1,3,6,8-tetrahydr 71.0 5.2 0.00022 18.9 5.0 72 133-207 22-96 (274)
99 3ftp_A 3-oxoacyl-[acyl-carrier 70.9 5 0.00021 19.1 4.4 72 132-206 28-101 (270)
100 1hxh_A 3BETA/17BETA-hydroxyste 70.8 5.2 0.00022 18.9 5.4 71 132-207 6-77 (253)
101 2ew8_A (S)-1-phenylethanol deh 70.3 5.3 0.00022 18.8 6.3 73 131-207 6-79 (249)
102 2q2v_A Beta-D-hydroxybutyrate 70.3 5.3 0.00022 18.8 5.8 73 130-207 3-76 (255)
103 2wsb_A Galactitol dehydrogenas 70.2 5.4 0.00023 18.8 4.8 69 130-204 10-80 (254)
104 2zat_A Dehydrogenase/reductase 69.4 5.6 0.00023 18.7 4.7 74 131-207 13-88 (260)
105 3i4f_A 3-oxoacyl-[acyl-carrier 69.2 5.6 0.00024 18.7 4.7 76 129-207 5-82 (264)
106 1mk3_A BCL-W, apoptosis regula 68.8 4.9 0.00021 19.1 4.0 32 193-239 74-105 (178)
107 3gaf_A 7-alpha-hydroxysteroid 68.5 5.8 0.00024 18.6 4.4 74 129-206 10-85 (256)
108 2gdz_A NAD+-dependent 15-hydro 68.3 5.9 0.00025 18.6 5.2 95 130-230 6-108 (267)
109 2z1n_A Dehydrogenase; reductas 67.6 6.1 0.00025 18.5 5.3 73 130-204 6-80 (260)
110 2ims_A Apoptosis regulator BAK 67.1 4.5 0.00019 19.4 3.5 30 193-237 92-121 (171)
111 3gvc_A Oxidoreductase, probabl 67.1 6.2 0.00026 18.4 5.6 159 130-308 28-207 (277)
112 1vp8_A Hypothetical protein AF 67.0 4.7 0.0002 19.2 3.6 50 111-163 20-72 (201)
113 1xg5_A ARPG836; short chain de 66.8 3.9 0.00016 19.8 3.1 74 130-206 31-107 (279)
114 1bdb_A CIS-biphenyl-2,3-dihydr 66.2 6.4 0.00027 18.3 5.9 72 130-207 4-76 (277)
115 2jah_A Clavulanic acid dehydro 66.0 6.5 0.00027 18.3 5.2 73 132-207 7-81 (247)
116 3nep_X Malate dehydrogenase; h 66.0 1.8 7.4E-05 22.2 1.2 131 133-280 2-143 (314)
117 3ctm_A Carbonyl reductase; alc 65.8 6.5 0.00027 18.2 5.7 75 129-207 32-108 (279)
118 1g5m_A Protein (apoptosis regu 65.5 4.1 0.00017 19.6 3.0 31 194-239 86-116 (166)
119 3nkl_A UDP-D-quinovosamine 4-d 64.0 6.9 0.00029 18.1 4.0 62 130-204 3-64 (141)
120 2bgk_A Rhizome secoisolaricire 63.7 7.1 0.0003 18.0 6.1 72 131-207 15-89 (278)
121 1xkq_A Short-chain reductase f 63.6 7.2 0.0003 18.0 4.7 74 132-206 6-82 (280)
122 2j37_W Signal recognition part 63.4 7.2 0.0003 17.9 10.8 189 70-279 73-275 (504)
123 1yxm_A Pecra, peroxisomal tran 63.3 7.2 0.0003 17.9 5.9 73 132-206 18-96 (303)
124 1wma_A Carbonyl reductase [NAD 63.1 7.3 0.00031 17.9 4.4 75 130-207 2-79 (276)
125 1r2d_A Apoptosis regulator BCL 63.0 5 0.00021 19.0 3.1 32 193-239 119-150 (218)
126 1gc0_A Methionine gamma-lyase; 62.9 7.4 0.00031 17.9 5.1 12 327-338 272-283 (398)
127 3fdl_A Apoptosis regulator BCL 62.7 5.9 0.00025 18.5 3.4 30 194-238 69-98 (158)
128 2nwq_A Probable short-chain de 62.5 7.4 0.00031 17.9 3.9 72 131-207 21-94 (272)
129 1cs1_A CGS, protein (cystathio 62.2 7.6 0.00032 17.8 5.3 11 327-337 258-268 (386)
130 1k3k_A Functional anti-apoptot 61.4 5.5 0.00023 18.8 3.0 12 220-231 80-91 (158)
131 1n8p_A Cystathionine gamma-lya 60.8 8 0.00034 17.6 6.1 10 327-336 263-272 (393)
132 1jtv_A 17 beta-hydroxysteroid 60.5 8.1 0.00034 17.6 4.2 72 132-205 2-80 (327)
133 1j8m_F SRP54, signal recogniti 60.3 8.1 0.00034 17.6 13.1 192 69-274 69-270 (297)
134 3n74_A 3-ketoacyl-(acyl-carrie 59.7 8.3 0.00035 17.5 6.1 72 130-207 8-80 (261)
135 3nyw_A Putative oxidoreductase 59.3 8.5 0.00036 17.5 4.6 75 130-206 5-83 (250)
136 3ilc_A BCL-2-like protein 1; a 59.2 6.6 0.00028 18.2 3.1 33 192-239 119-151 (197)
137 2qne_A Putative methyltransfer 59.0 5.2 0.00022 18.9 2.6 191 237-466 275-493 (495)
138 1qyc_A Phenylcoumaran benzylic 58.5 8.7 0.00037 17.4 4.6 70 131-204 4-75 (308)
139 3nnp_A Xometc, cystathionine g 58.5 8.7 0.00037 17.4 5.2 26 1-26 4-32 (400)
140 2d69_A Ribulose bisphosphate c 58.3 3.6 0.00015 20.1 1.7 16 162-177 158-173 (430)
141 2w3l_A BCL2-XL, apoptosis regu 58.2 8.1 0.00034 17.6 3.5 30 194-238 65-94 (144)
142 1qsg_A Enoyl-[acyl-carrier-pro 57.5 9.1 0.00038 17.3 5.5 76 130-207 8-84 (265)
143 3lf2_A Short chain oxidoreduct 57.5 9.1 0.00038 17.3 4.9 75 131-207 7-84 (265)
144 1fw8_A PGK P72, phosphoglycera 57.4 9.1 0.00038 17.2 4.3 151 114-281 4-188 (416)
145 1zk4_A R-specific alcohol dehy 57.3 9.1 0.00038 17.2 5.4 71 132-206 6-78 (251)
146 2wm3_A NMRA-like family domain 57.0 9.2 0.00039 17.2 4.8 69 131-207 4-72 (299)
147 1ltk_A Phosphoglycerate kinase 57.0 9.2 0.00039 17.2 5.8 169 107-291 76-279 (425)
148 1zmr_A Phosphoglycerate kinase 56.9 9.2 0.00039 17.2 4.7 28 247-278 207-234 (387)
149 2vof_A BCL-2-related protein A 56.8 6.2 0.00026 18.4 2.7 24 197-232 76-99 (157)
150 2a5y_A Apoptosis regulator CED 55.3 7.3 0.00031 17.9 2.9 36 192-237 97-132 (204)
151 16pk_A PGK, 3-phosphoglycerate 55.2 9.9 0.00041 17.0 3.8 31 247-281 229-259 (415)
152 1e5e_A MGL, methionine gamma-l 54.9 10 0.00042 17.0 4.7 13 326-338 269-281 (404)
153 1f0k_A MURG, UDP-N-acetylgluco 54.7 10 0.00042 17.0 8.7 25 249-273 98-122 (364)
154 2oem_A 2,3-diketo-5-methylthio 54.4 10 0.00043 16.9 4.7 24 248-273 236-261 (413)
155 3dpi_A NAD+ synthetase; ssgcid 54.2 10 0.00043 16.9 6.2 156 100-267 15-182 (285)
156 1shu_X Anthrax toxin receptor 54.2 10 0.00043 16.9 6.6 48 155-206 132-179 (182)
157 2bd0_A Sepiapterin reductase; 54.1 10 0.00043 16.9 4.1 72 133-206 3-82 (244)
158 2ffh_A Protein (FFH); SRP54, s 53.9 10 0.00043 16.9 9.2 218 53-295 50-297 (425)
159 3ioy_A Short-chain dehydrogena 53.2 11 0.00044 16.8 5.0 75 130-207 7-84 (319)
160 1oaa_A Sepiapterin reductase; 53.2 11 0.00044 16.8 4.9 74 131-205 5-83 (259)
161 1ohu_A Apoptosis regulator CED 53.1 8.9 0.00037 17.3 3.0 37 193-239 78-114 (175)
162 1qgn_A Protein (cystathionine 52.8 11 0.00045 16.8 5.7 96 102-206 80-175 (445)
163 2cun_A Phosphoglycerate kinase 52.5 11 0.00046 16.7 4.1 46 112-163 65-110 (410)
164 1yde_A Retinal dehydrogenase/r 52.1 11 0.00046 16.7 5.9 70 131-207 9-79 (270)
165 2zqz_A L-LDH, L-lactate dehydr 51.7 7.9 0.00033 17.7 2.6 135 125-280 3-150 (326)
166 2qhx_A Pteridine reductase 1; 51.4 11 0.00047 16.6 4.6 77 129-207 43-139 (328)
167 3gem_A Short chain dehydrogena 50.5 10 0.00044 16.9 3.0 72 127-206 23-95 (260)
168 2ctz_A O-acetyl-L-homoserine s 49.7 12 0.0005 16.4 4.7 17 443-459 398-414 (421)
169 1hdo_A Biliverdin IX beta redu 49.6 12 0.0005 16.4 5.4 66 131-208 3-68 (206)
170 2wzb_A Phosphoglycerate kinase 49.1 12 0.00051 16.4 3.5 158 107-279 66-258 (416)
171 2axq_A Saccharopine dehydrogen 48.6 12 0.00052 16.3 3.2 55 130-192 22-76 (467)
172 2dt5_A AT-rich DNA-binding pro 48.3 13 0.00053 16.3 4.7 52 114-167 62-114 (211)
173 2qq5_A DHRS1, dehydrogenase/re 48.3 13 0.00053 16.3 3.7 73 132-207 5-79 (260)
174 1ldn_A L-lactate dehydrogenase 48.0 10 0.00042 16.9 2.6 135 128-280 3-148 (316)
175 3e03_A Short chain dehydrogena 47.9 13 0.00053 16.2 5.3 76 129-206 4-86 (274)
176 2pd4_A Enoyl-[acyl-carrier-pro 47.4 13 0.00054 16.2 6.5 75 130-207 5-81 (275)
177 2pd6_A Estradiol 17-beta-dehyd 47.1 13 0.00055 16.2 6.1 74 131-206 6-87 (264)
178 3ic5_A Putative saccharopine d 46.7 12 0.0005 16.4 2.8 63 130-203 4-66 (118)
179 3m1a_A Putative dehydrogenase; 45.9 14 0.00057 16.0 6.1 71 131-206 4-75 (281)
180 3d0o_A L-LDH 1, L-lactate dehy 45.7 12 0.00049 16.5 2.6 132 130-279 5-147 (317)
181 2bi7_A UDP-galactopyranose mut 44.7 14 0.0006 15.9 3.6 32 130-164 2-33 (384)
182 3p7m_A Malate dehydrogenase; p 44.7 8.6 0.00036 17.4 1.8 134 132-280 6-147 (321)
183 1xq1_A Putative tropinone redu 44.7 14 0.0006 15.9 4.5 73 130-206 13-87 (266)
184 2p91_A Enoyl-[acyl-carrier-pro 44.0 15 0.00061 15.8 5.2 74 130-206 20-95 (285)
185 1e7w_A Pteridine reductase; di 43.0 15 0.00063 15.7 4.6 76 130-207 7-102 (291)
186 1zl8_A LIN-7; heterodimer, alp 42.6 15 0.00064 15.7 3.7 44 327-378 8-51 (53)
187 1y6j_A L-lactate dehydrogenase 41.1 16 0.00067 15.5 2.9 130 131-281 7-149 (318)
188 3i1j_A Oxidoreductase, short c 40.9 16 0.00068 15.5 4.5 74 130-206 13-90 (247)
189 1f16_A Protein (apoptosis regu 40.3 16 0.00065 15.6 2.6 33 193-239 88-120 (192)
190 1t57_A Conserved protein MTH16 39.3 17 0.00072 15.4 3.7 54 111-167 28-84 (206)
191 1hyh_A L-hicdh, L-2-hydroxyiso 39.1 15 0.00063 15.8 2.3 131 132-279 2-146 (309)
192 2nl9_A Fusion protein consisti 38.6 15 0.00065 15.6 2.4 32 194-239 73-104 (157)
193 3dzc_A UDP-N-acetylglucosamine 38.3 18 0.00074 15.2 8.7 116 132-279 26-144 (396)
194 3cog_A Cystathionine gamma-lya 38.2 18 0.00074 15.2 6.1 22 5-26 8-31 (403)
195 1pzg_A LDH, lactate dehydrogen 37.0 18 0.00077 15.1 6.7 139 128-280 6-157 (331)
196 2d1y_A Hypothetical protein TT 36.8 19 0.00078 15.1 6.5 68 130-206 5-73 (256)
197 2v4i_B Glutamate N-acetyltrans 35.6 19 0.00081 15.0 3.2 44 186-232 86-131 (213)
198 3e70_C DPA, signal recognition 35.3 20 0.00082 14.9 6.2 158 96-274 127-299 (328)
199 3iuy_A Probable ATP-dependent 35.3 20 0.00082 14.9 2.9 63 131-193 57-130 (228)
200 1vra_B Arginine biosynthesis b 35.1 20 0.00083 14.9 3.5 43 187-232 94-138 (215)
201 1qpg_A PGK, 3-phosphoglycerate 34.9 17 0.0007 15.4 2.1 157 107-279 66-256 (415)
202 2i6t_A Ubiquitin-conjugating e 34.8 20 0.00084 14.9 2.5 33 131-165 14-46 (303)
203 2h7i_A Enoyl-[acyl-carrier-pro 34.8 20 0.00084 14.9 5.5 70 130-204 6-78 (269)
204 1sby_A Alcohol dehydrogenase; 34.7 20 0.00084 14.9 6.0 74 130-206 4-80 (254)
205 2v65_A LDH-A, L-lactate dehydr 34.5 9.7 0.00041 17.1 0.8 48 117-166 2-53 (331)
206 2wh6_A Early antigen protein R 33.6 21 0.00087 14.8 3.5 25 196-232 95-119 (173)
207 1gz6_A Estradiol 17 beta-dehyd 33.5 21 0.00088 14.7 5.3 75 132-207 9-89 (319)
208 2q5c_A NTRC family transcripti 33.5 21 0.00088 14.7 2.6 149 119-291 16-178 (196)
209 3oec_A Carveol dehydrogenase ( 33.4 21 0.00088 14.7 6.3 160 132-308 46-240 (317)
210 2knq_A General secretion pathw 33.0 20 0.00085 14.9 2.2 36 158-193 94-129 (142)
211 3oj0_A Glutr, glutamyl-tRNA re 32.7 21 0.0009 14.7 3.2 38 123-163 13-50 (144)
212 1qbj_A Protein (double-strande 32.5 8.2 0.00034 17.6 0.1 34 260-299 28-61 (81)
213 3bdm_F Proteasome component C1 32.3 22 0.00092 14.6 3.5 24 181-205 69-92 (287)
214 2v7p_A L-lactate dehydrogenase 32.0 22 0.00093 14.6 3.2 139 133-290 2-153 (310)
215 3d3w_A L-xylulose reductase; u 31.7 22 0.00094 14.5 4.4 68 130-204 6-74 (244)
216 3it4_B Arginine biosynthesis b 31.7 22 0.00094 14.5 2.7 43 187-232 88-132 (205)
217 1uzm_A 3-oxoacyl-[acyl-carrier 31.5 22 0.00094 14.5 6.5 63 131-207 15-78 (247)
218 3nrc_A Enoyl-[acyl-carrier-pro 31.3 23 0.00095 14.5 5.9 74 130-206 25-99 (280)
219 2gxq_A Heat resistant RNA depe 31.2 23 0.00096 14.5 5.0 39 131-169 38-84 (207)
220 2o1u_A Endoplasmin; GRP94, HSP 30.6 11 0.00047 16.6 0.6 91 249-344 298-393 (666)
221 1ii2_A Phosphoenolpyruvate car 30.5 16 0.00069 15.5 1.4 15 362-376 427-441 (524)
222 1ur5_A Malate dehydrogenase; o 30.3 23 0.00099 14.4 5.3 124 132-280 3-144 (309)
223 1qyd_A Pinoresinol-lariciresin 30.2 24 0.00099 14.4 5.2 65 135-202 7-72 (313)
224 3f9i_A 3-oxoacyl-[acyl-carrier 30.0 24 0.001 14.4 4.9 69 130-204 13-82 (249)
225 3lls_A 3-ketoacyl-(acyl-carrie 30.0 24 0.001 14.4 4.9 14 307-320 286-299 (475)
226 1ez4_A Lactate dehydrogenase; 29.6 24 0.001 14.3 2.3 124 130-279 4-145 (318)
227 1lld_A L-lactate dehydrogenase 28.8 25 0.001 14.2 2.9 34 130-165 6-39 (319)
228 1ofh_A ATP-dependent HSL prote 28.7 25 0.0011 14.2 2.5 21 103-123 54-74 (310)
229 2yxt_A Pyridoxal kinase; beta 28.6 25 0.0011 14.2 4.6 12 193-204 164-175 (312)
230 2z2v_A Hypothetical protein PH 28.5 25 0.0011 14.2 2.8 34 125-160 10-43 (365)
231 1y2y_A Ribosome biogenesis pro 28.5 11 0.00046 16.7 0.2 10 409-418 28-37 (58)
232 1oju_A MDH, malate dehydrogena 28.4 25 0.0011 14.2 2.3 126 133-280 2-143 (294)
233 3gx1_A LIN1832 protein; APC633 28.3 25 0.0011 14.2 4.0 45 131-175 2-50 (130)
234 1hv8_A Putative ATP-dependent 28.3 25 0.0011 14.2 3.0 60 134-193 47-111 (367)
235 3gr6_A Enoyl-[acyl-carrier-pro 28.1 26 0.0011 14.1 5.3 76 128-205 7-85 (260)
236 2i4i_A ATP-dependent RNA helic 28.0 26 0.0011 14.1 3.9 34 406-439 377-411 (417)
237 3ek2_A Enoyl-(acyl-carrier-pro 27.8 26 0.0011 14.1 5.2 74 130-206 13-88 (271)
238 3g7k_A 3-methylitaconate isome 27.6 23 0.00099 14.4 1.8 108 193-306 30-161 (391)
239 1ibj_A CBL, cystathionine beta 27.6 26 0.0011 14.1 5.8 14 136-152 151-164 (464)
240 3i6i_A Putative leucoanthocyan 27.5 26 0.0011 14.1 4.0 67 132-204 11-79 (346)
241 1qgp_A Protein (double strande 27.5 9.7 0.00041 17.1 -0.2 34 260-299 32-65 (77)
242 1cyd_A Carbonyl reductase; sho 27.5 26 0.0011 14.1 4.4 66 130-203 6-73 (244)
243 3e15_A Glucose-6-phosphate 1-d 26.8 23 0.00097 14.4 1.7 46 107-153 28-80 (312)
244 3lra_A Disks large homolog 1, 26.3 27 0.0012 13.9 2.0 72 287-378 175-246 (254)
245 2qe7_A ATP synthase subunit al 26.2 28 0.0012 13.9 5.6 26 288-313 347-372 (502)
246 2a2k_A M-phase inducer phospha 26.1 27 0.0011 14.0 1.9 98 67-175 26-143 (175)
247 3cj1_A Ectonucleoside triphosp 25.5 28 0.0012 13.8 4.5 27 182-208 290-316 (456)
248 2x9g_A PTR1, pteridine reducta 25.5 28 0.0012 13.8 3.4 73 131-205 22-101 (288)
249 2qy9_A Cell division protein F 25.3 29 0.0012 13.8 10.6 210 47-274 44-275 (309)
250 3fmp_B ATP-dependent RNA helic 25.1 29 0.0012 13.8 6.2 48 122-169 122-174 (479)
251 3guy_A Short-chain dehydrogena 24.6 29 0.0012 13.7 4.3 67 134-206 3-71 (230)
252 3o8q_A Shikimate 5-dehydrogena 24.5 29 0.0012 13.7 4.2 129 8-163 15-156 (281)
253 1vdm_A Purine phosphoribosyltr 23.9 30 0.0013 13.6 3.6 21 248-270 29-49 (153)
254 2et6_A (3R)-hydroxyacyl-COA de 23.8 30 0.0013 13.6 5.9 36 52-87 55-93 (604)
255 2weu_A Tryptophan 5-halogenase 23.8 30 0.0013 13.6 2.1 10 67-76 61-70 (511)
256 1fx0_B ATP synthase beta chain 23.8 30 0.0013 13.6 3.9 43 123-165 156-203 (498)
257 1iru_F 20S proteasome; cell cy 23.6 31 0.0013 13.6 5.0 56 182-241 67-122 (263)
258 2kua_A BCL-2-like protein 10; 23.5 17 0.00071 15.4 0.5 19 113-131 15-33 (170)
259 3fmc_A Putative succinylglutam 23.4 31 0.0013 13.6 2.9 43 129-171 31-79 (368)
260 1yqh_A DUF77, IG hypothetical 23.4 27 0.0011 14.0 1.5 16 190-205 50-65 (109)
261 2aus_D NOP10, ribosome biogene 22.9 17 0.0007 15.4 0.3 11 408-418 27-37 (60)
262 2ewd_A Lactate dehydrogenase,; 22.7 32 0.0013 13.5 2.7 132 131-279 4-145 (317)
263 2ck3_D ATP synthase beta chain 22.4 32 0.0014 13.4 5.3 22 288-309 342-363 (482)
264 2v6b_A L-LDH, L-lactate dehydr 22.3 33 0.0014 13.4 2.6 32 133-166 2-33 (304)
265 1a5z_A L-lactate dehydrogenase 22.2 33 0.0014 13.4 2.2 128 133-281 2-142 (319)
266 1xng_A NH(3)-dependent NAD(+) 22.1 33 0.0014 13.4 5.2 51 119-171 12-65 (268)
267 3h5n_A MCCB protein; ubiquitin 22.1 33 0.0014 13.4 3.7 96 65-180 61-166 (353)
268 1c25_A CDC25A; hydrolase, cell 22.0 33 0.0014 13.4 2.6 21 134-154 92-112 (161)
269 3kzv_A Uncharacterized oxidore 21.8 33 0.0014 13.3 4.4 72 131-207 2-75 (254)
270 2apo_B Ribosome biogenesis pro 21.7 18 0.00075 15.2 0.3 11 408-418 28-38 (60)
271 1vi2_A Shikimate 5-dehydrogena 21.7 33 0.0014 13.3 3.9 23 130-154 125-147 (300)
272 3dfi_A Pseudoaglycone deacetyl 21.6 33 0.0014 13.3 2.8 32 112-145 18-49 (270)
273 1stz_A Heat-inducible transcri 21.4 33 0.0014 13.4 1.6 43 146-188 121-163 (338)
274 1qvb_A Beta-glycosidase; TIM-b 21.3 19 0.00081 15.0 0.4 22 447-468 454-475 (481)
275 1guz_A Malate dehydrogenase; o 21.3 34 0.0014 13.3 2.6 132 133-281 2-144 (310)
276 2i6u_A Otcase, ornithine carba 21.0 31 0.0013 13.6 1.4 130 58-204 1-137 (307)
277 3gqb_B V-type ATP synthase bet 21.0 34 0.0014 13.2 4.7 22 288-309 342-363 (464)
278 2ibo_A Hypothetical protein SP 20.9 31 0.0013 13.6 1.3 17 190-206 45-61 (104)
279 1j3b_A ATP-dependent phosphoen 20.8 29 0.0012 13.7 1.2 16 67-82 78-93 (529)
280 2fwm_X 2,3-dihydro-2,3-dihydro 20.6 35 0.0015 13.2 7.0 65 130-207 6-71 (250)
281 6ldh_A M4 APO-lactate dehydrog 20.6 35 0.0015 13.2 3.4 125 130-279 20-162 (330)
282 1rii_A 2,3-bisphosphoglycerate 20.4 34 0.0014 13.3 1.5 27 245-275 175-201 (265)
283 1iru_I 20S proteasome; cell cy 20.3 19 0.00082 15.0 0.2 24 181-205 37-60 (234)
284 3gmb_A 2-methyl-3-hydroxypyrid 20.2 36 0.0015 13.1 3.1 31 130-163 46-76 (415)
285 3fiu_A NH(3)-dependent NAD(+) 20.1 36 0.0015 13.1 5.6 47 122-170 19-67 (249)
No 1
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, monomer, lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=0 Score=1282.96 Aligned_cols=467 Identities=43% Similarity=0.737 Sum_probs=445.5
Q ss_pred CCEECCCCCCC-CCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-HHHCCCCHHHHHHHHHHHHCC-CCCCHHHHHHHHH
Q ss_conf 93261789888-88889998615678786328610788898899-877099989999999987515-7899899999999
Q gi|254780465|r 1 MKYISTRNVDL-SLGFCDTILSGLATDGGLYIPKYIPRLSEKEI-KDLRGLSYQEIALFIFRLFIG-QEIKSSKLRDIVN 77 (469)
Q Consensus 1 M~y~STRg~~~-~~~f~~a~~~Gla~DGGL~vP~~~p~~~~~~~-~~~~~~sy~e~a~~il~~f~~-~~i~~~~l~~ii~ 77 (469)
|.|+||||+.+ .+||+||+++|||+|||||||++||+++.+++ ..|+++||.|+|++|+++|++ ++|++++|++||+
T Consensus 6 ~~Y~STR~~~~~~~sf~~a~l~Gla~DGGLyvP~~~P~~~~~~l~~~~~~lsy~ela~~il~~fi~~~~i~~~~L~~i~~ 85 (514)
T 1kl7_A 6 QVYRSTRSSSPKTISFEEAIIQGLATDGGLFIPPTIPQVDQATLFNDWSKLSFQDLAFAIMRLYIAQEEIPDADLKDLIK 85 (514)
T ss_dssp SCBEETTCCSSCCBCHHHHHHHCSCTTSCCEECSSCCCCCHHHHHHTTTTCCHHHHHHHHHHTTSCTTTSCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 37887969789976899999847688995364775798998999988757999999999999865954289999999999
Q ss_pred HHHHHCCCCCCCEEEEC----CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC--------CCCCEEEEECCCCCHH
Q ss_conf 98630476678604772----48825466213898120682388899999999731--------7982079971665404
Q gi|254780465|r 78 RSYHCFRNAAVTPLIQL----NANEFLLELFHGPTLSFKDIAMQFIAELMDHILEE--------RDHYITIVGATSGDTG 145 (469)
Q Consensus 78 ~ay~~f~~~~~~pl~~l----~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~--------~~~~~~il~ATSGDTG 145 (469)
+||+.|++++++||+++ ++++|+||||||||+||||+|||++|+|++|+|++ ++++++||||||||||
T Consensus 86 ~ay~~F~~~~v~pl~~l~~~~~~~~~vlELfHGPT~aFKD~a~q~~~~l~~~~l~~~~~~~~~~~~~~~~il~ATSGDTG 165 (514)
T 1kl7_A 86 RSYSTFRSDEVTPLVQNVTGDKENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGATSGDTG 165 (514)
T ss_dssp HHTTTCSSTTSSCEECCTTCSSSCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEEECSSSHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCH
T ss_conf 99725998766775333557778648998304898772455788899999999986144323456753799982887519
Q ss_pred HHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHH
Q ss_conf 67999861667855999735776760332131134478708997179658889999997501543135831134556544
Q gi|254780465|r 146 AAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWA 225 (469)
Q Consensus 146 sAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~ 225 (469)
+||++||++++|++++||||+|+||++||+||||+.++|||+++|+|+|||||++||++|+|++|++++.|+|+|||||+
T Consensus 166 ~Aa~~af~~~~~i~v~vlyP~g~vS~iQ~~Qmtt~~~~Nv~~i~v~G~FDDcQ~~VK~~f~d~~~~~~~~l~s~NSiN~~ 245 (514)
T 1kl7_A 166 SAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFDNCQDIVKAIFGDKEFNSKHNVGAVNSINWA 245 (514)
T ss_dssp HHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSCHHHHHHHHHHHHHCSSCC--CCBCCCCSCCHH
T ss_pred HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH
T ss_conf 99999955899824999616878754368874122799889999547869987999998503434322012556623099
Q ss_pred HCCCCHHHHHHHHHHHCC--CCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCC-CCCC
Q ss_conf 401105589999987447--7887389963465788788667775089877058723676335677532220102-3455
Q gi|254780465|r 226 RIMAQIVYYFVSSIALGS--PNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPE-IVME 302 (469)
Q Consensus 226 Ril~Q~vyYf~a~~~~~~--~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~-~~~~ 302 (469)
|||||+|||||||+|+.. .+++++|+||||||||++|||+||+|||||+|||||||+||+|+|||++|+|.++ ++.+
T Consensus 246 Rll~QivyYf~ay~~~~~~~~~~~v~f~VPTGNfGni~Ag~~Ak~MGlPI~kli~AtN~NdiL~rf~~tG~y~~~~~v~~ 325 (514)
T 1kl7_A 246 RILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNENDILDRFLKSGLYERSDKVAA 325 (514)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSCCHHHHHHHHSEEECCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf 99887899999999975302587048996357188899999999839980035783377066888974697434764456
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHC---------CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 65642001340137889998709---------708999999875202651055202211000121342138899999999
Q gi|254780465|r 303 TTSPAMDIQIPSNFERLLFEISG---------RNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIK 373 (469)
Q Consensus 303 T~SpsMDI~v~SNfERllf~l~~---------~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik 373 (469)
|+|||||||+|||||||||+++| +|+.++++||++|+++|.|+++.+.|+++++.|.|++++|+||+++||
T Consensus 326 T~SPSMDI~vsSNfERLl~~l~~~~~~~~d~~~~~~~v~~~M~~l~~~g~~~l~~~~l~~l~~~F~S~svsDeet~~~Ik 405 (514)
T 1kl7_A 326 TLSPAMDILISSNFERLLWYLAREYLANGDDLKAGEIVNNWFQELKTNGKFQVDKSIIEGASKDFTSERVSNEETSETIK 405 (514)
T ss_dssp CSCGGGCCSSCTTHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHSEEECCHHHHHHHTTTEEEEECCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEECHHHHHHHHH
T ss_conf 78850201352119999999703311135235559999999999986598103766621200220005667899999999
Q ss_pred HHHHHC----CCEECCCHHHHHHHHHHHH---HCCCCCEEEEECCCCCCCHHHHHHHHCCC-------CCCCHHHHHHHC
Q ss_conf 999863----9598383399999999987---47998399997188434988899980879-------888988988741
Q gi|254780465|r 374 SVLEKS----NYLVDPHTAVGIHAALACR---KSSSTPMVTLATAHPSKFPDTVKAASGIV-------PDCPISLEQMMR 439 (469)
Q Consensus 374 ~~y~~~----gyiiDPHTAvG~~aa~~~~---~~~~~p~VvLATAHPaKFpe~V~~Aig~~-------~~~P~~L~~l~~ 439 (469)
++|+++ ||++|||||||+.|+++++ .+.+.|+|+||||||||||++|++|||.. +++|++|++|++
T Consensus 406 ~vye~~~n~~gYllDPHTAVG~~a~~k~~~~~~~~~~p~VvLATAHPaKFpeaV~~Alg~~~~~~~~~~~lP~~L~~L~~ 485 (514)
T 1kl7_A 406 KIYESSVNPKHYILDPHTAVGVCATERLIAKDNDKSIQYISLSTAHPAKFADAVNNALSGFSNYSFEKDVLPEELKKLST 485 (514)
T ss_dssp HHHHHCCSSTTCCCCHHHHHHHHHHHHHHHHHCCTTSEEEEEECBCGGGGHHHHHHHHTTCSSCCHHHHTSCHHHHSGGG
T ss_pred HHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 99986275688487983799999999998743699986899958685666999999857776555556667699998864
Q ss_pred CCCCEEECCC-CHHHHHHHHHHHHHHHCC
Q ss_conf 7211010689-999999999961155205
Q gi|254780465|r 440 RPENCKVMNK-NIDEIKKFIKKRNMESKI 467 (469)
Q Consensus 440 k~e~~~~l~n-d~~~ik~fI~~k~~~~~~ 467 (469)
++|++..++| |+++||+||+++..+-|+
T Consensus 486 k~er~~~l~n~d~e~vk~~I~e~i~~~~~ 514 (514)
T 1kl7_A 486 LKKKLKFIERADVELVKNAIEEELAKMKL 514 (514)
T ss_dssp SCCCCCEECSCCHHHHHHHHHCSCSCC--
T ss_pred CCHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 76032541544799999999999997249
No 2
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=0 Score=1079.91 Aligned_cols=426 Identities=34% Similarity=0.555 Sum_probs=394.3
Q ss_pred CCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 93261789888888899986156787863286107888988998770999899999999875157899899999999986
Q gi|254780465|r 1 MKYISTRNVDLSLGFCDTILSGLATDGGLYIPKYIPRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSY 80 (469)
Q Consensus 1 M~y~STRg~~~~~~f~~a~~~Gla~DGGL~vP~~~p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay 80 (469)
|||+||||+.+.+||+|||++|||+|||||||++||+++.++|.+|+++||.|+|++|+++|++++|++++|++|+++||
T Consensus 1 M~y~Str~~~~~~~f~~a~~~gla~dgGLyvP~~~p~~~~~~~~~~~~~sy~~~a~~i~~~f~~~~~~~~~l~~~~~~a~ 80 (428)
T 1vb3_A 1 MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAF 80 (428)
T ss_dssp CCEEETTEEEEEECHHHHHHHCSBGGGBCEEESSCCCCCHHHHHHHTTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 90274798589969999987377999951668647899999999885889999999999986578899999999999863
Q ss_pred HHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 30476678604772488254662138981206823888999999997317982079971665404679998616678559
Q gi|254780465|r 81 HCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINM 160 (469)
Q Consensus 81 ~~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v 160 (469)
+.| +|+++++++.|+||||||||+||||+|||+++++++++++ +++.+|+||||||||+||++||++.+++++
T Consensus 81 ~~~-----~~~~~~~~~~~~lELfhGPT~sFKD~a~~~l~~~l~~~~~--~~~~~Il~ATSGDTGsAa~~a~~~~~~i~~ 153 (428)
T 1vb3_A 81 AFP-----APVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAG--DKPVTILTATSGDTGAAVAHAFYGLPNVKV 153 (428)
T ss_dssp CSC-----CCEEEEETTEEEEECCCSTTSBTHHHHHHHHHHHHHHHTT--TCCEEEEEECSSSHHHHHHHHTTTCTTEEE
T ss_pred CCC-----CCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHCCCCCCEE
T ss_conf 888-----8753413885689973489854241689999999754411--465089982899719999999737899629
Q ss_pred EEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHH
Q ss_conf 99735776760332131134478708997179658889999997501543135831134556544401105589999987
Q gi|254780465|r 161 YILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIA 240 (469)
Q Consensus 161 ~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~ 240 (469)
+||||+|+||++||+||||. ++|||+++|+|+|||||++||++|.|.++++++.|+|+|||||+||+||++||||+|+|
T Consensus 154 vvl~P~g~vS~~Q~~Qmtt~-~~nv~~i~V~G~fDDcq~lvk~~~~d~~~~~~~~l~s~NSiN~~Ril~Q~vyyf~a~~q 232 (428)
T 1vb3_A 154 VILYPRGKISPLQEKLFCTL-GGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQ 232 (428)
T ss_dssp EEEEETTCSCHHHHHHHHSC-CTTEEEEEEESCHHHHHHHHHHGGGCHHHHHHHTEECCSTTSHHHHHHTTHHHHHHHTT
T ss_pred EEECCCCCCCHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHCHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99778877626777640014-58778981689978999999998515444213343043545404555458889999998
Q ss_pred HCCC-CCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 4477-887389963465788788667775089877058723676335677532220102345565642001340137889
Q gi|254780465|r 241 LGSP-NRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFERL 319 (469)
Q Consensus 241 ~~~~-~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERl 319 (469)
+... ..+++|+||||||||++|||+||+|||||+++|||||+||+|+||+++|+|+++++.+|+||||||++||||||+
T Consensus 233 l~~~~~~~~~~~VPtGNfGni~Ag~~Ak~mGlPi~~~i~AtN~N~il~~~~~tG~y~~~~~~~T~SpaMDI~~psNfeRl 312 (428)
T 1vb3_A 233 LPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRV 312 (428)
T ss_dssp SCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCCHHHHHHHHSCCCCCCCCCCSSGGGCCSSCTTHHHH
T ss_pred HCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHH
T ss_conf 43467774587457540878899999986799822699964898007899974970235567867759886487688999
Q ss_pred HHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH
Q ss_conf 99870970899999987520265105520221100012134213889999999999986395983833999999999874
Q gi|254780465|r 320 LFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACRK 399 (469)
Q Consensus 320 lf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~~ 399 (469)
++.+ ++.|.++.. +.+.+++|+++.+ |++.|+++||++|||||||+.|++++ .
T Consensus 313 ~~l~--------~~~~~~l~~-----------------~~~~~~~de~~~~-i~~~~~~~gy~~DPHTAvg~~a~~~~-~ 365 (428)
T 1vb3_A 313 EELF--------RRKIWQLKE-----------------LGYAAVDDETTQQ-TMRELKELGYTSEPHAAVAYRALRDQ-L 365 (428)
T ss_dssp HHHH--------HHTTCCGGG-----------------SEEEECCHHHHHH-HHHHHHHTTCCCCHHHHHHHHHHHTT-C
T ss_pred HHHH--------HHHHHHHHC-----------------CCCEECCCHHHHH-HHHHHHHCCCEECCCHHHHHHHHHHH-H
T ss_conf 9999--------988888750-----------------6632037077999-99999984983188689999999996-3
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
Q ss_conf 79983999971884349888999808798889889887417211010689999999999961
Q gi|254780465|r 400 SSSTPMVTLATAHPSKFPDTVKAASGIVPDCPISLEQMMRRPENCKVMNKNIDEIKKFIKKR 461 (469)
Q Consensus 400 ~~~~p~VvLATAHPaKFpe~V~~Aig~~~~~P~~L~~l~~k~e~~~~l~nd~~~ik~fI~~k 461 (469)
+++.|+|+||||||+|||++|++|+|..+++|++|++++++++++..+++|+++||+||.+|
T Consensus 366 ~~~~~~VvLaTAHPaKF~d~V~~aig~~~~~P~~l~~l~~~~~~~~~i~~d~~~vk~~il~h 427 (428)
T 1vb3_A 366 NPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNH 427 (428)
T ss_dssp CTTCEEEEEECBCGGGGHHHHHHHHTSCCCCCHHHHHHHSSCCCCEEEESCHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCHHCCCCCCCHHHHHHHHHHC
T ss_conf 79996899978671007999999858898996899877577400131878899999999856
No 3
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=1.4e-45 Score=335.45 Aligned_cols=329 Identities=21% Similarity=0.296 Sum_probs=262.5
Q ss_pred CCEEEECC---------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 86047724---------882546621389812068238889999999973179820799716654046799986166785
Q gi|254780465|r 88 VTPLIQLN---------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRI 158 (469)
Q Consensus 88 ~~pl~~l~---------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i 158 (469)
-+||.+++ .++|+-.-++.||+||||.+|+.+...+.+....+....+|++||||+||. |+++++...++
T Consensus 130 ~TPL~~l~~L~~~~~G~~~l~~K~E~~nPTGSfKDRga~~~i~~a~~~~~~~~~~~~Vv~ASsGNtg~-AlAa~aa~~Gi 208 (486)
T 1e5x_A 130 NSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSA-ALSAYCASAGI 208 (486)
T ss_dssp CCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTCCCCEEEECCCSHHHH-HHHHHHHHHTC
T ss_pred CCCEEECHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHH-HHHHHHHHCCC
T ss_conf 88307833326764888749999778897667999999999999999631467863799736648999-99999987598
Q ss_pred EEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf 59997357767603321311344787089971796588899999975015431358311345565444011055899999
Q gi|254780465|r 159 NMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSS 238 (469)
Q Consensus 159 ~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~ 238 (469)
+++|++|++++|+.|..||... +++++.++|+||||+.+++++.. +..+...|++||.|+++|..++++.+
T Consensus 209 ~~~V~~P~~~~s~~k~~~~~~~---GA~Vi~v~g~~d~a~~~a~el~~------~~~~~~~~~~Np~~~~g~~t~~~Ei~ 279 (486)
T 1e5x_A 209 PSIVFLPANKISMAQLVQPIAN---GAFVLSIDTDFDGCMKLIREITA------ELPIYLANSLNSLRLEGQKTAAIEIL 279 (486)
T ss_dssp CEEEEEEGGGCCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH------HSCEEEGGGSHHHHHHHHTHHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHH------CCCEEECCCCCCCCCCCHHHHHHHHH
T ss_conf 0899547888469999999866---96059872457889999987630------35612026678532111136799999
Q ss_pred HHHCCCCCCEEEEEECCCHHHHHHHHHH----HHCCC----CCCEEEEECCCCCHHHHHHHCCC--HHCCCCCCCCCCCC
Q ss_conf 8744778873899634657887886677----75089----87705872367633567753222--01023455656420
Q gi|254780465|r 239 IALGSPNRNISFSVPTGNFGDIFAGYMA----KMMGL----PIEKLIIATNENDTLVRMFDMGM--YRPEIVMETTSPAM 308 (469)
Q Consensus 239 ~~~~~~~~~i~f~VPtGNfGni~Ag~~A----k~MGL----PI~kli~AtN~NdiL~rf~~tG~--y~~~~~~~T~SpsM 308 (469)
.|+.. ..+..+++|+||+|++++++.+ +.||+ |.-..+.++|.|.+. +.+.+|. +.+.....|++++|
T Consensus 280 ~ql~~-~~~d~vvvp~G~Gg~~~g~~~g~~~~~~~G~i~~~Pri~~vqa~~~~p~~-~~~~~g~~~~~~~~~~~T~a~~~ 357 (486)
T 1e5x_A 280 QQFDW-QVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLY-LHYKSGWKDFKPMTASTTFASAI 357 (486)
T ss_dssp HHTTS-CCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHH-HHHHTTTTTCCC-----------
T ss_pred HHCCC-CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHH-HHHHCCCCCCCCCCCCCEECCCC
T ss_conf 86146-77653143225874168899999999871766788715653026750455-78761887443466763113546
Q ss_pred CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHH
Q ss_conf 01340137889998709708999999875202651055202211000121342138899999999999863959838339
Q gi|254780465|r 309 DIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTA 388 (469)
Q Consensus 309 DI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTA 388 (469)
+|+.|+|++|.++.+...+ | ....|+|+|+.++++.. +++|+++|||||
T Consensus 358 ~i~~p~~~~~~l~~~~~~~--------------g----------------~~~~VsDeei~~a~~la-~~eGi~vePssA 406 (486)
T 1e5x_A 358 QIGDPVSIDRAVYALKKCN--------------G----------------IVEEATEEELMDAMAQA-DSTGMFICPHTG 406 (486)
T ss_dssp -----CCCHHHHHHHHHTT--------------C----------------EEEEECHHHHHHHHHHH-HHTTCCCCHHHH
T ss_pred CCCCCCCHHHHHHHHHCCC--------------C----------------EEEEECHHHHHHHHHHH-HHCCCEECHHHH
T ss_conf 3577755699999986138--------------8----------------69997999999999999-988958817889
Q ss_pred HHHHHHHHHHHC----CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH
Q ss_conf 999999998747----9983999971884349888999808798889889887417211010689999999999961155
Q gi|254780465|r 389 VGIHAALACRKS----SSTPMVTLATAHPSKFPDTVKAASGIVPDCPISLEQMMRRPENCKVMNKNIDEIKKFIKKRNME 464 (469)
Q Consensus 389 vG~~aa~~~~~~----~~~p~VvLATAHPaKFpe~V~~Aig~~~~~P~~L~~l~~k~e~~~~l~nd~~~ik~fI~~k~~~ 464 (469)
++++++.++... ++.++|++.|+|+.||||++....... +|+.+...... ...+++|+++|+++|++....
T Consensus 407 aalAal~kl~~~g~i~~~~~VVvl~TG~glK~~d~~~~~~~~~--~pd~~~~~~~~---p~~v~~d~~~v~~~l~~~l~~ 481 (486)
T 1e5x_A 407 VALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQSKIDYHSNA--IPDMACRFSNP---PVDVKADFGAVMDVLKSYLGS 481 (486)
T ss_dssp HHHHHHHHHHHTTSSCTTCCEEEEECBCGGGGHHHHHHHHTTC--CSSCCCTTCCC---CEEEESCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHCCCC--CCCHHHHHCCC---CCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999838999999389990788421657899860556--87068870678---745799999999999998533
No 4
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=99.96 E-value=9.5e-29 Score=218.18 Aligned_cols=298 Identities=21% Similarity=0.294 Sum_probs=221.5
Q ss_pred CEEEECCC---------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 60477248---------825466213898120682388899999999731798207997166540467999861667855
Q gi|254780465|r 89 TPLIQLNA---------NEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRIN 159 (469)
Q Consensus 89 ~pl~~l~~---------~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~ 159 (469)
+||.++.. +.|+=-=.+-||+||||.++..+ +.+..+.. ...|+++|||.+|.|++.. ..+.+.+
T Consensus 29 TPLv~l~~~~l~~~~g~~i~~K~E~~nptGSfK~R~a~~~---i~~a~~~g--~~~iv~assgn~~~a~a~~-a~~~g~~ 102 (351)
T 3aey_A 29 TPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLA---VSKAVEGG--AQAVACASTGNTAASAAAY-AARAGIL 102 (351)
T ss_dssp CCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHH---HHHHHHTT--CSEEEESCSSHHHHHHHHH-HHHHTSE
T ss_pred CCCEECCCCCCHHCCCCEEEEEECCCCCCCCHHHHHHHHH---HHHHHHCC--CCEEEEECCCHHHHHHHHH-HHHCCCC
T ss_conf 9886898803023139989998757797438499999999---99999779--9889997887799999999-9733897
Q ss_pred EEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 99973577676033213113447870899717965888999999750154313583113455654440110558999998
Q gi|254780465|r 160 MYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 160 v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
..+++|.+..+..+.++|... +..++.+.+++++|+..++++- ++......++.||.++.+|..+++..+.
T Consensus 103 ~~ivv~~~~~~~~~~~~~~~~---Ga~vi~~~~~~~~~~~~a~~~a------~~~~~~~~~~~~~~~~~G~~t~~~Ei~~ 173 (351)
T 3aey_A 103 AIVVLPAGYVALGKVAQSLVH---GARIVQVEGNFDDALRLTQKLT------EAFPVALVNSVNPHRLEGQKTLAFEVVD 173 (351)
T ss_dssp EEEEEETTCSCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHH------HHSSEEECSTTCHHHHHHHHHHHHHHHH
T ss_pred CEEECCCCHHHHHHHHHHHHC---CCEEEEECCCHHHHHHHHHHHH------HHCCCCCCCCCCHHHHHHHCCHHHHHHH
T ss_conf 447605751577889999846---9705750551788999999988------6257532245780477543139999999
Q ss_pred HHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCC------CCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCH
Q ss_conf 744778873899634657887886677750898------77058723676335677532220102345565642001340
Q gi|254780465|r 240 ALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLP------IEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIP 313 (469)
Q Consensus 240 ~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLP------I~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~ 313 (469)
|+... +..+++|.|..|+..++..+.+++.+ .-+.+...... ...+..| ++.+...|.+.+|.+..+
T Consensus 174 ql~~~--~~~~~~~~g~gg~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~--~~~~~~~t~a~~~~~~~~ 246 (351)
T 3aey_A 174 ELGDA--PHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAG---AAPLVLG--RPVERPETLATAIRIGNP 246 (351)
T ss_dssp HHSSC--CSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGG---GCHHHHT--SCCSSCCCSCGGGCCSSC
T ss_pred HHCCC--CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCC---CCCCCCC--CCCCCCCCCCCCCCCCCC
T ss_conf 86189--9888527767753205788998887604535766346553256---7533247--634678731003134688
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHH
Q ss_conf 13788999870970899999987520265105520221100012134213889999999999986395983833999999
Q gi|254780465|r 314 SNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHA 393 (469)
Q Consensus 314 SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~a 393 (469)
+.+++.+...... ......|+|+|+.++++.+++++|++++|++|+++++
T Consensus 247 ~~~~~~~~~~~~~------------------------------~~~~~~V~d~e~~~a~~~l~~~egi~~ePs~a~a~Aa 296 (351)
T 3aey_A 247 ASWQGAVRAKEES------------------------------GGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAG 296 (351)
T ss_dssp TTHHHHHHHHHHH------------------------------TCEEEEECHHHHHHHHHHHHHHTCCCBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHC------------------------------CCEEEEECHHHHHHHHHHHHHHCCEEECHHHHHHHHH
T ss_conf 7636788998614------------------------------8747878899999999999987596886678999999
Q ss_pred HHHHHH----CCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 999874----799839999718843498889998087988898898874
Q gi|254780465|r 394 ALACRK----SSSTPMVTLATAHPSKFPDTVKAASGIVPDCPISLEQMM 438 (469)
Q Consensus 394 a~~~~~----~~~~p~VvLATAHPaKFpe~V~~Aig~~~~~P~~L~~l~ 438 (469)
+.++.. .++..+|++.|+|+.|||++++++++..+++|..++.+.
T Consensus 297 l~~~~~~~~l~~~~~VV~v~sg~G~kd~~~~~~~~~~~~~~p~~~~~~~ 345 (351)
T 3aey_A 297 VFKLLREGRLEPESTVVLTLTGHGLKDPATAERVAELPPPVPARLEAVA 345 (351)
T ss_dssp HHHHHHTTCSCTTCEEEEEECBBGGGCHHHHCSCCCCCCCEESCHHHHH
T ss_pred HHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 9999983899987909999068975589999998389999976799999
No 5
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=99.96 E-value=3.1e-28 Score=214.63 Aligned_cols=296 Identities=23% Similarity=0.285 Sum_probs=214.8
Q ss_pred CEEEECC---------CCCEE-EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 6047724---------88254-6621389812068238889999999973179820799716654046799986166785
Q gi|254780465|r 89 TPLIQLN---------ANEFL-LELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRI 158 (469)
Q Consensus 89 ~pl~~l~---------~~~~v-lELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i 158 (469)
+||.++. .+.|+ +|-++ ||+||||.++..+ +....+.. +..|++||||+||.|++.+.+ +-++
T Consensus 31 TPL~~~~~Ls~~lg~~~~i~~K~E~~n-ptGSfK~Rga~~~---i~~a~~~~--~~~vi~assGN~g~a~A~~a~-~~g~ 103 (352)
T 2zsj_A 31 TPLIEADNLARAIGFKGKIYLKYEGLN-PTGSFKDRGMTLA---ISKAVEAG--KRAVICASTGNTSASAAAYAA-RAGL 103 (352)
T ss_dssp CCEEECHHHHHHHTCCSEEEEEEGGGS-TTSBTTHHHHHHH---HHHHHHTT--CCEEEECCSSHHHHHHHHHHH-HHTC
T ss_pred CCEEECHHHHHHHCCCCEEEEEECCCC-CCCCHHHHHHHHH---HHHHHHCC--CCEEEEECCCHHHHHHHHHHH-HCCC
T ss_conf 856782446998689987999987889-7669399999999---99999759--987999458779999999999-7199
Q ss_pred EEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf 59997357767603321311344787089971796588899999975015431358311345565444011055899999
Q gi|254780465|r 159 NMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSS 238 (469)
Q Consensus 159 ~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~ 238 (469)
..+++.|.+.++.-...+|... +..++.++|+||+|+...+++. ++......|++||.++.+|...++..+
T Consensus 104 ~~~i~v~~~~~~~~~~~~~~~~---GA~Vi~v~~~~~~~~~~~~~~~------~~~~~~~~~~~n~~~~~g~~t~~~Ei~ 174 (352)
T 2zsj_A 104 RAYVLLPKGAVAIGKLSQAMIY---GAKVLAIQGTFDDALNIVRKIG------ENFPVEIVNSVNPYRIEGQKTAAFEIC 174 (352)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHT---TCEEEEESSCHHHHHHHHHHHH------HHSSEEECSTTCTHHHHHHTHHHHHHH
T ss_pred CCEEECCCCCCCHHHHHHHHCC---CCEEEEECCCHHHHHHHHHHHH------HHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7413148875202232002227---9789993896699999999999------865845478887899999999999999
Q ss_pred HHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCE------EEEECCCC-CHHHHHHHCCCHHCCCCCCCCCCCCCCC
Q ss_conf 8744778873899634657887886677750898770------58723676-3356775322201023455656420013
Q gi|254780465|r 239 IALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEK------LIIATNEN-DTLVRMFDMGMYRPEIVMETTSPAMDIQ 311 (469)
Q Consensus 239 ~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~k------li~AtN~N-diL~rf~~tG~y~~~~~~~T~SpsMDI~ 311 (469)
-|+.. .+-.+++|+|+.|++.+.+.+.+++.|-.+ ++...-.+ ..+.. -.+.....+++.++.+.
T Consensus 175 ~q~~~--~~d~iv~~~G~GG~~~g~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 246 (352)
T 2zsj_A 175 DTLGE--APDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIVK------GYPIKNPQTIATAIKIG 246 (352)
T ss_dssp HHHSS--CCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHHH------TSCCSSCCCSCGGGCCS
T ss_pred HHCCC--CCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC------CCCCCCCCEECCCCCCC
T ss_conf 97399--99889995487178999999999847456351025532123345620014------65357874201322325
Q ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHH
Q ss_conf 40137889998709708999999875202651055202211000121342138899999999999863959838339999
Q gi|254780465|r 312 IPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGI 391 (469)
Q Consensus 312 v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~ 391 (469)
.+.+++..+..... ..-....|+|+|+.++++.++++.|++++|++|+++
T Consensus 247 ~~~~~~~~~~~~~~------------------------------~~~~~~~V~d~e~~~a~~~l~~~egi~~~ps~a~al 296 (352)
T 2zsj_A 247 NPYSWKSALKAAQE------------------------------SGGKIDAVSDSEILYAYKLIASTEGVFCEPASAASV 296 (352)
T ss_dssp SCTTHHHHHHHHHH------------------------------HTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHH
T ss_pred CCCCCHHHHHHHHH------------------------------CCCEEEEECCHHHHHHHHHHHHHCCCEECHHHHHHH
T ss_conf 67673677887764------------------------------086367865499999999999974958864889999
Q ss_pred HHHHHHHHC----CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 999998747----99839999718843498889998087988898898874
Q gi|254780465|r 392 HAALACRKS----SSTPMVTLATAHPSKFPDTVKAASGIVPDCPISLEQMM 438 (469)
Q Consensus 392 ~aa~~~~~~----~~~p~VvLATAHPaKFpe~V~~Aig~~~~~P~~L~~l~ 438 (469)
+++.++... ++..+|++.|.|+.||++++.+.+.....+|+.+.++.
T Consensus 297 aa~~~l~~~~~~~~~~~Vv~i~tG~G~kd~d~~~~~~~~~~~~p~~~~~~~ 347 (352)
T 2zsj_A 297 AGLIKLVREGFFKGGEVVTCTLTGNGLKDPDTAIKVCEEPITVPPDFDEVV 347 (352)
T ss_dssp HHHHHHHHTTCCCSCCEEEEEECBBGGGCHHHHHHHCCCCEEECSCHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 999999984789985989998587986589999998289878999999999
No 6
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=7.6e-26 Score=198.07 Aligned_cols=299 Identities=25% Similarity=0.310 Sum_probs=216.3
Q ss_pred CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEE
Q ss_conf 6047724-------882546621389812068238889999999973179820799716654046799986166785599
Q gi|254780465|r 89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMY 161 (469)
Q Consensus 89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~ 161 (469)
+||.+++ -+.|+=-=++.||+||||+++..+ +....+.. ...++++|||++|.|++.... +.+....
T Consensus 39 TPLv~~~~L~~~~g~~i~~K~E~~nptGSfKdR~a~~~---i~~~~~~~--~~~vv~~ssGn~~~a~Aa~a~-~~g~~~~ 112 (360)
T 2d1f_A 39 TPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMA---VTDALAHG--QRAVLCASTGNTSASAAAYAA-RAGITCA 112 (360)
T ss_dssp CCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHH---HHHHHHTT--CSEEEECCSSHHHHHHHHHHH-HHTCEEE
T ss_pred CCEEEHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH---HHHHHHCC--CCEEEEECCCHHHHHHHHHHH-HHCCCCE
T ss_conf 81678267689879989998636797668799999999---99998659--987999677889999999999-8289864
Q ss_pred EECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
Q ss_conf 97357767603321311344787089971796588899999975015431358311345565444011055899999874
Q gi|254780465|r 162 ILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIAL 241 (469)
Q Consensus 162 vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~ 241 (469)
+++|.+.++..+..+|... +..++.++|+||||+..+++...+.. .....++.|+.++.+|..++++.+-|+
T Consensus 113 ~v~~~~~~~~~~~~~~~~~---GA~Vv~~~g~~~~a~~~a~~~~~~~~-----~~~~~~~~n~~~~~g~~t~a~Ei~~ql 184 (360)
T 2d1f_A 113 VLIPQGKIAMGKLAQAVMH---GAKIIQIDGNFDDCLELARKMAADFP-----TISLVNSVNPVRIEGQKTAAFEIVDVL 184 (360)
T ss_dssp EEECSSCCCHHHHHHHHHT---TCEEEEBSSCHHHHHHHHHHHHHHCT-----TEEECSTTCHHHHHHHTHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHC---CCEEEEECCCHHHHHHHHHHHHHHHC-----CCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9840542148889899967---99899989938999999998654421-----434456788067887899999999973
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHH----HHCCC--CCCEEEEE--CCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCH
Q ss_conf 4778873899634657887886677----75089--87705872--3676335677532220102345565642001340
Q gi|254780465|r 242 GSPNRNISFSVPTGNFGDIFAGYMA----KMMGL--PIEKLIIA--TNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIP 313 (469)
Q Consensus 242 ~~~~~~i~f~VPtGNfGni~Ag~~A----k~MGL--PI~kli~A--tN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~ 313 (469)
.. .+..+++|.|+.|++.+++.. ..+|+ +.-+++.. .+.+. +.+ ..+.+...|++.++.+..+
T Consensus 185 ~~--~~~~~~~~~g~Gg~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~------~~~~~~~~t~a~~~~~~~~ 255 (360)
T 2d1f_A 185 GT--APDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAP-LVL------GEPVSHPETIATAIRIGSP 255 (360)
T ss_dssp SS--CCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCH-HHH------SSCCSSCCCSCGGGCCSSC
T ss_pred CC--CCCEEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC-CCC------CCCCCCCCEEEECCCCCCC
T ss_conf 99--98489965788542788888875521142434565213434345664-334------5667788632200034688
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHH
Q ss_conf 13788999870970899999987520265105520221100012134213889999999999986395983833999999
Q gi|254780465|r 314 SNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHA 393 (469)
Q Consensus 314 SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~a 393 (469)
+++...+.... +..-....|+|+|+.++++.++++.|++++|++|+++.+
T Consensus 256 ~~~~~~~~~~~------------------------------~~~d~~v~V~d~e~~~a~~~l~~~egi~~~pssa~~~aa 305 (360)
T 2d1f_A 256 ASWTSAVEAQQ------------------------------QSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAG 305 (360)
T ss_dssp TTHHHHHHHHH------------------------------HHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHH
T ss_pred CCCCHHHHHHH------------------------------CCCCEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHH
T ss_conf 66612476541------------------------------247758976879999999999998492786888999999
Q ss_pred HHHHHHC----CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCC
Q ss_conf 9998747----9983999971884349888999808798889889887417
Q gi|254780465|r 394 ALACRKS----SSTPMVTLATAHPSKFPDTVKAASGIVPDCPISLEQMMRR 440 (469)
Q Consensus 394 a~~~~~~----~~~p~VvLATAHPaKFpe~V~~Aig~~~~~P~~L~~l~~k 440 (469)
+.++... .+..+|++.|.|+.||+|++.+.+....++|..+..+.++
T Consensus 306 l~~~~~~~~~~~~~~Vv~v~tg~G~k~~~~~~~~~~~~~~~p~~~~~~~~~ 356 (360)
T 2d1f_A 306 LLKAIDDGWVARGSTVVCTVTGNGLKDPDTALKDMPSVSPVPVDPVAVVEK 356 (360)
T ss_dssp HHHHHHHTSSCTTCEEEEEECBBGGGCHHHHHSSCCCCCCBCSCHHHHHHT
T ss_pred HHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 999998389998496999917898669999997578767899999999986
No 7
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=99.85 E-value=4.7e-19 Score=150.98 Aligned_cols=260 Identities=12% Similarity=0.102 Sum_probs=179.5
Q ss_pred CCEEEEC-------CCCCEE-EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 8604772-------488254-66213898120682388899999999731798207997166540467999861667855
Q gi|254780465|r 88 VTPLIQL-------NANEFL-LELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRIN 159 (469)
Q Consensus 88 ~~pl~~l-------~~~~~v-lELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~ 159 (469)
.+||.++ +.+.|+ +|-++ ||+||||.++..+ +....++. ...|++||||+||.|.+.+.+ .-+++
T Consensus 46 ~TPL~~~~~Ls~~~G~~I~~K~E~~n-ptGSfKdRga~~~---i~~a~~~g--~~~vv~aSsGN~G~AlA~aa~-~~Gi~ 118 (372)
T 1p5j_A 46 KTPIRDSMALSKMAGTSVYLKMDSAQ-PSGSFKIRGIGHF---CKRWAKQG--CAHFVCSSAGNAGMAAAYAAR-QLGVP 118 (372)
T ss_dssp CCCEEEEHHHHHHHTSCEEEECGGGS-GGGBTTHHHHHHH---HHHHHHTT--CCEEEECCSSHHHHHHHHHHH-HHTCC
T ss_pred ECCCEEHHHHHHHHCCEEEEEECCCC-CCCCCHHHHHHHH---HHHHHHCC--CCEEEEECCCHHHHHHHHHHH-HCCCC
T ss_conf 78763237888987998999964689-7778399999999---99999769--987999796699999999999-82998
Q ss_pred EEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 99973577676033213113447870899717965888999999750154313583113455654440110558999998
Q gi|254780465|r 160 MYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 160 v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
+.|+.|.+ +++....+|... +..++.+.+++|||...++++..+.. .....-..-|+.++.+|....+..+.
T Consensus 119 ~~Iv~p~~-~~~~k~~~l~~~---Ga~Vi~~~~~~~~a~~~a~~~a~~~~----~~~~~~~~~n~~~i~g~~t~~~Ei~~ 190 (372)
T 1p5j_A 119 ATIVVPGT-TPALTIERLKNE---GATCKVVGELLDEAFELAKALAKNNP----GWVYIPPFDDPLIWEGHASIVKELKE 190 (372)
T ss_dssp EEEEECTT-CCHHHHHHHHHT---TCEEEECCSCHHHHHHHHHHHHHHST----TEEECCSSCCHHHHHHHTHHHHHHHH
T ss_pred CEEECCCC-CCHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHCCCC----CEEEECCCCCHHHHHHHCCHHHHHHH
T ss_conf 33027887-748886455525---83687751212568888887641468----76981266616667652021899998
Q ss_pred HHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECC-CCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 744778873899634657887886677-750898770587236-763356775322201023455656420013401378
Q gi|254780465|r 240 ALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATN-ENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFE 317 (469)
Q Consensus 240 ~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN-~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfE 317 (469)
|+.. .+..+++|.|.-|.+.+.+.+ ++++.|--+++.... ..+.+++-+..|.........|++.++.+..+ .+
T Consensus 191 ql~~--~pd~i~~~~G~Gg~~~Gi~~~~~~~~~~~~~ii~ve~~g~~~~~~s~~~g~~v~~~~~~t~a~glg~~~~--~~ 266 (372)
T 1p5j_A 191 TLWE--KPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTV--GS 266 (372)
T ss_dssp HCSS--CCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSC--CH
T ss_pred HHCC--CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEECEECCCCHHHHHHHHCCCEEEEECCCCEEECCCCCCC--CH
T ss_conf 5337--9875999977637889999999985288872000002688389999987974653023422311368864--24
Q ss_pred HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHH
Q ss_conf 8999870970899999987520265105520221100012134213889999999999986395983833999999999
Q gi|254780465|r 318 RLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALA 396 (469)
Q Consensus 318 Rllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~ 396 (469)
+. |++. ++ . .-....|+|+|+.++++.+++++|++++|.+|++++++.+
T Consensus 267 ~~-~~~~-----------~~----------------~--~d~~~~Vsd~e~~~a~~~l~~~eGi~~epSsaaalAal~~ 315 (372)
T 1p5j_A 267 QA-LKLF-----------QE----------------H--PIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYS 315 (372)
T ss_dssp HH-HHHH-----------HH----------------S--CEEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred HH-HHHH-----------HH----------------C--CCEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHH
T ss_conf 45-6788-----------75----------------4--9879998999999999999998496870889999999999
No 8
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive protein, jasmonic acid pathway; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=99.84 E-value=6.2e-19 Score=150.15 Aligned_cols=290 Identities=16% Similarity=0.098 Sum_probs=197.3
Q ss_pred HHHHHHHHH-HHHHCCCCCCCEEEEC-------CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 999999999-8630476678604772-------48825466213898120682388899999999731798207997166
Q gi|254780465|r 70 SKLRDIVNR-SYHCFRNAAVTPLIQL-------NANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATS 141 (469)
Q Consensus 70 ~~l~~ii~~-ay~~f~~~~~~pl~~l-------~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATS 141 (469)
+.|+.|+.. -|+... .+||.++ +.+.|+=--+..||+||||.++..+ +.+ +.+.++...|+++||
T Consensus 44 ~~~~~i~~~~v~~~~~---~TPl~~~~~l~~~~g~~i~~K~E~~~p~gS~K~r~a~~~---i~~-l~~~~~~~~v~~~s~ 116 (366)
T 3iau_A 44 QYLVDILASPVYDVAI---ESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNM---MSN-LSREELDKGVITASA 116 (366)
T ss_dssp HHHHHHHHCCGGGTCC---CCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHH---HHT-SCHHHHHHCEEEECS
T ss_pred HHHHHHHHCCCEEEEE---CCCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH---HHH-HHHCCCCCEEEEECC
T ss_conf 9999986185416610---495111878889869969998524898888589999999---999-987599877999687
Q ss_pred CCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC
Q ss_conf 54046799986166785599973577676033213113447870899717965888999999750154313583113455
Q gi|254780465|r 142 GDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINS 221 (469)
Q Consensus 142 GDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NS 221 (469)
|++|.|.+.+.+ .-++++.|+.|++ ++....++|... | ..++.+.+++|++.....++-.... .. ....+
T Consensus 117 Gn~g~a~A~~a~-~~g~~~~i~mp~~-~~~~K~~~~~~~-G--a~vi~~~~~~d~~~~~~~~~a~~~~----~~-~~~~~ 186 (366)
T 3iau_A 117 GNHAQGVALAGQ-RLNCVAKIVMPTT-TPQIKIDAVRAL-G--GDVVLYGKTFDEAQTHALELSEKDG----LK-YIPPF 186 (366)
T ss_dssp SHHHHHHHHHHH-HTTCCEEEEECTT-CCHHHHHHHHHT-T--CEEEECCSSHHHHHHHHHHHHHHHT----CE-ECCSS
T ss_pred CHHHHHHHHHHH-HHCCCCEEECCCC-CCHHHHHHHHHH-C--CCEEECCCCHHHHHHHHHHHHHHHC----CC-CCCCC
T ss_conf 689999999999-8199852435888-879999999971-7--7612214554779999999998639----82-55346
Q ss_pred CCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEE-ECCCCCHHHHHHHCCCHHCCCC
Q ss_conf 654440110558999998744778873899634657887886677750898770587-2367633567753222010234
Q gi|254780465|r 222 INWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLII-ATNENDTLVRMFDMGMYRPEIV 300 (469)
Q Consensus 222 IN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~-AtN~NdiL~rf~~tG~y~~~~~ 300 (469)
-|..++.+|-.+......|. .+.-.+++|+|+-|++.+.+.+-+..-|--|+|. .+...+.+.+.+..|.......
T Consensus 187 ~~~~~~~G~~t~~~ei~eq~---~~~d~Ivv~vG~GG~~aGi~~~lk~~~~~ikii~Vep~~~~~~~~s~~~g~~~~~~~ 263 (366)
T 3iau_A 187 DDPGVIKGQGTIGTEINRQL---KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMTLSLHEGHRVKLSN 263 (366)
T ss_dssp SSHHHHHHHHHHHHHHHHHC---CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHHHHHHHTSCCEESC
T ss_pred CCHHHHHHHHHHHHHHHHHC---CCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCC
T ss_conf 77467887455887899874---998979996281489999999998608996389735777668999986599776789
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 55656420013401378899987097089999998752026510552022110001213421388999999999998639
Q gi|254780465|r 301 METTSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSN 380 (469)
Q Consensus 301 ~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~g 380 (469)
..|++.++++..++.+..-+..- ..-....|+|+|+...++.++++.|
T Consensus 264 ~~t~~~g~~~~~~~~~~~~~~~~--------------------------------~v~~~~~V~d~ei~~A~~~la~~eG 311 (366)
T 3iau_A 264 VDTFADGVAVALVGEYTFAKCQE--------------------------------LIDGMVLVANDGISAAIKDVYDEGR 311 (366)
T ss_dssp CCCSSGGGCCSSCCHHHHHHHHH--------------------------------HCCEEEEECHHHHHHHHHHHHHHHS
T ss_pred CCCEECCCCCCCCCHHHHHHHHH--------------------------------HCCCEEEECHHHHHHHHHHHHHHCC
T ss_conf 99630255578640447899885--------------------------------0781799899999999999999869
Q ss_pred CEECCCHHHHHHHHHHHHHC---CCCCEEEEECC
Q ss_conf 59838339999999998747---99839999718
Q gi|254780465|r 381 YLVDPHTAVGIHAALACRKS---SSTPMVTLATA 411 (469)
Q Consensus 381 yiiDPHTAvG~~aa~~~~~~---~~~p~VvLATA 411 (469)
++++|++|++++++.++... .+..+|++-|-
T Consensus 312 I~~eps~a~a~Aa~~~~~~~~~~~g~~VV~ilsG 345 (366)
T 3iau_A 312 NILETSGAVAIAGAAAYCEFYKIKNENIVAIASG 345 (366)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCCSCEEEEEECB
T ss_pred CEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf 5773779999999999877456995829999068
No 9
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cancer cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=99.83 E-value=1.6e-17 Score=140.37 Aligned_cols=289 Identities=16% Similarity=0.130 Sum_probs=189.0
Q ss_pred CCEEEEC-------CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 8604772-------488254662138981206823888999999997317982079971665404679998616678559
Q gi|254780465|r 88 VTPLIQL-------NANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINM 160 (469)
Q Consensus 88 ~~pl~~l-------~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v 160 (469)
.+||.++ +-++|+=-=++-||+||||.++..+ +....++.. ..|++||||++|.|.+.+.+ .-++++
T Consensus 7 ~TPl~~~~~ls~~~G~~i~~K~E~~nptGSfK~R~a~~~---i~~a~~~g~--~~vv~aSsGN~g~alA~~a~-~~G~~~ 80 (318)
T 2rkb_A 7 VTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHF---CQEMAKKGC--RHLVCSSGGNAGIAAAYAAR-KLGIPA 80 (318)
T ss_dssp CCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHH---HHHHHHTTC--CEEEECCCSHHHHHHHHHHH-HHTCCE
T ss_pred ECCCEEHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH---HHHHHHCCC--CEEEEECCCHHHHHHHHHHH-HCCCCE
T ss_conf 688667488689869989999557997568299999999---999997699--87999789889999999999-839823
Q ss_pred EEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHH
Q ss_conf 99735776760332131134478708997179658889999997501543135831134556544401105589999987
Q gi|254780465|r 161 YILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIA 240 (469)
Q Consensus 161 ~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~ 240 (469)
.|+.|++ +++...++|... +..++.+.+++|++...++++..+... ...-...|+.++.+|....+....|
T Consensus 81 ~i~~p~~-~~~~k~~~~~~~---Ga~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~G~~t~~~Ei~~q 151 (318)
T 2rkb_A 81 TIVLPES-TSLQVVQRLQGE---GAEVQLTGKVWDEANLRAQELAKRDGW-----ENVPPFDHPLIWKGHASLVQELKAV 151 (318)
T ss_dssp EEEECTT-CCHHHHHHHHHT---TCEEEECCSSHHHHHHHHHHHHHSTTE-----EECCSSCSHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-CCHHHHHHHHHC---CCEEEECCCCHHHHHHHHHHHHHHCCC-----EEECCCCCHHHHHHCCCCHHHHHHH
T ss_conf 5126765-626678888605---967853387567777899999985398-----8522568878884245552589998
Q ss_pred HCCCCCCEEEEEECCCHHHHHHHHH-HHHCCCCCCEEE-EECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 4477887389963465788788667-775089877058-72367633567753222010234556564200134013788
Q gi|254780465|r 241 LGSPNRNISFSVPTGNFGDIFAGYM-AKMMGLPIEKLI-IATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFER 318 (469)
Q Consensus 241 ~~~~~~~i~f~VPtGNfGni~Ag~~-Ak~MGLPI~kli-~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfER 318 (469)
+.. .+..+++|+|+-|.+.+++. .++++-|--+++ +.....+.+.+.+..|.....+...|++.+| ..+....+
T Consensus 152 l~~--~~d~~v~~~ggGg~~~g~~~~~~~~~~~~~~ii~ve~~~~~~~~~s~~~g~~~~~~~~~t~~~~~--~~~~~~~~ 227 (318)
T 2rkb_A 152 LRT--PPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSL--GAKTVAAR 227 (318)
T ss_dssp SSS--CCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSSCGGG--CCSBCCHH
T ss_pred HCC--CCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCEECCCCCCCCCCC--CCCCCCHH
T ss_conf 388--76269870678860778889999855998569841356771688998669943302332223235--66655504
Q ss_pred HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHH---
Q ss_conf 99987097089999998752026510552022110001213421388999999999998639598383399999999---
Q gi|254780465|r 319 LLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAAL--- 395 (469)
Q Consensus 319 llf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~--- 395 (469)
-+ ++. +. ..-....|+|+|+...++.++++.|++++|++|+++.++.
T Consensus 228 ~~-~~~-----------~~------------------~~~~~~~V~d~e~~~a~~~l~~~egi~~epssa~~lAal~~~~ 277 (318)
T 2rkb_A 228 AL-ECM-----------QV------------------CKIHSEVVEDTEAVSAVQQLLDDERMLVEPACGAALAAIYSGL 277 (318)
T ss_dssp HH-HHH-----------HH------------------SCEEEEEECHHHHHHHHHHHHHHHCBCCCHHHHHHHHHHHTSH
T ss_pred HH-HHH-----------HH------------------CCCEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH
T ss_conf 54-555-----------52------------------2655898889999999999999859477188999999999999
Q ss_pred --HHHHC-----C-CCCEEEEECCCCCCCHH--HHHHHHC
Q ss_conf --98747-----9-98399997188434988--8999808
Q gi|254780465|r 396 --ACRKS-----S-STPMVTLATAHPSKFPD--TVKAASG 425 (469)
Q Consensus 396 --~~~~~-----~-~~p~VvLATAHPaKFpe--~V~~Aig 425 (469)
+.... + ...++++.+.+-.++.. .+..-+|
T Consensus 278 ~~~~~~~~~~~~~~~~Vv~v~~gGn~~~~~~~~~~~~~~g 317 (318)
T 2rkb_A 278 LRRLQAEGCLPPSLTSVVVIVCGGNNINSRELQALKTHLG 317 (318)
T ss_dssp HHHHHHTTSSCSSCSCEEEEECBCSSCCHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCC
T ss_conf 9999862776789998999980899989999999999858
No 10
>1ve5_A Threonine deaminase; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus HB8} SCOP: c.79.1.1
Probab=99.83 E-value=1.1e-18 Score=148.28 Aligned_cols=272 Identities=15% Similarity=0.086 Sum_probs=182.6
Q ss_pred CCEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 86047724-------88254662138981206823888999999997317982079971665404679998616678559
Q gi|254780465|r 88 VTPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINM 160 (469)
Q Consensus 88 ~~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v 160 (469)
-+||.++. .+.|+=-=++-||+||||.++. ...++. .....|++||||+||.|.+.+.+ .-++++
T Consensus 20 ~TPLv~~~~L~~~~g~~i~~K~E~~nptGSfKdRgA~------~~~~~~-~~~~~vv~assGN~g~a~A~~a~-~~G~~~ 91 (311)
T 1ve5_A 20 RTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGAL------SKALAL-ENPKGLLAVSSGNHAQGVAYAAQ-VLGVKA 91 (311)
T ss_dssp CCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHH------HHHHHS-SSCCCEEEECSSHHHHHHHHHHH-HHTCCE
T ss_pred CCCEEEHHHHHHHHCCEEEEEECCCCCCCCCHHHHHH------HHHHHH-CCCCEEEEECCCCCHHHHHHHHH-HCCCCE
T ss_conf 8841684675587699799997789976786999999------999982-77980999589962689999999-769740
Q ss_pred EEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC-CCHHHCCCCHHHHHHHHH
Q ss_conf 9973577676033213113447870899717965888999999750154313583113455-654440110558999998
Q gi|254780465|r 161 YILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINS-INWARIMAQIVYYFVSSI 239 (469)
Q Consensus 161 ~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NS-IN~~Ril~Q~vyYf~a~~ 239 (469)
.|+.|.+ .++.++.+|.... ..++.+++++|+|.....+...+. ..+. +++ -|+.++.+|..+......
T Consensus 92 ~v~~p~~-~~~~~~~~~~~~g---a~vi~~~~~~~~~~~~a~~~~~~~---~~~~---~~~~~n~~~~~g~~t~~~Ei~~ 161 (311)
T 1ve5_A 92 LVVMPED-ASPYKKACARAYG---AEVVDRGVTAKNREEVARALQEET---GYAL---IHPFDDPLVIAGQGTAGLELLA 161 (311)
T ss_dssp EEECCCC---CCHHHHHHHTT---CEEECTTCCTTTHHHHHHHHHHHH---CCEE---CCSSSSHHHHHHHHHHHHHHHH
T ss_pred ECCCCCC-CCHHHHHHHHHCC---CCEEEEECCCHHHHHHHHHHHHHC---CCCC---CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 1158887-6488888888516---744887303105789988767516---9704---6878987799877657888999
Q ss_pred HHCCCC-CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE-CCCCCHHHHHHHCCCHHC-CCCCCCCCCCCCCCCHHHH
Q ss_conf 744778-8738996346578878866777508987705872-367633567753222010-2345565642001340137
Q gi|254780465|r 240 ALGSPN-RNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA-TNENDTLVRMFDMGMYRP-EIVMETTSPAMDIQIPSNF 316 (469)
Q Consensus 240 ~~~~~~-~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A-tN~NdiL~rf~~tG~y~~-~~~~~T~SpsMDI~v~SNf 316 (469)
|+...+ .+..+++|.|+-|.+.+.+.+.+.--|.-++|.. ....+.+.+.+..|.... .....|.+..+....+++.
T Consensus 162 q~~~~~~~~~~v~~~~g~Gg~~~g~~~~~~~~~~~~~iigVe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (311)
T 1ve5_A 162 QAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLSLGER 241 (311)
T ss_dssp HHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCCSSCCTT
T ss_pred HHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHH
T ss_conf 99853997318993798537899998767651887459999615653588764169524227875300145676765477
Q ss_pred H-HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHH
Q ss_conf 8-899987097089999998752026510552022110001213421388999999999998639598383399999999
Q gi|254780465|r 317 E-RLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAAL 395 (469)
Q Consensus 317 E-Rllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~ 395 (469)
- .++.. . .-....|+|+|+.+.++.++++.|.+++|++|++++++.
T Consensus 242 ~~~~~~~-------------------------------~--~~~~v~V~d~e~~~a~~~la~~eGi~~epssa~alAa~~ 288 (311)
T 1ve5_A 242 TFPILRE-------------------------------R--VDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVL 288 (311)
T ss_dssp THHHHHH-------------------------------H--CCEEEEECHHHHHHHHHHHHHHTCBCCCGGGGHHHHHHH
T ss_pred HHHHHHH-------------------------------C--CCEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHH
T ss_conf 7999730-------------------------------4--885999899999999999999859587088999999999
Q ss_pred HHHHCCCCCEEEEEC
Q ss_conf 987479983999971
Q gi|254780465|r 396 ACRKSSSTPMVTLAT 410 (469)
Q Consensus 396 ~~~~~~~~p~VvLAT 410 (469)
+.....+..+|++-|
T Consensus 289 ~~~~~~~~~Vv~vl~ 303 (311)
T 1ve5_A 289 EHGARLPQTLALLLS 303 (311)
T ss_dssp HHGGGSCSEEEEEEC
T ss_pred HHHHHCCCCEEEEEC
T ss_conf 856765998999958
No 11
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal phosphate, isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=99.81 E-value=1e-17 Score=141.67 Aligned_cols=304 Identities=14% Similarity=0.134 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 899999999986304766786047724-------8825466213898120682388899999999731798207997166
Q gi|254780465|r 69 SSKLRDIVNRSYHCFRNAAVTPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATS 141 (469)
Q Consensus 69 ~~~l~~ii~~ay~~f~~~~~~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATS 141 (469)
.+-|+.|...- .++--..+||.+.. .+.|+=-=++-||+||||.|+-- .+.. +.++.+...|++|||
T Consensus 14 ~dyl~~Il~a~--Vyd~~~~TPL~~~~~Ls~~~g~~V~lK~E~lqptgSFK~RGA~n---~i~~-l~~e~~~~gVV~aSa 87 (514)
T 1tdj_A 14 AEYLRAVLRAP--VYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYA---MMAG-LTEEQKAHGVITASA 87 (514)
T ss_dssp HHHHHHHHHCC--GGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHH---HHHT-TTTSSCSSSCEEEEC
T ss_pred HHHHHHHHHCC--CCCCCCCCCCEEHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHH---HHHH-HHHHCCCCEEEEECC
T ss_conf 89999997273--50004478616777766986998999987889888839999999---9999-998479998999787
Q ss_pred CCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC
Q ss_conf 54046799986166785599973577676033213113447870899717965888999999750154313583113455
Q gi|254780465|r 142 GDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINS 221 (469)
Q Consensus 142 GDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NS 221 (469)
|++|.|.+.+.+ .-++++.|+.|.+ .+.....+|-.. | ..++-+.++||+|....+++...... .-++.
T Consensus 88 GNha~gvA~aA~-~lGi~~~IvmP~~-t~~~Ki~~~r~~-G--AeVv~~g~~~~~a~~~a~~~~~~~g~------~~i~p 156 (514)
T 1tdj_A 88 GNHAQGVAFSSA-RLGVKALIVMPTA-TADIKVDAVRGF-G--GEVLLHGANFDEAKAKAIELSQQQGF------TWVPP 156 (514)
T ss_dssp SSSHHHHHHHHH-HTTCCEEEECCSS-CCHHHHHHHHHH-S--CEEECCCSSHHHHHHHHHHHHHHHCC------EECCS
T ss_pred CHHHHHHHHHHH-HCCCCEEEEECCC-CHHHHHHHHHHH-C--CEEEECCCCCHHHHHHHHHHHHCCCC------CCCCC
T ss_conf 699999999999-8499789999799-879999999981-9--86998487201456655544412432------35665
Q ss_pred C-CHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEE-ECCCCCHHHHHHHCCCHHCCC
Q ss_conf 6-54440110558999998744778873899634657887886677750898770587-236763356775322201023
Q gi|254780465|r 222 I-NWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLII-ATNENDTLVRMFDMGMYRPEI 299 (469)
Q Consensus 222 I-N~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~-AtN~NdiL~rf~~tG~y~~~~ 299 (469)
- ++..+.+|-........|+. +.-.++||.|+-|.+.+...+.|+.-|--|+|. -....+.+++.+..|.-...+
T Consensus 157 ~ddp~viaGqgTi~~EI~~q~~---~~D~IvvpvGgGGliaGia~~lK~~~P~ikIIgVEp~~a~~~~~sl~~G~~v~~~ 233 (514)
T 1tdj_A 157 FDHPMVIAGQGTLALELLQQDA---HLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLP 233 (514)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCT---TCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHHHHHHHTSCCCCS
T ss_pred CCCHHHHHCCCCHHHHHHHHCC---CCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEECCC
T ss_conf 5687776403217889997569---9999999276419999999999986998718877843155688787579740368
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 45565642001340137889998709708999999875202651055202211000121342138899999999999863
Q gi|254780465|r 300 VMETTSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKS 379 (469)
Q Consensus 300 ~~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~ 379 (469)
...|.+..+.+..+++.- |.+.. .. .-....|+|+|+..+|+.+++++
T Consensus 234 ~~~t~AdGiav~~vg~~~---~~l~~---------------------------~~--vD~vv~Vsd~ei~~Ai~~L~e~~ 281 (514)
T 1tdj_A 234 RVGLFAEGVAVKRIGDET---FRLCQ---------------------------EY--LDDIITVDSDAICAAMKDLFEDV 281 (514)
T ss_dssp CCCSSSSTTCCSSCCCHH---HHHHT---------------------------TS--CCEEEEECHHHHHHHHHHHHHHT
T ss_pred CCCCEECCCCCCCCCHHH---HHHHH---------------------------CC--CCEEEEECHHHHHHHHHHHHHHC
T ss_conf 888554244589876788---87655---------------------------05--76899939999999999999982
Q ss_pred CCEECCCHHHHHHHHHHHH---HCCCCCEEEEECCCCCCC---HHHHHHHH
Q ss_conf 9598383399999999987---479983999971884349---88899980
Q gi|254780465|r 380 NYLVDPHTAVGIHAALACR---KSSSTPMVTLATAHPSKF---PDTVKAAS 424 (469)
Q Consensus 380 gyiiDPHTAvG~~aa~~~~---~~~~~p~VvLATAHPaKF---pe~V~~Ai 424 (469)
+.+++|++|++++|+.++. ...+..+|++-|---..| ..+++.++
T Consensus 282 givvEpagA~alAAl~k~~~~~~~~gk~VV~IlsGgNid~~~l~~i~~r~l 332 (514)
T 1tdj_A 282 RAVAEPSGALALAGMKKYIALHNIRGERLAHILSGANVNFHGLRYVSERCE 332 (514)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHTCCSCEEEEECCCCCCCTTHHHHHHHHHH
T ss_pred CCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 989975799999999998764004798679994489968788999999988
No 12
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, L-threonine metabolism, alternate conformation lyase; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=99.81 E-value=1.9e-17 Score=139.78 Aligned_cols=279 Identities=14% Similarity=0.104 Sum_probs=189.2
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHC
Q ss_conf 88254662138981206823888999999997317982079971665404679998616678559997357767603321
Q gi|254780465|r 96 ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQK 175 (469)
Q Consensus 96 ~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~ 175 (469)
.++|+=-=++-||+||||.++..+ +.+.. ++++...|+++|||.||.|.+.+.+ .-++++.|+.|.+ +++....
T Consensus 55 ~~i~~K~E~~nPtGSfKdRga~~~---i~~a~-~~~~~~~iv~~SsGN~g~a~A~~a~-~~g~~~~i~~p~~-~~~~k~~ 128 (342)
T 2gn0_A 55 GEIFLKFENMQRTGSFKIRGAFNK---LSSLT-EAEKRKGVVACSAGNHAQGVSLSCA-MLGIDGKVVMPKG-APKSKVA 128 (342)
T ss_dssp SEEEEEEGGGSGGGBTHHHHHHHH---HHHSC-HHHHHTCEEEECSSHHHHHHHHHHH-HHTCCEEEEECTT-SCHHHHH
T ss_pred CEEEEEECCCCCCCCHHHHHHHHH---HHHHH-HHCCCCCEEEECCCHHHHHHHHHHH-HCCCCEEECCCCC-CHHHHHH
T ss_conf 989999678897459499999999---99998-7088881487576399999999999-8199636305654-2078888
Q ss_pred CCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 31134478708997179658889999997501543135831134556544401105589999987447788738996346
Q gi|254780465|r 176 QMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTG 255 (469)
Q Consensus 176 qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtG 255 (469)
+|.... ..++.+.+++++|.....++..+... +.+ -+.-|..++.+|...-...+-|+. +.-.+++|+|
T Consensus 129 ~l~~~G---A~V~~~~~~~~~~~~~~~~~~~~~g~---~~~--~~~~~p~~~~g~~t~a~Ei~~q~~---~~d~vv~~vG 197 (342)
T 2gn0_A 129 ATCDYS---AEVVLHGDNFNDTIAKVSEIVETEGR---IFI--PPYDDPKVIAGQGTIGLEIMEDLY---DVDNVIVPIG 197 (342)
T ss_dssp HHHHHS---CEEEECCSSHHHHHHHHHHHHHHHCC---EEC--CSSSSHHHHHHHHHHHHHHHHHCT---TCCEEEEECS
T ss_pred HHHCCC---CEEEECCCCCCHHHHHHHHHHHCCCC---CCC--CCCCCHHHHHHHHHHHHHHHHHHC---CCCEEEEEEC
T ss_conf 765258---34753157841125778886411698---556--777881699999999999999708---8986999736
Q ss_pred CHHHHHHHHHH-HHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 57887886677-75089877058723676335677532220102345565642001340137889998709708999999
Q gi|254780465|r 256 NFGDIFAGYMA-KMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFERLLFEISGRNSLLVKEA 334 (469)
Q Consensus 256 NfGni~Ag~~A-k~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~ 334 (469)
+-|.+.+-+.+ +.++--++-+.+-....+.+++.+..|.........|++.++++..|++..+-+..
T Consensus 198 ~Gg~~~Gi~~~~~~~~~~~~i~~v~~~~~~~~~~~~~~g~~~~~~~~~t~~~~~~~~~~~~~~~~~~~------------ 265 (342)
T 2gn0_A 198 GGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVR------------ 265 (342)
T ss_dssp SSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCCHHHHHHHH------------
T ss_pred CCHHHHHHEEHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH------------
T ss_conf 75787743212211587633655420578536678755975435567753433467984277899998------------
Q ss_pred HHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH----CCCCCEEEEEC
Q ss_conf 87520265105520221100012134213889999999999986395983833999999999874----79983999971
Q gi|254780465|r 335 FYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACRK----SSSTPMVTLAT 410 (469)
Q Consensus 335 m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~~----~~~~p~VvLAT 410 (469)
+.. -....|+|+|+.++++.++++.|++++|.+|+++.++.+... .++.-.++|.+
T Consensus 266 ------------------~~~--d~~v~V~d~e~~~a~~~L~~~eGi~~eps~a~a~Aal~~~~~~~~~~~~~vVvvl~G 325 (342)
T 2gn0_A 266 ------------------ELV--DDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHIQNRKTVSIISG 325 (342)
T ss_dssp ------------------HHC--CEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHTTTHHHHTTSEEEEEECB
T ss_pred ------------------HCC--CCEEEECHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf ------------------618--970788999999999999998690771679999999999876423899988999658
Q ss_pred CCCCCCHHHHHHHHC
Q ss_conf 884349888999808
Q gi|254780465|r 411 AHPSKFPDTVKAASG 425 (469)
Q Consensus 411 AHPaKFpe~V~~Aig 425 (469)
++ .=.+.+.+.++
T Consensus 326 Gn--id~~~~~~~~~ 338 (342)
T 2gn0_A 326 GN--IDLSRVSQITG 338 (342)
T ss_dssp CC--CCHHHHHHHHC
T ss_pred CC--CCHHHHHHHHH
T ss_conf 99--99999999986
No 13
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=99.79 E-value=2.3e-17 Score=139.31 Aligned_cols=274 Identities=15% Similarity=0.059 Sum_probs=182.1
Q ss_pred CCEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 86047724-------88254662138981206823888999999997317982079971665404679998616678559
Q gi|254780465|r 88 VTPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINM 160 (469)
Q Consensus 88 ~~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v 160 (469)
.+||.++. .++|+=-=++-||+||||.++..+ +... .+......|+++|||.+|.|.+.+.+ .-++++
T Consensus 26 ~TPl~~~~~L~~~~g~~i~~K~E~~nptGS~KdRga~~~---l~~~-~~~~~~~~vv~~ssGN~g~a~A~~a~-~~g~~~ 100 (323)
T 1v71_A 26 KTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNA---LSQL-NEAQRKAGVLTFSSGNHAQAIALSAK-ILGIPA 100 (323)
T ss_dssp CCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHH---HTTC-CHHHHHHCEEECCSSHHHHHHHHHHH-HTTCCE
T ss_pred CCCEEEHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH---HHHH-HHCCCCCEEEEECCCCHHHHHHHHHC-CCCCCE
T ss_conf 897668356538879969999778998789899999999---9987-76157776998479728899998720-054321
Q ss_pred EEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHH
Q ss_conf 99735776760332131134478708997179658889999997501543135831134556544401105589999987
Q gi|254780465|r 161 YILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIA 240 (469)
Q Consensus 161 ~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~ 240 (469)
.|+.|.+ .|+....+|....+ .++.+++++|+|+..++++-.+.. -+.+...| |+.++..+..-....+.|
T Consensus 101 ~i~~p~~-~~~~k~~~~~~~Ga---~vi~~~~~~~~~~~~a~~~a~~~~---~~~~~~~~--~~~~~~g~~t~~~Ei~~q 171 (323)
T 1v71_A 101 KIIMPLD-APEAKVAATKGYGG---QVIMYDRYKDDREKMAKEISEREG---LTIIPPYD--HPHVLAGQGTAAKELFEE 171 (323)
T ss_dssp EEEEETT-CCHHHHHHHHHTTC---EEEEECTTTTCHHHHHHHHHHHHT---CBCCCSSS--SHHHHHHHTHHHHHHHHH
T ss_pred EECCCCC-CCHHHHHHHHHCCC---CEEEECCCCHHHHHHHHHHHHHCC---CEECCCCC--CHHHHHHHHHHHHHHHHH
T ss_conf 5226777-88899999998299---779955741379999999998639---99469888--467999999999999985
Q ss_pred HCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE-CCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 447788738996346578878866777508987705872-3676335677532220102345565642001340137889
Q gi|254780465|r 241 LGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA-TNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFERL 319 (469)
Q Consensus 241 ~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A-tN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERl 319 (469)
+. ++-.+++|+|+-|++.+.+.+.+..-|--+++.. ....+.+.+.+..|.........+.+..+.+..++.+--
T Consensus 172 ~~---~~d~vv~~~G~Gg~~~Gi~~~~~~~~~~~~ii~v~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 247 (323)
T 1v71_A 172 VG---PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTF- 247 (323)
T ss_dssp HC---CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSCCHHHH-
T ss_pred HC---CCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCHHHH-
T ss_conf 48---98999993782788999999999759985386114455514655213686311577633325545577656779-
Q ss_pred HHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHC-CCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
Q ss_conf 9987097089999998752026510552022110001-213421388999999999998639598383399999999987
Q gi|254780465|r 320 LFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSL-SFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACR 398 (469)
Q Consensus 320 lf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~-~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~ 398 (469)
.+ +++ .-....|+|+|+...+|.+++++|.+++|.+|++++|+++++
T Consensus 248 --~~------------------------------~~~~~~~~v~V~d~e~~~a~r~l~~~eGi~~eps~a~~~Aa~~~~~ 295 (323)
T 1v71_A 248 --SI------------------------------IKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMK 295 (323)
T ss_dssp --HH------------------------------HHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGGHHHHHHHHTG
T ss_pred --HH------------------------------HHHCCCCEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH
T ss_conf --99------------------------------9744885067889999999999999829677188999999999868
Q ss_pred HC-CCCCEEEEECC
Q ss_conf 47-99839999718
Q gi|254780465|r 399 KS-SSTPMVTLATA 411 (469)
Q Consensus 399 ~~-~~~p~VvLATA 411 (469)
.. .+..+|++-|-
T Consensus 296 ~~~~~~~Vv~vl~G 309 (323)
T 1v71_A 296 EKLKNKRIGIIISG 309 (323)
T ss_dssp GGGTTCEEEEEECB
T ss_pred HHCCCCCEEEEECC
T ss_conf 87699909999488
No 14
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=99.77 E-value=3.7e-16 Score=130.89 Aligned_cols=262 Identities=17% Similarity=0.153 Sum_probs=180.4
Q ss_pred CCEEEEC-------CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 8604772-------48825466213898120682388899999999731--79820799716654046799986166785
Q gi|254780465|r 88 VTPLIQL-------NANEFLLELFHGPTLSFKDIAMQFIAELMDHILEE--RDHYITIVGATSGDTGAAAIKAFAGKKRI 158 (469)
Q Consensus 88 ~~pl~~l-------~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~--~~~~~~il~ATSGDTGsAa~~a~~~~~~i 158 (469)
.+||.++ +.++|+=-=++-||+||||.++..+ +....++ ..+...|+++|||.+|.|++.+.+ .-++
T Consensus 25 ~TPL~~~~~Ls~~~g~~i~lK~E~~nptGSfK~Rga~~~---l~~~~~~~~~~~~~~vv~aSsGN~g~a~A~~a~-~~g~ 100 (346)
T 3l6b_A 25 LTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNA---VRSLVPDALERKPKAVVTHSSGNHGQALTYAAK-LEGI 100 (346)
T ss_dssp CCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHH---HHTTC-----CCCSCEEEECSSHHHHHHHHHHH-HTTC
T ss_pred CCCEEEHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH---HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH-HHCC
T ss_conf 897737567669879989998358898568199999999---999999787658988999689816999999999-7085
Q ss_pred EEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf 59997357767603321311344787089971796588899999975015431358311345565444011055899999
Q gi|254780465|r 159 NMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSS 238 (469)
Q Consensus 159 ~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~ 238 (469)
++.|+-|.. .++....+|... | ..++.+++.+++|....++....... ...-..-|+.++.+|...-...+
T Consensus 101 ~~~vv~p~~-~~~~k~~~~~~~-G--a~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~G~~t~~~Ei~ 171 (346)
T 3l6b_A 101 PAYIVVPQT-APDCKKLAIQAY-G--ASIVYCEPSDESRENVAKRVTEETEG-----IMVHPNQEPAVIAGQGTIALEVL 171 (346)
T ss_dssp CEEEEEETT-SCHHHHHHHHHT-T--CEEEEECSSHHHHHHHHHHHHHHHTC-----EECCSSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCC-CHHHHHHHHHCC-C--CCEEECCCHHHHHHHCCHHHHHHCCC-----CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 620133343-036777665416-8--74276254056555301014550586-----21578898689866557878999
Q ss_pred HHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE-CCCCCHHHHHHHCCCHHC-CCCCCCCCCCCCCCCHHHH
Q ss_conf 87447788738996346578878866777508987705872-367633567753222010-2345565642001340137
Q gi|254780465|r 239 IALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA-TNENDTLVRMFDMGMYRP-EIVMETTSPAMDIQIPSNF 316 (469)
Q Consensus 239 ~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A-tN~NdiL~rf~~tG~y~~-~~~~~T~SpsMDI~v~SNf 316 (469)
.|+. .+-.+++|+|+-|.+.+.+.+-+..-|--+++.+ ....+.+.+-+..|.... .....|.+..+..+.+.++
T Consensus 172 ~ql~---~~d~vv~~vG~Gg~~~G~~~~~~~~~~~~~vi~ve~~~~~~~~~s~~~g~~~~~~~~~~~~~~g~~~~~~~~~ 248 (346)
T 3l6b_A 172 NQVP---LVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIGLNT 248 (346)
T ss_dssp HHST---TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCSCCCTTH
T ss_pred HHCC---CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8479---9974675126437776766676532887359987216874788887644566424688722343345566542
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHH
Q ss_conf 88999870970899999987520265105520221100012134213889999999999986395983833999999999
Q gi|254780465|r 317 ERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALA 396 (469)
Q Consensus 317 ERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~ 396 (469)
.+++-.+.+ ....|+|+|+..+++.++++.|++++|.+|+++.++.+
T Consensus 249 ~~~~~~~vd---------------------------------~~v~V~d~ea~~a~~~l~~~eGI~vepssaaalAal~~ 295 (346)
T 3l6b_A 249 WPIIRDLVD---------------------------------DIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLS 295 (346)
T ss_dssp HHHHHHHCC---------------------------------EEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHS
T ss_pred HHHHHHHCC---------------------------------EEEEECHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
T ss_conf 388897488---------------------------------49998999999999999997697884889999999999
Q ss_pred HH
Q ss_conf 87
Q gi|254780465|r 397 CR 398 (469)
Q Consensus 397 ~~ 398 (469)
..
T Consensus 296 ~~ 297 (346)
T 3l6b_A 296 QH 297 (346)
T ss_dssp GG
T ss_pred HH
T ss_conf 98
No 15
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=99.75 E-value=7e-17 Score=135.91 Aligned_cols=286 Identities=18% Similarity=0.178 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEC---CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
Q ss_conf 999999998630476678604772---48825466213898120682388899999999731798207997166540467
Q gi|254780465|r 71 KLRDIVNRSYHCFRNAAVTPLIQL---NANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAA 147 (469)
Q Consensus 71 ~l~~ii~~ay~~f~~~~~~pl~~l---~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsA 147 (469)
+...+|++.-. -+||.++ +.+.|+=-=++-||+||||.++..+ +.+..++...+..|++||||++|.|
T Consensus 9 ~~~~~i~~~ig------~TPLi~~~~l~~~i~~K~E~~nptGSfK~Rga~~~---v~~a~~~g~~~~~vv~aSsGN~g~a 79 (303)
T 1o58_A 9 HHHHMMERLIG------STPIVRLDSIDSRIFLKLEKNNPGGSVKDRPALFM---ILDAEKRGLLKNGIVEPTSGNMGIA 79 (303)
T ss_dssp --CCHHHHHSC------CCCEEECTTTCTTEEEEEGGGSTTSBTTHHHHHHH---HHHHHHTTCCTTCEEEECSSHHHHH
T ss_pred HHHHHHHHHCC------CCCEEECCCCCCEEEEEECCCCCCCCCHHHHHHHH---HHHHHHCCCCCCCEEEECCCCHHHH
T ss_conf 37789987618------99818878899779999688997458599999999---9999975999886798089951479
Q ss_pred HHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCC-CCCCHHH
Q ss_conf 999861667855999735776760332131134478708997179658889999997501543135831134-5565444
Q gi|254780465|r 148 AIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGI-NSINWAR 226 (469)
Q Consensus 148 a~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~-NSIN~~R 226 (469)
.+.+.+ .-++++.|+-|.+ +++..+.+|... |-+|..+..+.++++++...+++-.+.. .+.+... |..||
T Consensus 80 ~A~~a~-~~G~~~~i~~p~~-~~~~k~~~l~~~-GA~V~~~~~~~~~~~~~~~a~~~a~~~~---~~~~~~~~~~~~~-- 151 (303)
T 1o58_A 80 IAMIGA-KRGHRVILTMPET-MSVERRKVLKML-GAELVLTPGELGMKGAVEKALEISRETG---AHMLNQFENPYNV-- 151 (303)
T ss_dssp HHHHHH-HHTCCEEEEEETT-SCHHHHHHHHHT-TCEEEEECGGGHHHHHHHHHHHHHHHHC---CBCCCTTTCHHHH--
T ss_pred HHHHHH-HCCCEEECCCCCC-CCHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHHHHHHHCC---CEEECCCCCCCCC--
T ss_conf 999998-7695044378766-729999866516-9779992687401699999999997549---5885787872000--
Q ss_pred CCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHH-HHC-CCCCCEEEEECCCC-CHHHHHHHCCCHHCCCCCCC
Q ss_conf 0110558999998744778873899634657887886677-750-89877058723676-33567753222010234556
Q gi|254780465|r 227 IMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMA-KMM-GLPIEKLIIATNEN-DTLVRMFDMGMYRPEIVMET 303 (469)
Q Consensus 227 il~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~M-GLPI~kli~AtN~N-diL~rf~~tG~y~~~~~~~T 303 (469)
+-.|-.-....+.|+. .++-.+++|.|+-|++.+.+.+ |.+ +..+ +++.+.-.+ +++. .+...+ ...++
T Consensus 152 ~~~~~t~a~Ei~~q~~--~~~d~vv~~vG~Gg~~~Gi~~~lk~~~~~~~-~ii~vep~~s~~~~----~~~~~~-~~~~g 223 (303)
T 1o58_A 152 YSHQFTTGPEILKQMD--YQIDAFVAGVGTGGTISGVGRVLKGFFGNGV-KIVAVEPAKSPVLS----GGQPGK-HAIQG 223 (303)
T ss_dssp HHHHHTHHHHHHHHTT--TCCSEEEEECSSSHHHHHHHHHHHHHHGGGS-EEEEEEETTSCTTT----TCCCCC-CCCTT
T ss_pred HHHHHHHHHHHHHHCC--CCCCEEEEECCCCHHHHHHHHHHHHHCCCCC-EEEEEECCCCCHHH----CCCCCC-CCCCC
T ss_conf 0022216889999708--9989999966801537899999999759998-89999428981520----798688-61456
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEE
Q ss_conf 56420013401378899987097089999998752026510552022110001213421388999999999998639598
Q gi|254780465|r 304 TSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLV 383 (469)
Q Consensus 304 ~SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyii 383 (469)
+.++. +|.+++|-+ -+ ....|+|+|+.+.++.++++.|+++
T Consensus 224 i~~~~---~~~~~~~~~----------------------------------~d--~~v~V~d~e~~~a~~~l~~~~Gi~v 264 (303)
T 1o58_A 224 IGAGF---VPKILDRSV----------------------------------ID--EVITVEDEEAYEMARYLAKKEGLLV 264 (303)
T ss_dssp SCCSS---CCTTCCGGG----------------------------------CC--EEEEECHHHHHHHHHHHHHHHCCCB
T ss_pred CCCCC---CCHHHHHHH----------------------------------CC--EEEEECHHHHHHHHHHHHHHCCCEE
T ss_conf 78885---776665532----------------------------------85--8999899999999999999829999
Q ss_pred CCCHHHHHHHHHHHHH--CCCCCEEEEECCCCCCCHHHH
Q ss_conf 3833999999999874--799839999718843498889
Q gi|254780465|r 384 DPHTAVGIHAALACRK--SSSTPMVTLATAHPSKFPDTV 420 (469)
Q Consensus 384 DPHTAvG~~aa~~~~~--~~~~p~VvLATAHPaKFpe~V 420 (469)
.|.+|+++.+++++.. ..+..+|++.|.|.-|.-+++
T Consensus 265 epssaa~laa~~~~~~~l~~~~~Vv~i~~d~G~kYls~~ 303 (303)
T 1o58_A 265 GISSGANVAAALKVAQKLGPDARVVTVAPDHAERYLSIL 303 (303)
T ss_dssp CHHHHHHHHHHHHHHHTSCTTCCEEEEECBBGGGCTTTC
T ss_pred EHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
T ss_conf 478999999999998772985989999788973132079
No 16
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.69 E-value=3.2e-15 Score=124.39 Aligned_cols=348 Identities=14% Similarity=0.066 Sum_probs=192.6
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCC-------
Q ss_conf 7878632861078889889987709998999999998751578998999999999863047667860477248-------
Q gi|254780465|r 24 ATDGGLYIPKYIPRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQLNA------- 96 (469)
Q Consensus 24 a~DGGL~vP~~~p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~~------- 96 (469)
.+-||.|+||.+... | .|+.....+. + ...+..+..++-+..|-++ ++||.++.+
T Consensus 35 ~~~gg~~~p~~l~~~----~--------~~~~~~~~~~-~----~~~~f~~e~~~~~~~y~gr-PTPL~~a~rLs~~lg~ 96 (422)
T 2o2e_A 35 SGWGGRYVPEALMAV----I--------EEVTAAYQKE-R----VSQDFLDDLDRLQANYAGR-PSPLYEATRLSQHAGS 96 (422)
T ss_dssp ------CCCGGGHHH----H--------HHHHHHHHHH-H----TSTHHHHHHHHHTTTTSSC-SCCEEECGGGGGGTTT
T ss_pred CCCCCCCCCHHHHHH----H--------HHHHHHHHHH-H----CCHHHHHHHHHHHHHCCCC-CCHHEEHHHHHHHCCC
T ss_conf 446771587889999----9--------9999999998-6----5988999999998744899-8754391776875198
Q ss_pred -CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC--CHHH
Q ss_conf -8254662138981206823888999999997317982079971665404679998616678559997357767--6033
Q gi|254780465|r 97 -NEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI--SVVQ 173 (469)
Q Consensus 97 -~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v--S~~Q 173 (469)
+.|+=-=..-||+||||.++-.+.. ..++.++..+|..+++|.+|+|++.+.+ .-++++.|+.|.... +..-
T Consensus 97 a~IylK~E~lnptGS~K~r~a~~~~~----~ak~~G~~~~v~et~aGn~G~a~A~aaa-~~Gl~~~I~m~~~~~~~~~~~ 171 (422)
T 2o2e_A 97 ARIFLKREDLNHTGSHKINNVLGQAL----LARRMGKTRVIAETGAGQHGVATATACA-LLGLDCVIYMGGIDTARQALN 171 (422)
T ss_dssp CEEEEECGGGCCSSTTHHHHHHHHHH----HHHHTTCCEEEEEESSSHHHHHHHHHHH-HHTCEEEEEEEHHHHHHSHHH
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHH----HHHHCCCCCEEECCCCCHHHHHHHHHHH-HCCCCEEEEECCCCHHHHHHH
T ss_conf 47999703686889853779999999----9997699855522254079999999999-869977992067663342899
Q ss_pred HCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHC---CCCCCCCCC-CC--HHHCCCCHHHHHHHHHHHCC--CC
Q ss_conf 213113447870899717965888999999750154313---583113455-65--44401105589999987447--78
Q gi|254780465|r 174 QKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCH---SVNLSGINS-IN--WARIMAQIVYYFVSSIALGS--PN 245 (469)
Q Consensus 174 ~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~---~~~l~s~NS-IN--~~Ril~Q~vyYf~a~~~~~~--~~ 245 (469)
..+|-.. |-. ++.|+++.+.....+.+++.+..-.. .+.+.|+.. .. +--...|.+-...+..|+.. ..
T Consensus 172 v~~m~~~-GAe--Vi~v~~g~~~l~dAi~eA~~~~~~~~~~~~y~~gs~~~p~~~p~~v~~~q~~ig~E~~~Q~~~~~~~ 248 (422)
T 2o2e_A 172 VARMRLL-GAE--VVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRIIGMEARVQIQGQAGR 248 (422)
T ss_dssp HHHHHHT-TCE--EEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHHHHHHHHHHHHHSSS
T ss_pred HHHHHHC-CCE--EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999966-998--9996798875899999999999967343013213203786565344106799999999999986188
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCC-----CHHHHHHHCCCH---H--------CCCCCCCCCCCCC
Q ss_conf 87389963465788788667775089877058723676-----335677532220---1--------0234556564200
Q gi|254780465|r 246 RNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNEN-----DTLVRMFDMGMY---R--------PEIVMETTSPAMD 309 (469)
Q Consensus 246 ~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~N-----diL~rf~~tG~y---~--------~~~~~~T~SpsMD 309 (469)
.+..+++|.|+-||+.+.|.+.+- .|=-++|...-.- +.....+..|.. . ...-..+...+.-
T Consensus 249 ~pd~vva~vGgGs~~~G~~~~f~~-~~~v~ligVEp~g~~~~~~~~~~~~~~g~~g~~~g~~~~~~~~~~g~~~~~~si~ 327 (422)
T 2o2e_A 249 LPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHGSFSYLLQDEDGQTIESHSIS 327 (422)
T ss_dssp CCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC------------------------------------------
T ss_pred CCCEEEECCCCHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCEEEC
T ss_conf 783887578755779999998622-8995399993277754542455465359952012620221012357766633530
Q ss_pred CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHH
Q ss_conf 1340137889998709708999999875202651055202211000-121342138899999999999863959838339
Q gi|254780465|r 310 IQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMS-LSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTA 388 (469)
Q Consensus 310 I~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~-~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTA 388 (469)
++.. .. .+........+ .......|+|+|+.++++.+.+..|++..|-+|
T Consensus 328 ~Gl~--------------~~---------------~~~~~~~~l~~~g~~~~v~VsD~Ea~~a~~~La~~EGIi~~p~sa 378 (422)
T 2o2e_A 328 AGLD--------------YP---------------GVGPEHAWLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIESA 378 (422)
T ss_dssp ------------------------------------------------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred CCCC--------------CC---------------CCCHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCEECCHHH
T ss_conf 4767--------------77---------------742577888745843999989999999999999976997753889
Q ss_pred HHHHHHHHHH--HCCCCCEEEEECCCCCCCHHHHHHHHCCC
Q ss_conf 9999999987--47998399997188434988899980879
Q gi|254780465|r 389 VGIHAALACR--KSSSTPMVTLATAHPSKFPDTVKAASGIV 427 (469)
Q Consensus 389 vG~~aa~~~~--~~~~~p~VvLATAHPaKFpe~V~~Aig~~ 427 (469)
.+++++.+.. ...+..+|++-|.|-.|-.+++.+.+|..
T Consensus 379 ~AlA~aikla~~l~~~~~IVv~lsG~G~kD~~~~~~~~g~~ 419 (422)
T 2o2e_A 379 HAVAGALKLGVELGRGAVIVVNLSGRGDKDVETAAKWFGLL 419 (422)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEECCSCSSSHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCC
T ss_conf 99999999607618879799996888742799999985754
No 17
>1jbq_A Cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=99.69 E-value=3.1e-15 Score=124.45 Aligned_cols=281 Identities=14% Similarity=0.081 Sum_probs=167.3
Q ss_pred CEEEECCC---------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf 60477248---------8254662138981206823888999999997317--982079971665404679998616678
Q gi|254780465|r 89 TPLIQLNA---------NEFLLELFHGPTLSFKDIAMQFIAELMDHILEER--DHYITIVGATSGDTGAAAIKAFAGKKR 157 (469)
Q Consensus 89 ~pl~~l~~---------~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~--~~~~~il~ATSGDTGsAa~~a~~~~~~ 157 (469)
+||.++.. ++|+=-=+.-||+||||.++.. ++..+.+.. .+..+|++||||+||.|.+.+.+ ..+
T Consensus 109 TPLv~l~~Ls~~~G~~~~vylK~E~~nPtGSfKdRga~~---~i~~A~~~G~l~pg~tVieaSSGN~G~AlA~~Aa-~~G 184 (435)
T 1jbq_A 109 TPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLR---MIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAA-VRG 184 (435)
T ss_dssp CCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHH---HHHHHHHHTCSCTTCEEEEECSSHHHHHHHHHHH-HHT
T ss_pred CCEEECCHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH-HHC
T ss_conf 950786503477589977999877889766869999999---9999997498789999999795799999999999-829
Q ss_pred CEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHH
Q ss_conf 55999735776760332131134478708997179658889999997501543135831134556544401105589999
Q gi|254780465|r 158 INMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVS 237 (469)
Q Consensus 158 i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a 237 (469)
+++.|+.|+. +|+.-..+|... |.+|..+..++.|++++..+.....-...........-...++-.+..+..-....
T Consensus 185 ~~~~IvmP~~-~s~~K~~~lr~~-GA~Vi~~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~n~~ag~~t~a~EI 262 (435)
T 1jbq_A 185 YRCIIVMPEK-MSSEKVDVLRAL-GAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEI 262 (435)
T ss_dssp CEEEEEECSC-CCHHHHHHHHHT-TCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHH
T ss_pred CCEEEEECCC-CCHHHHHHHHHC-CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9579995687-628889999844-97799916765310378999999999985368705788887123787752008778
Q ss_pred HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCC-CHHHH
Q ss_conf 98744778873899634657887886677750898770587236763356775322201023455656420013-40137
Q gi|254780465|r 238 SIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQ-IPSNF 316 (469)
Q Consensus 238 ~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~-v~SNf 316 (469)
..|+. +.+-.+++|.|+-|.+.+.+.+-+...|.-++++..-...++..... ..........-..|... .|.+.
T Consensus 263 ~~Ql~--~~~D~vv~~vGtGGt~~Gi~~~lk~~~p~~~ii~v~p~gS~~~~~~~---~~~~~~~~~~i~gi~~~~~p~~~ 337 (435)
T 1jbq_A 263 LQQCD--GKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEE---LNQTEQTTYEVEGIGYDFIPTVL 337 (435)
T ss_dssp HHHHT--TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSSSGG---GGCCSCCCCSCCSCCCSSCCTTC
T ss_pred HHHHC--CCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCC---CCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99728--99998995788873067999999751986479996036750211211---24566655334555567662234
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHH
Q ss_conf 88999870970899999987520265105520221100012134213889999999999986395983833999999999
Q gi|254780465|r 317 ERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALA 396 (469)
Q Consensus 317 ERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~ 396 (469)
.| ..-+ ....|+|+|+...++.+.++.|+++.|.+|++++++.+
T Consensus 338 ~~----------------------------------~~vd--~~v~VsDeea~~a~r~La~~EGi~vepSsgaalAaalk 381 (435)
T 1jbq_A 338 DR----------------------------------TVVD--KWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVK 381 (435)
T ss_dssp CG----------------------------------GGCC--EEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHH
T ss_pred HH----------------------------------HHCC--EEEEECHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH
T ss_conf 27----------------------------------6698--79998999999999999998099781999999999999
Q ss_pred HHH--CCCCCEEEEECCCCCCC
Q ss_conf 874--79983999971884349
Q gi|254780465|r 397 CRK--SSSTPMVTLATAHPSKF 416 (469)
Q Consensus 397 ~~~--~~~~p~VvLATAHPaKF 416 (469)
+.. ..+..+|++-|-+.-|.
T Consensus 382 la~~l~~g~~VVvIl~d~g~~Y 403 (435)
T 1jbq_A 382 AAQELQEGQRCVVILPDSVRNY 403 (435)
T ss_dssp HGGGCCTTCEEEEEECBBGGGG
T ss_pred HHHHCCCCCEEEEEECCCCCCC
T ss_conf 8656189697999977698641
No 18
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA; 1.90A {Geobacillus kaustophilus HTA426}
Probab=99.68 E-value=4.8e-15 Score=123.16 Aligned_cols=275 Identities=16% Similarity=0.179 Sum_probs=171.1
Q ss_pred CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 6047724-------88254662138981206823888999999997317--98207997166540467999861667855
Q gi|254780465|r 89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEER--DHYITIVGATSGDTGAAAIKAFAGKKRIN 159 (469)
Q Consensus 89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~--~~~~~il~ATSGDTGsAa~~a~~~~~~i~ 159 (469)
+||.++. .+.|+=-=++-||+||||.++.. ++....+.. .....|++||||.+|.|.+.+.+ .-+++
T Consensus 15 TPLi~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~---~i~~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~-~~G~~ 90 (308)
T 2egu_A 15 TPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALA---MIEAAEKAGKLKPGDTIVEPTSGNTGIGLAMVAA-AKGYK 90 (308)
T ss_dssp CCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHH---HHHHHHHTTCCCTTCEEEEECCHHHHHHHHHHHH-HHTCE
T ss_pred CCEEECCCCCHHHCCEEEEEECCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH-HCCCC
T ss_conf 9538887445103989999976899756869999999---9999997398678857996088589999999999-74997
Q ss_pred EEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCC-CCCCCHHHCCCCHHHHHHHH
Q ss_conf 99973577676033213113447870899717965888999999750154313583113-45565444011055899999
Q gi|254780465|r 160 MYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSG-INSINWARIMAQIVYYFVSS 238 (469)
Q Consensus 160 v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s-~NSIN~~Ril~Q~vyYf~a~ 238 (469)
+.|+-|.+ +++....||... |..|.......++++|+...+++-.+.. .+.+.. -|..||. ..+..-.....
T Consensus 91 ~~i~vp~~-~~~~k~~~i~~~-GA~V~~~~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~n~~~~~--~~~~~~~~Ei~ 163 (308)
T 2egu_A 91 AVLVMPDT-MSLERRNLLRAY-GAELVLTPGAQGMRGAIAKAEELVREHG---YFMPQQFKNEANPE--IHRLTTGKEIV 163 (308)
T ss_dssp EEEEEESC-SCHHHHHHHHHT-TCEEEEECGGGHHHHHHHHHHHHHHHHC---CBCC----------------CHHHHHH
T ss_pred EEEEECCC-CCHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHHHHHHHCC---CCCCCCCCCHHHHH--HHHHHHHHHHH
T ss_conf 59994699-869999999974-9979984566553899999999987359---57273778756899--99998999999
Q ss_pred HHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 87447788738996346578878866777508987705872367633567753222010234556564200134013788
Q gi|254780465|r 239 IALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFER 318 (469)
Q Consensus 239 ~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfER 318 (469)
.|+. .++-.+++|.|+-|.+.+.+.+-+--.|--+++.+...+..+..... ..+. ..+++..+. +|
T Consensus 164 ~q~~--~~~d~vv~~vG~Gg~~~G~~~~lk~~~~~~~vi~ve~~~~~~~~~~~---~~~~-~~~~i~~~~---~~----- 229 (308)
T 2egu_A 164 EQMG--DQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGK---PGPH-KIQGIGAGF---VP----- 229 (308)
T ss_dssp HHHT--TCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-----------------------------------
T ss_pred HHHC--CCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCC---CCCE-EEECCCCCC---CC-----
T ss_conf 9818--99988883788718899999999973999879998458872530787---5881-661246776---56-----
Q ss_pred HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH-
Q ss_conf 9998709708999999875202651055202211000121342138899999999999863959838339999999998-
Q gi|254780465|r 319 LLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALAC- 397 (469)
Q Consensus 319 llf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~- 397 (469)
..+.. ...-....++|+|..+.++.++++.|.+++|.+|+++.++.++
T Consensus 230 ------------------------------~~~~~-~~~d~~~~v~d~ea~~~~~~l~~~eGi~~epssga~~aa~~~~~ 278 (308)
T 2egu_A 230 ------------------------------DILDT-SIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAALKVA 278 (308)
T ss_dssp ------------------------------CCCCC-CSCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCCC-CCCCEEEEECHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH
T ss_conf ------------------------------32234-55745999778999999999999859698068999999999987
Q ss_pred -HHCCCCCEEEEECCCCCCCHHH
Q ss_conf -7479983999971884349888
Q gi|254780465|r 398 -RKSSSTPMVTLATAHPSKFPDT 419 (469)
Q Consensus 398 -~~~~~~p~VvLATAHPaKFpe~ 419 (469)
+...+..+|++-|.+.-|.-++
T Consensus 279 ~~~~~~~~Vv~i~~g~G~kYlst 301 (308)
T 2egu_A 279 KELGKGKKVLAIIPSNGERYLST 301 (308)
T ss_dssp HHHCTTCEEEEEECBBGGGGTTS
T ss_pred HHHCCCCEEEEEECCCCHHCCCC
T ss_conf 77388697999988897010698
No 19
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=99.64 E-value=1.2e-13 Score=113.36 Aligned_cols=344 Identities=15% Similarity=0.074 Sum_probs=190.2
Q ss_pred CCCCCCCCCCC-CCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECC--------
Q ss_conf 87863286107-888988998770999899999999875157899899999999986304766786047724--------
Q gi|254780465|r 25 TDGGLYIPKYI-PRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQLN-------- 95 (469)
Q Consensus 25 ~DGGL~vP~~~-p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~-------- 95 (469)
.-||-||||.+ |.| ++|.. .|.++-.. .-|. .+|.+++.+ |-. .++||.++.
T Consensus 5 ~~~~~~~~~~l~~~l--~~l~~----~~~~~~~~--~~f~------~~~~~~~~~-y~g----rpTPL~~~~~Ls~~lgg 65 (388)
T 1v8z_A 5 EFGGQYVPETLIEPL--KELEK----AYKRFKDD--EEFN------RQLNYYLKT-WAG----RPTPLYYAKRLTEKIGG 65 (388)
T ss_dssp TEECCCCCHHHHHHH--HHHHH----HHHHHHTC--HHHH------HHHHHHHHH-TTC----CSCCEEECHHHHHHHTS
T ss_pred CCCCEECCHHHHHHH--HHHHH----HHHHHHCC--HHHH------HHHHHHHHH-CCC----CCCCCEEHHHHHHHCCC
T ss_conf 829884879899999--99999----99999649--8999------999998751-489----99704175877876289
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCC--HHH
Q ss_conf 882546621389812068238889999999973179820799716654046799986166785599973577676--033
Q gi|254780465|r 96 ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRIS--VVQ 173 (469)
Q Consensus 96 ~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS--~~Q 173 (469)
.+.|+=-=+.-||+||||.++..+.. .+++.++...|.++|+|.+|+|++.+.+ .-++++.|+-|..... ..+
T Consensus 66 ~~IylK~E~lnptGS~K~R~a~~~i~----~A~~~G~~~~v~~tsaGn~g~a~A~aaa-~~g~~~~i~m~~~~~~~~~~~ 140 (388)
T 1v8z_A 66 AKIYLKREDLVHGGAHKTNNAIGQAL----LAKFMGKTRLIAETGAGQHGVATAMAGA-LLGMKVDIYMGAEDVERQKMN 140 (388)
T ss_dssp SEEEEEEGGGSTTSBTHHHHHHHHHH----HHHHTTCCEEEEEESSSHHHHHHHHHHH-HTTCEEEEEEEHHHHTTCHHH
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHH----HHHHCCCCCEEEEECCCHHHHHHHHHHH-HCCCCCEECCCCCHHHHHHHH
T ss_conf 75999978888888753769999999----9997599856753152068999999999-729872002333336555789
Q ss_pred HCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHC---CCCCCC-CCCCCHH--HCCCCHHHHHHHHHHHCC--CC
Q ss_conf 213113447870899717965888999999750154313---583113-4556544--401105589999987447--78
Q gi|254780465|r 174 QKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCH---SVNLSG-INSINWA--RIMAQIVYYFVSSIALGS--PN 245 (469)
Q Consensus 174 ~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~---~~~l~s-~NSIN~~--Ril~Q~vyYf~a~~~~~~--~~ 245 (469)
..+|-.. |- .++.|.+..+++...+.+...+..-.. .....+ ++.-++. -...|.+--.....|+.. ..
T Consensus 141 v~~~~~~-GA--~V~~v~~g~~tl~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~q~~ig~Ei~~Q~~~~~g~ 217 (388)
T 1v8z_A 141 VFRMKLL-GA--NVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQ 217 (388)
T ss_dssp HHHHHHT-TC--EEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHC-CC--EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999976-98--18995688542899999999999974776530355335888642666525589899999999996399
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEC--CCC---CHHHHHHHCCC---HHC----------CCCCCCCCCC
Q ss_conf 87389963465788788667775089877058723--676---33567753222---010----------2345565642
Q gi|254780465|r 246 RNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIAT--NEN---DTLVRMFDMGM---YRP----------EIVMETTSPA 307 (469)
Q Consensus 246 ~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~At--N~N---diL~rf~~tG~---y~~----------~~~~~T~Sps 307 (469)
.+-.+++|.|+-||+.+.+.++..--.+ ++|... -.. ....--+..|. ... ....+|.+.+
T Consensus 218 ~pD~vv~~vGgG~~~~G~~~~f~~~~~v-~~igve~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 296 (388)
T 1v8z_A 218 LPDVIVACVGGGSNAMGIFYPFVNDKKV-KLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIA 296 (388)
T ss_dssp CCSEEEEECSSSHHHHHHHGGGTTCTTS-EEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSS
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
T ss_conf 9978997788717889999987308984-699995577764206666664058754445532035448777517874333
Q ss_pred CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCH
Q ss_conf 00134013788999870970899999987520265105520221100012134213889999999999986395983833
Q gi|254780465|r 308 MDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHT 387 (469)
Q Consensus 308 MDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHT 387 (469)
-.+..+..-.... .+.+. + .-....|+|+|++++++.+.+..|++..|-+
T Consensus 297 ~~l~~~~~g~~~~------------~~~~~----~--------------~~~~~~VtD~Ea~~a~~~La~~EGI~~~~es 346 (388)
T 1v8z_A 297 PGLDYPGVGPEHA------------YLKKI----Q--------------RAEYVTVTDEEALKAFHELSRTEGIIPALES 346 (388)
T ss_dssp TTSCCSBCCHHHH------------HHHHT----T--------------SEEEEEEEHHHHHHHHHHHHHHHSCCBCHHH
T ss_pred CCCCCCCCCHHHH------------HHHHC----C--------------CEEEEEECHHHHHHHHHHHHHHCCCEECCHH
T ss_conf 4445576537889------------99864----8--------------6389998999999999999997699657789
Q ss_pred HHHHHHHHHHHHC--CCCCEEEEECCCCCCCHHHHHHHHCC
Q ss_conf 9999999998747--99839999718843498889998087
Q gi|254780465|r 388 AVGIHAALACRKS--SSTPMVTLATAHPSKFPDTVKAASGI 426 (469)
Q Consensus 388 AvG~~aa~~~~~~--~~~p~VvLATAHPaKFpe~V~~Aig~ 426 (469)
|.+++++.+.... ++..+|++-|.|--|-.++|.+.+|.
T Consensus 347 a~Ala~a~~la~~l~~~~~VVv~lsG~G~kD~~~~~~~~g~ 387 (388)
T 1v8z_A 347 AHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDIVLKVSGN 387 (388)
T ss_dssp HHHHHHHHHHHHTSCTTCEEEEEECBBSGGGHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 99999999986770987979999688855019999997379
No 20
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus HB8}
Probab=99.64 E-value=2.4e-13 Score=111.40 Aligned_cols=346 Identities=13% Similarity=0.010 Sum_probs=189.4
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECC--------
Q ss_conf 787863286107888988998770999899999999875157899899999999986304766786047724--------
Q gi|254780465|r 24 ATDGGLYIPKYIPRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQLN-------- 95 (469)
Q Consensus 24 a~DGGL~vP~~~p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~-------- 95 (469)
..-||-||||.+-. ..++| .....+..-+.+| .++|+.+..+ |.. .++||.++.
T Consensus 31 ~~~gg~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~f-~~~~~~~~~~-~~g----rPTPL~~a~rLs~~lgg 92 (418)
T 1x1q_A 31 GPYGGRYVPETLIP-ALEEL-----------EAAYREAKKDPAF-LEELDHYLRQ-FAG----RPTPLYHAKRLSEYWGG 92 (418)
T ss_dssp TTEECCCCCTTTHH-HHHHH-----------HHHHHHHHHCHHH-HHHHHHHHHH-TTC----CSCCEEECHHHHHHHTS
T ss_pred CCCCCEECCHHHHH-HHHHH-----------HHHHHHHHCCHHH-HHHHHHHHHH-CCC----CCCCCEEHHHHHHHCCC
T ss_conf 88399968398999-99999-----------9999999669899-9999999875-389----99733483766976289
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC--CHHH
Q ss_conf 88254662138981206823888999999997317982079971665404679998616678559997357767--6033
Q gi|254780465|r 96 ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI--SVVQ 173 (469)
Q Consensus 96 ~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v--S~~Q 173 (469)
.+.|+=-=+.-||+||||.++..+.. .+++.+++.+|.++|+|.+|.|.+.+.+ .-++++.|+.|..-. ....
T Consensus 93 ~~IylKrEdlnptGS~K~r~a~~~il----~Ak~~Gk~~~Iaet~aGnhG~a~A~aaa-~~Gl~c~i~m~~~~~~~~~~n 167 (418)
T 1x1q_A 93 AQVFLKREDLLHTGAHKINNTLGQAL----LARRMGKRRVIAETGAGQHGVSVATVAA-LFGLECVVYMGEEDVRRQALN 167 (418)
T ss_dssp SEEEEEEGGGSGGGBTTHHHHHHHHH----HHHHHTCCEEEEECSSSHHHHHHHHHHH-HHTCEEEEEEEHHHHHTCHHH
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHH----HHHHCCCCCEEEECCCCHHHHHHHHHHH-HCCCCEEEECCCCHHHHHHHH
T ss_conf 76999863588877642179999999----9987589847883074479999999999-849865871367617665668
Q ss_pred HCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHH------HHHHHHCCC--C
Q ss_conf 21311344787089971796588899999975015431358311345565444011055899------999874477--8
Q gi|254780465|r 174 QKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYF------VSSIALGSP--N 245 (469)
Q Consensus 174 ~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf------~a~~~~~~~--~ 245 (469)
..+|... |.. ++.|....+.....+.+...|+.-.........+|.+-..-.|++|-.| ....|+.+. .
T Consensus 168 v~~~~~l-Ga~--vv~v~~g~~tl~da~~ea~~~~~~~~~~~~~~~g~~~~p~~~~~~v~~~~~~ig~E~~~Q~~e~~g~ 244 (418)
T 1x1q_A 168 VFRMKLL-GAE--VRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGR 244 (418)
T ss_dssp HHHHHHT-TCE--EEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHHHHHHHHHHHHHHSS
T ss_pred HHHHHHC-CCE--EEEECCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 9999960-965--8982577543789999999999857554143046356887532230563064999998899998099
Q ss_pred CCEEEEEECCCHHHHHHHHHHHH-CCCCCCEEEEEC-----CCCCHHHHHHHCCCHHC-----------C--CCCC--CC
Q ss_conf 87389963465788788667775-089877058723-----67633567753222010-----------2--3455--65
Q gi|254780465|r 246 RNISFSVPTGNFGDIFAGYMAKM-MGLPIEKLIIAT-----NENDTLVRMFDMGMYRP-----------E--IVME--TT 304 (469)
Q Consensus 246 ~~i~f~VPtGNfGni~Ag~~Ak~-MGLPI~kli~At-----N~NdiL~rf~~tG~y~~-----------~--~~~~--T~ 304 (469)
.+-.+++|.|+-||+.+.|...+ ..=|.-++|... -..+....-+..|.-.. . .... |+
T Consensus 245 ~pD~vv~~vGgGs~~~G~~~~f~~~~d~~v~liGVEa~G~g~~~~~~a~~~~~G~~~v~~g~~s~~~~~~~g~~~~~~si 324 (418)
T 1x1q_A 245 LPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHSV 324 (418)
T ss_dssp CCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEEEEBCCC-----------
T ss_pred CCCEEEEECCCCCCCCCEEEHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCCCEE
T ss_conf 88738993268654120100222146666159999607887773045668866997765203321311468774434121
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEC
Q ss_conf 64200134013788999870970899999987520265105520221100012134213889999999999986395983
Q gi|254780465|r 305 SPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVD 384 (469)
Q Consensus 305 SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiD 384 (469)
|.-.|-... ..|-. .+.+ ...-...+|+|+|+++.++.+.+..|++..
T Consensus 325 s~Gl~~~~v-g~~~~-------------~l~~------------------~~~~~~v~VtDeEa~~a~~~Lar~EGIi~~ 372 (418)
T 1x1q_A 325 SAGLDYPGV-GPEHS-------------YYAD------------------AGVAEYASVTDEEALEGFKLLARLEGIIPA 372 (418)
T ss_dssp -----CSBC-CHHHH-------------HHHH------------------HTSEEEEEECHHHHHHHHHHHHHHHSCCBC
T ss_pred CCCCCCCCC-CHHHH-------------HHHH------------------CCCEEEEEECHHHHHHHHHHHHHHCCCEEC
T ss_conf 366567885-37889-------------9985------------------787089998999999999999997799665
Q ss_pred CCHHHHHHHHHHHHH--CCCCCEEEEECCCCCCCHHHHHHHHCCC
Q ss_conf 833999999999874--7998399997188434988899980879
Q gi|254780465|r 385 PHTAVGIHAALACRK--SSSTPMVTLATAHPSKFPDTVKAASGIV 427 (469)
Q Consensus 385 PHTAvG~~aa~~~~~--~~~~p~VvLATAHPaKFpe~V~~Aig~~ 427 (469)
|-+|.+++++.+... ..+..+|+.-|.|-.|-+++|.+.+|.+
T Consensus 373 lesa~AvA~a~kla~~l~~~~~VVv~lsG~G~KD~~~v~~~lg~~ 417 (418)
T 1x1q_A 373 LESAHAIAYAAKVVPEMDKDQVVVINLSGRGDKDVTEVMRLLGGE 417 (418)
T ss_dssp HHHHHHHHHHHHHTTTSCTTCEEEEEECBBGGGTHHHHHHTCCC-
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCC
T ss_conf 668999999999757718999699996889600599999986578
No 21
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=99.62 E-value=3.3e-14 Score=117.41 Aligned_cols=352 Identities=13% Similarity=0.079 Sum_probs=183.8
Q ss_pred HHCCCC-CCCCCCCCCCC-CCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECC-
Q ss_conf 861567-87863286107-888988998770999899999999875157899899999999986304766786047724-
Q gi|254780465|r 19 ILSGLA-TDGGLYIPKYI-PRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQLN- 95 (469)
Q Consensus 19 ~~~Gla-~DGGL~vP~~~-p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~- 95 (469)
+++|.= .-||-||||.+ |.| ++|.. .|.++ .-+.+|- ++++.+..+ |-. ..+||.++.
T Consensus 3 ~~~~~~~~~~~~~~pe~l~~~~--~~l~~----~~~~~-------~~~~~f~-~~~~~~~~~-~~g----rpTPL~~~~~ 63 (396)
T 1qop_B 3 LLNPYFGEFGGMYVPQILMPAL--NQLEE----AFVSA-------QKDPEFQ-AQFADLLKN-YAG----RPTALTKCQN 63 (396)
T ss_dssp SSCCEETTEEEEESCGGGHHHH--HHHHH----HHHHH-------HTCHHHH-HHHHHHHHH-TTC----CSCCEEECHH
T ss_pred CCCCCCCCCCCEECCHHHHHHH--HHHHH----HHHHH-------HCCHHHH-HHHHHHHHH-CCC----CCCHHHEHHH
T ss_conf 7778656838994868889999--99999----99999-------6198999-999999874-489----9966766485
Q ss_pred ------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf ------88254662138981206823888999999997317982079971665404679998616678559997357767
Q gi|254780465|r 96 ------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI 169 (469)
Q Consensus 96 ------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v 169 (469)
.+.|+=-=+.-||+||||.++-.+. ..+++.++...|+++|||.+|.|.+.+.+ .-+++++|+-|..-.
T Consensus 64 Ls~~~G~~IylK~E~lnptGS~KdR~a~~~i----~~A~~~G~~~~vve~saGN~G~a~A~aaa-~~Gl~~~I~mp~~~~ 138 (396)
T 1qop_B 64 ITAGTRTTLYLKREDLLHGGAHKTNQVLGQA----LLAKRMGKSEIIAETGAGQHGVASALASA-LLGLKCRIYMGAKDV 138 (396)
T ss_dssp HHTTSSEEEEEEEGGGSTTSBTHHHHHHHHH----HHHHHTTCCEEEEEESSSHHHHHHHHHHH-HHTCEEEEEEEHHHH
T ss_pred HHHHHCCEEEEEECCCCCCCCCCHHHHHHHH----HHHHHCCCCCEEEECCCCHHHHHHHHHHH-HHCCCEEEEECCCCH
T ss_conf 5564688799997678888874164899999----99998699835730360069999999998-605745998425546
Q ss_pred --CHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHH------CCCCHHHHHHHHHHH
Q ss_conf --603321311344787089971796588899999975015431358311345565444------011055899999874
Q gi|254780465|r 170 --SVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWAR------IMAQIVYYFVSSIAL 241 (469)
Q Consensus 170 --S~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~R------il~Q~vyYf~a~~~~ 241 (469)
+.....+|-.. |-. ++.|...-+....-+.+...|..-.........+|....- ..+|.+.--.+..|+
T Consensus 139 ~~~~~kv~~mk~~-GAe--V~~V~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~e~~~q~ 215 (396)
T 1qop_B 139 ERQSPNVFRMRLM-GAE--VIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQI 215 (396)
T ss_dssp HHCHHHHHHHHHT-TCE--EEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCE--EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 5659999999974-976--9983688631455599999998863688998742534678762110245546524289999
Q ss_pred C--CCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE--------CCCCCHHHHHHHCCCHHC----------CCCC
Q ss_conf 4--7788738996346578878866777508987705872--------367633567753222010----------2345
Q gi|254780465|r 242 G--SPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA--------TNENDTLVRMFDMGMYRP----------EIVM 301 (469)
Q Consensus 242 ~--~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A--------tN~NdiL~rf~~tG~y~~----------~~~~ 301 (469)
. ....+-.+++|+|.-||+.+.|.+.+. .+--+++.. +..+......-..|.... ....
T Consensus 216 ~~~~g~~pD~vv~~vGgG~~~~G~~~~~~~-~~~~~~ig~~~~~~g~~~~~~~a~~~~g~~g~~~~~~~~~~~~~~g~~~ 294 (396)
T 1qop_B 216 LDKEGRLPDAVIACVGGGSNAIGMFADFIN-DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIE 294 (396)
T ss_dssp HHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBC
T ss_pred HHHHCCCCCEEEEEECCCCCHHHEEHHHCC-CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
T ss_conf 998199787689831676402310000123-6643210226612135666655420258643334445640103787756
Q ss_pred CCCCCCCCCCCHHH-HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 56564200134013-78899987097089999998752026510552022110001213421388999999999998639
Q gi|254780465|r 302 ETTSPAMDIQIPSN-FERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSN 380 (469)
Q Consensus 302 ~T~SpsMDI~v~SN-fERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~g 380 (469)
.+.|.+..+..+.- -+...++-. + ......|+|+|++++++.+.+..|
T Consensus 295 ~~~s~~~gl~~~g~~~~~~~l~~~-----------------~--------------~~~~~~VtD~Eal~a~~~Lar~EG 343 (396)
T 1qop_B 295 ESYSISAGLDFPSVGPQHAYLNSI-----------------G--------------RADYVSITDDEALEAFKTLCRHEG 343 (396)
T ss_dssp CCCCSSGGGCCSSCCHHHHHHHHT-----------------T--------------SSEEEEEEHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHCCCCCCCCHHHHHHHHC-----------------C--------------CEEEEEECHHHHHHHHHHHHHHCC
T ss_conf 777501101357752567999862-----------------8--------------649999899999999999999579
Q ss_pred CEECCCHHHHHHHHHHHH-HC--CCCCEEEEECCCCCCCHHHHHHHHCCCCC
Q ss_conf 598383399999999987-47--99839999718843498889998087988
Q gi|254780465|r 381 YLVDPHTAVGIHAALACR-KS--SSTPMVTLATAHPSKFPDTVKAASGIVPD 429 (469)
Q Consensus 381 yiiDPHTAvG~~aa~~~~-~~--~~~p~VvLATAHPaKFpe~V~~Aig~~~~ 429 (469)
++..|-+|.+++++.+.- .. .+..+|+.-|-|--|-.+++.+.+..+-+
T Consensus 344 I~~~~esa~Ava~A~k~a~~~~~~~~~VVv~lsG~G~kD~~~~~~~l~~~g~ 395 (396)
T 1qop_B 344 IIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDILKARGE 395 (396)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHHHHHHC-----
T ss_pred CEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC
T ss_conf 8316717999999999864537999989999688973479999999986588
No 22
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=99.61 E-value=2.1e-13 Score=111.85 Aligned_cols=279 Identities=14% Similarity=0.051 Sum_probs=166.2
Q ss_pred CEEEECC-----CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHCCCCCCEEE
Q ss_conf 6047724-----88254662138981206823888999999997317--9820799716654046799986166785599
Q gi|254780465|r 89 TPLIQLN-----ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEER--DHYITIVGATSGDTGAAAIKAFAGKKRINMY 161 (469)
Q Consensus 89 ~pl~~l~-----~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~--~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~ 161 (469)
+||.++. .+.|+=-=++-||+||||.+..- ++...++.. .+...|+++|||.+|.|++.+.+ .-++++.
T Consensus 14 TPL~~l~~l~~~~~i~lK~E~~nptGSfK~RgA~~---~i~~a~~~g~~~~~~~vv~~SsGN~g~alA~~a~-~~G~~~~ 89 (316)
T 1y7l_A 14 TPLVRLKHFGHNGNVVVKIEGRNPSYSVKCRIGAN---MVWQAEKDGTLTKGKEIVDATSGNTGIALAYVAA-ARGYKIT 89 (316)
T ss_dssp CCEEECSSSSSTTCEEEEETTSSGGGBTHHHHHHH---HHHHHHHTTSSCTTCEEEESCCSHHHHHHHHHHH-HHTCCEE
T ss_pred CCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH-HHCCCEE
T ss_conf 95488886799988999875679757869999999---9999997399889999999687389999999999-7199728
Q ss_pred EECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCC-CCHHHHHHHHHH
Q ss_conf 9735776760332131134478708997179658889999997501543135831134556544401-105589999987
Q gi|254780465|r 162 ILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIM-AQIVYYFVSSIA 240 (469)
Q Consensus 162 vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril-~Q~vyYf~a~~~ 240 (469)
|.-|.+ ++.....+|... | ..++.+++++|++...-+......+.... ....-..-|+..+. .|. +...+
T Consensus 90 iv~p~~-~~~~k~~~~~~~-G--a~vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~E 160 (316)
T 1y7l_A 90 LTMPET-MSLERKRLLCGL-G--VNLVLTEGAKGMKGAIAKAEEIVASDPSR-YVMLKQFENPANPQIHRE----TTGPE 160 (316)
T ss_dssp EEEETT-SCHHHHHHHHHT-T--CEEEEECGGGHHHHHHHHHHHHHHHCTTT-EECCCTTTCTHHHHHHHH----THHHH
T ss_pred EECCCC-CCHHHHHHHHHH-C--CCEEECCCCCCCCHHHHHHHHHHHHCCCC-CCCCCCCCCHHHHHHHHH----HHHHH
T ss_conf 856745-798999999961-9--95673267656411688888888742576-657766677778999999----99999
Q ss_pred HCCC--CCCEEEEEECCCHHHHHHHHHHHH-CCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCC-CCHHHH
Q ss_conf 4477--887389963465788788667775-089877058723676335677532220102345565642001-340137
Q gi|254780465|r 241 LGSP--NRNISFSVPTGNFGDIFAGYMAKM-MGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDI-QIPSNF 316 (469)
Q Consensus 241 ~~~~--~~~i~f~VPtGNfGni~Ag~~Ak~-MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI-~v~SNf 316 (469)
+.+. ..+-.+++|.|+-|.+.+.+.+-+ ..-|--+++.+.=.+-.+......|.... ..++...++-. .+|.++
T Consensus 161 i~~q~~~~~D~iv~~vG~Gg~~~G~~~~lk~~~~~~v~~v~vep~~~~~~~~~~~~~~~~--~~~~~~~gig~~~~~~~l 238 (316)
T 1y7l_A 161 IWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVK--PGPHKIQGIGAGFIPKNL 238 (316)
T ss_dssp HHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHHHHHHTCCCC--CCCCSCTTSCCSSCCTTC
T ss_pred HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCC--CCCCEEEECCCCCCCHHH
T ss_conf 998549998889952577426899999998752898069998337860433320388567--788024204755477877
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHH
Q ss_conf 88999870970899999987520265105520221100012134213889999999999986395983833999999999
Q gi|254780465|r 317 ERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALA 396 (469)
Q Consensus 317 ERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~ 396 (469)
.| . . .-....++|+|+.+..+.++++.|.++.|-+|+++.++++
T Consensus 239 ~~------------------------------~----~--~~~~~~v~d~ea~~a~~~l~~~eGi~~epssaaa~aaa~~ 282 (316)
T 1y7l_A 239 DL------------------------------S----I--IDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADR 282 (316)
T ss_dssp CG------------------------------G----G--CCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHH
T ss_pred HH------------------------------H----H--CCEEEEECHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
T ss_conf 65------------------------------4----0--6703652899999999999998399992889999999999
Q ss_pred HHH---CCCCCEEEEECCCCCCCHH
Q ss_conf 874---7998399997188434988
Q gi|254780465|r 397 CRK---SSSTPMVTLATAHPSKFPD 418 (469)
Q Consensus 397 ~~~---~~~~p~VvLATAHPaKFpe 418 (469)
+.. ..+..+|++.|-|..|.-+
T Consensus 283 la~~~~~~~~~vV~il~d~g~kY~~ 307 (316)
T 1y7l_A 283 LAKLPEFADKLIVVILPSASERYLS 307 (316)
T ss_dssp HHTSGGGTTCEEEEEECBBCSSCCC
T ss_pred HHHHCCCCCCEEEEEECCCCCCCCC
T ss_conf 9710658979799997679700058
No 23
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, enzyme kinetics, X-RAY diffraction; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=99.60 E-value=4.8e-13 Score=109.31 Aligned_cols=267 Identities=15% Similarity=0.137 Sum_probs=156.9
Q ss_pred CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 6047724-------88254662138981206823888999999997317--98207997166540467999861667855
Q gi|254780465|r 89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEER--DHYITIVGATSGDTGAAAIKAFAGKKRIN 159 (469)
Q Consensus 89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~--~~~~~il~ATSGDTGsAa~~a~~~~~~i~ 159 (469)
+||.++. .+.|+=-=+.-||+||||.++..+ +.++++.. .....|+++|||.+|.|++.+.+ .-+++
T Consensus 11 TPL~~~~~Ls~~~g~~v~lK~E~~nptGSfK~Rga~~~---i~~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~-~~G~~ 86 (303)
T 2v03_A 11 TPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSM---IVEAEKRGEIKPGDVLIEATSGNTGIALAMIAA-LKGYR 86 (303)
T ss_dssp CCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHH---HHHHHHTTCCCTTCEEEEECSSHHHHHHHHHHH-HHTCE
T ss_pred CCEEECCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHH---HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH-HCCCC
T ss_conf 96798763475569999999678898778699999999---999997399888977998078609999999999-83996
Q ss_pred EEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 99973577676033213113447870899717965888999999750154313583113455654440110558999998
Q gi|254780465|r 160 MYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 160 v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
+.|+-|.+ +++....+|... |..|..+..+..+++++....+....... .......|..|+ +-.|..-...-.-
T Consensus 87 ~~i~~p~~-~~~~k~~~i~~~-Ga~v~~v~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~a~EI~~ 160 (303)
T 2v03_A 87 MKLLMPDN-MSQERRAAMRAY-GAELILVTKEQGMEGARDLALEMANRGEG--KLLDQFNNPDNP--YAHYTTTGPEIWQ 160 (303)
T ss_dssp EEEEEETT-SCHHHHHHHHHT-TCEEEEECTTTHHHHHHHHHHHHHHTTSC--EECCTTTCTHHH--HHHHHTHHHHHHH
T ss_pred EEEECCCC-CCHHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHCCCCC--CCCCCCCCCCHH--HHHHHHHHHHHHH
T ss_conf 59967997-306653048761-99730220255516799999875314555--456776551215--7888999998799
Q ss_pred HHCCCCCCEEEEEECCCHHHHHHHHHHHH-CCCCCCEEEEECC-CCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 74477887389963465788788667775-0898770587236-763356775322201023455656420013401378
Q gi|254780465|r 240 ALGSPNRNISFSVPTGNFGDIFAGYMAKM-MGLPIEKLIIATN-ENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFE 317 (469)
Q Consensus 240 ~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~-MGLPI~kli~AtN-~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfE 317 (469)
|+. +++..+++|.|+-|.+.+.+.+.+ ++-++ +++...- ....++.. +...... .+.++.
T Consensus 161 q~~--~~~d~~v~~~G~gG~~~G~~~~~~~~~~~~-~i~~vep~~~~~~~~~--------~~~~~~~-------~~~~~~ 222 (303)
T 2v03_A 161 QTG--GRITHFVSSMGTTGTITGVSRFMREQSKPV-TIVGLQPEEGSSIPGI--------RRWPTEY-------LPGIFN 222 (303)
T ss_dssp HTT--TCCCEEEEECSSSHHHHHHHHHHHTSSSCC-EEEEEEECTTCCCTTC--------CCCCGGG-------CCTTCC
T ss_pred HCC--CCCCEEEEECCCCHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCC--------CCCCCCC-------CCCCCC
T ss_conf 709--988879994898458899999999869998-8999955999864553--------4555566-------666444
Q ss_pred HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH
Q ss_conf 89998709708999999875202651055202211000121342138899999999999863959838339999999998
Q gi|254780465|r 318 RLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALAC 397 (469)
Q Consensus 318 Rllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~ 397 (469)
+ .. .-....++|+|..+.++.+.++.|.+++|.+|+++.++.++
T Consensus 223 ~----------------------------------~~--~~~~~~v~d~ea~~a~~~l~~~eGi~vepSsgaalaa~~k~ 266 (303)
T 2v03_A 223 A----------------------------------SL--VDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRV 266 (303)
T ss_dssp G----------------------------------GG--CSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred C----------------------------------CC--CCEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHH
T ss_conf 5----------------------------------11--23899977899999999999971949837799999999999
Q ss_pred HH-CCCCCEEEEECCCCCCCHHH
Q ss_conf 74-79983999971884349888
Q gi|254780465|r 398 RK-SSSTPMVTLATAHPSKFPDT 419 (469)
Q Consensus 398 ~~-~~~~p~VvLATAHPaKFpe~ 419 (469)
.. .++..+|++.|.+.-|..++
T Consensus 267 ~~~~~~~~VV~v~~d~G~kyl~t 289 (303)
T 2v03_A 267 AAANPDAVVVAIICDRGDRYLST 289 (303)
T ss_dssp HHHSTTCEEEEEECBBSGGGGGG
T ss_pred HHHCCCCEEEEEECCCCCCCCCC
T ss_conf 98886883999989997222788
No 24
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=99.57 E-value=8.9e-13 Score=107.44 Aligned_cols=273 Identities=16% Similarity=0.076 Sum_probs=163.0
Q ss_pred CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC----CCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf 6047724-------88254662138981206823888999999997317----982079971665404679998616678
Q gi|254780465|r 89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEER----DHYITIVGATSGDTGAAAIKAFAGKKR 157 (469)
Q Consensus 89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~----~~~~~il~ATSGDTGsAa~~a~~~~~~ 157 (469)
+||.++. .+.|+=-=++-||+||||.++..+ +....++. ++...|+++|||.+|.|++.+.+ .-+
T Consensus 10 TPL~~~~~L~~~~g~~i~lK~E~~nptGSfK~Rga~~~---i~~a~~~g~~~~~~~~~vv~~SsGN~g~a~A~~a~-~~g 85 (304)
T 1ve1_A 10 TPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYM---IKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAA-SRG 85 (304)
T ss_dssp CCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHH---HHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHHH-HHT
T ss_pred CCEEECCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHH---HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH-HCC
T ss_conf 96388711142139889999678997678299999999---99999828977887778999478735789999999-839
Q ss_pred CEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCC-CHHHHHH
Q ss_conf 559997357767603321311344787089971796588899999975015431358311345565444011-0558999
Q gi|254780465|r 158 INMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMA-QIVYYFV 236 (469)
Q Consensus 158 i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~-Q~vyYf~ 236 (469)
+++.|+.|.+ +++..+.+|... +.++..+...++++++.....+...+.. .+.+ ...-|..++++ |-.....
T Consensus 86 ~~~~iv~p~~-~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~n~~~~~~~~~t~~~E 158 (304)
T 1ve1_A 86 YRLILTMPAQ-MSEERKRVLKAF-GAELVLTDPERRMLAAREEALRLKEELG---AFMP--DQFKNPANVRAHYETTGPE 158 (304)
T ss_dssp CEEEEEEETT-CCHHHHHHHHHT-TCEEEEECTTTHHHHHHHHHHHHHHHHT---CBCC--CTTTCHHHHHHHHHTHHHH
T ss_pred CCEEEECCCC-CCHHHHHHHHHH-CCCEEECCCCCCHHHHHHHHHHHHHCCC---CEEC--CCCCCHHHHHHHHHHHHHH
T ss_conf 8647741332-458888888752-3330211223324789999997643158---5006--7765406599998999999
Q ss_pred HHHHHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEE-CCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHH
Q ss_conf 998744778873899634657887886677-7508987705872-36763356775322201023455656420013401
Q gi|254780465|r 237 SSIALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIA-TNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPS 314 (469)
Q Consensus 237 a~~~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~A-tN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~S 314 (469)
.+-|+. .++-.+++|.|+-|.+.+.+.+ +.++-.+ +++.. ......++.-+. .....+++.+...
T Consensus 159 i~eq~~--~~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~-~vigve~~~~~~~~~~~~-----~~~~~~~~~~~~~----- 225 (304)
T 1ve1_A 159 LYEALE--GRIDAFVYGSGTGGTITGVGRYLKERIPHV-KVIAVEPARSNVLSGGKM-----GQHGFQGMGPGFI----- 225 (304)
T ss_dssp HHHHTT--TCCSEEEEECSSSHHHHHHHHHHHTTCTTC-EEEEEEEGGGCTTTTCCC-----CCCSCTTSCCSSC-----
T ss_pred HHHHCC--CCCCEEEECCCCCHHHHHHHHHHHHCCCCC-EEEEEECCCCCCCCCCCC-----CCCCCCCCCCCCC-----
T ss_conf 999649--998889965788077889999997549998-899991489830347763-----6755555578867-----
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHH
Q ss_conf 37889998709708999999875202651055202211000121342138899999999999863959838339999999
Q gi|254780465|r 315 NFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAA 394 (469)
Q Consensus 315 NfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa 394 (469)
+...... ..-....++|+|..+.++.++++.|.+++|.+++++.++
T Consensus 226 --------------------------------~~~~~~~--~~~~~~~v~d~~a~~~~~~l~~~egi~vepssgaa~aaa 271 (304)
T 1ve1_A 226 --------------------------------PENLDLS--LLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAA 271 (304)
T ss_dssp --------------------------------CTTCCGG--GCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred --------------------------------CCHHHHC--CCCEEEEECHHHHHHHHHHHHHHCCCEEECHHHHHHHHH
T ss_conf --------------------------------7112100--364468747699999999999976979966199999999
Q ss_pred HHH--HHCCCCCEEEEECCCCCCCHHH
Q ss_conf 998--7479983999971884349888
Q gi|254780465|r 395 LAC--RKSSSTPMVTLATAHPSKFPDT 419 (469)
Q Consensus 395 ~~~--~~~~~~p~VvLATAHPaKFpe~ 419 (469)
.+. +...+..+|++.|.|.-|..++
T Consensus 272 ~~~~~~~~~~~~Vv~i~~g~G~kYl~t 298 (304)
T 1ve1_A 272 LQVARELGPGKRVACISPDGGWKYLST 298 (304)
T ss_dssp HHHHHHHCTTCEEEEEECBBSGGGTTS
T ss_pred HHHHHHHCCCCEEEEEECCCCHHHCCC
T ss_conf 998687686792999978897121686
No 25
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica hm-1} PDB: 3bm5_A*
Probab=99.53 E-value=1.8e-12 Score=105.38 Aligned_cols=275 Identities=17% Similarity=0.109 Sum_probs=162.5
Q ss_pred CEEEECC---C--------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf 6047724---8--------82546621389812068238889999999973179--820799716654046799986166
Q gi|254780465|r 89 TPLIQLN---A--------NEFLLELFHGPTLSFKDIAMQFIAELMDHILEERD--HYITIVGATSGDTGAAAIKAFAGK 155 (469)
Q Consensus 89 ~pl~~l~---~--------~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~--~~~~il~ATSGDTGsAa~~a~~~~ 155 (469)
+||.++. + +.|+=-=++-||+||||.++.. ++..+++... ...+|++||||.+|.|.+.+.+ .
T Consensus 24 TPLi~l~~l~~~~~~~~g~~iy~K~E~~nPtGSfKdR~A~~---~i~~a~~~g~~~~g~~vv~aSsGN~g~alA~~a~-~ 99 (343)
T 2pqm_A 24 TPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFN---IVYQAIKDGRLKPGMEIIESTSGNTGIALCQAGA-V 99 (343)
T ss_dssp CCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHH---HHHHHHHHTSSCTTCEEEEECSSHHHHHHHHHHH-H
T ss_pred CCCEECCCCCCHHCCCCCCEEEEEECCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH-H
T ss_conf 95068633240118777988999966889877789999999---9999996485589978999467526899999999-8
Q ss_pred CCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHH
Q ss_conf 78559997357767603321311344787089971796588899999975015431358311345565444011055899
Q gi|254780465|r 156 KRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYF 235 (469)
Q Consensus 156 ~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf 235 (469)
.++++.|+-|.. +|+....+|..... .++.+++..|+.....+..-...+- ....+..-..-|+.++.+|-.-..
T Consensus 100 ~g~~~~iv~p~~-~~~~k~~~l~~~GA---~v~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~g~~ti~~ 174 (343)
T 2pqm_A 100 FGYRVNIAMPST-MSVERQMIMKAFGA---ELILTEGKKGMPGAIEEVNKMIKEN-PGKYFVANQFGNPDNTAAHHYTAN 174 (343)
T ss_dssp HTCCEEEEEETT-SCHHHHHHHHHTTC---EEEEECGGGHHHHHHHHHHHHHHHS-TTTEEECCTTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCH-HHHHHHHHCCCCCC---CCCCCCCCCCCCHHHHHHHHHCCCC-CCCEEECCCCCCHHHHHHHHHHHH
T ss_conf 099732467601-13667530113575---5222456677407899887621468-981796576776568999999999
Q ss_pred HHHHHHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECCCC-CHHHHHHHCCCHHCCCCCCCCCCCCCCCCH
Q ss_conf 9998744778873899634657887886677-75089877058723676-335677532220102345565642001340
Q gi|254780465|r 236 VSSIALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATNEN-DTLVRMFDMGMYRPEIVMETTSPAMDIQIP 313 (469)
Q Consensus 236 ~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN~N-diL~rf~~tG~y~~~~~~~T~SpsMDI~v~ 313 (469)
...-|+. +++-.+++|.|+-|++.+-+.+ +.++-.+ +++.+.-.. ..+ .|.......+....++. +|
T Consensus 175 EI~eql~--~~~D~vv~~vG~Gg~~~Gi~~~l~~~~~~~-~v~~vep~~~~~~-----~~~~~~~~~i~~~g~~~---~~ 243 (343)
T 2pqm_A 175 EIWEDTD--GEVDIVVSAVGTSGTVIGVAEKLKEKKKGI-KIIAVEPEESAVL-----EGKAKGPHGIQGIGAGF---IP 243 (343)
T ss_dssp HHHHHTT--TCEEEEEEECSSSHHHHHHHHHHHHHCTTC-EEEEEEEGGGCTT-----TTCCCCCCCCTTCCCSS---CC
T ss_pred HHHHHCC--CCCCEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEECCCCCCCC-----CCCCCCCCEECCCCCCC---CC
T ss_conf 9999759--998889958888713899999999878876-0687646886201-----47887897623778986---62
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHH
Q ss_conf 13788999870970899999987520265105520221100012134213889999999999986395983833999999
Q gi|254780465|r 314 SNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHA 393 (469)
Q Consensus 314 SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~a 393 (469)
.++.+ .. .-....|+|+|...+++.++++.|+++-|-+++++.|
T Consensus 244 ~~~~~----------------------------------~~--~~~~~~Vsd~ea~~a~~~l~~~eGi~~g~ssgaa~~a 287 (343)
T 2pqm_A 244 DIYKK----------------------------------EF--VDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILA 287 (343)
T ss_dssp TTCCG----------------------------------GG--CCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHH
T ss_pred HHHHH----------------------------------HH--CCCEEEECHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
T ss_conf 88875----------------------------------30--6730477689999999999998098982788999999
Q ss_pred HHHHH---HCCCCCEEEEECCCCCCCHHH
Q ss_conf 99987---479983999971884349888
Q gi|254780465|r 394 ALACR---KSSSTPMVTLATAHPSKFPDT 419 (469)
Q Consensus 394 a~~~~---~~~~~p~VvLATAHPaKFpe~ 419 (469)
+.+.- ..++..+|++.|-+.-|.-++
T Consensus 288 a~~~~~~~~~~~~~VV~il~d~G~kY~st 316 (343)
T 2pqm_A 288 GLKEAEKPENEGKTIVIIVPSCGERYLST 316 (343)
T ss_dssp HHHHHTSGGGTTCEEEEEECBBGGGGTTS
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCC
T ss_conf 99996030189697999976798422588
No 26
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=99.53 E-value=9.8e-13 Score=107.14 Aligned_cols=275 Identities=15% Similarity=0.103 Sum_probs=159.6
Q ss_pred CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC---CCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 6047724-------88254662138981206823888999999997317---9820799716654046799986166785
Q gi|254780465|r 89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEER---DHYITIVGATSGDTGAAAIKAFAGKKRI 158 (469)
Q Consensus 89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~---~~~~~il~ATSGDTGsAa~~a~~~~~~i 158 (469)
+||.++. .+.|+=-=+..||+||||.++..+ +....+.. .....|+++|||.+|.|++.+.+ .-++
T Consensus 16 TPLv~~~~l~~~~g~~iy~K~E~~nPtGS~KdR~A~~~---i~~a~~~G~l~~~~~~vv~~SsGN~g~a~A~~a~-~~G~ 91 (322)
T 1z7w_A 16 TPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSM---ISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAA-AKGY 91 (322)
T ss_dssp CCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHH---HHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHH-HHTC
T ss_pred CCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH---HHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH-HCCC
T ss_conf 98588887654569889999767898678089999999---9999974885679838998488759999999999-7399
Q ss_pred EEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCC-CCCCCCCCHHHCCCCHHHHHHH
Q ss_conf 599973577676033213113447870899717965888999999750154313583-1134556544401105589999
Q gi|254780465|r 159 NMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVN-LSGINSINWARIMAQIVYYFVS 237 (469)
Q Consensus 159 ~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~-l~s~NSIN~~Ril~Q~vyYf~a 237 (469)
.+.+.-|.+ ++.....+|-.. |..|......+..++.-....++....+ ..+. -.-.|..|| +..|-.-...-
T Consensus 92 ~~~iv~p~~-~~~~k~~~~~~~-Ga~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~n~~n~--~~~~~t~g~EI 165 (322)
T 1z7w_A 92 KLIITMPAS-MSTERRIILLAF-GVELVLTDPAKGMKGAIAKAEEILAKTP--NGYMLQQFENPANP--KIHYETTGPEI 165 (322)
T ss_dssp EEEEEEETT-SCHHHHHHHHHT-TCEEEEECGGGHHHHHHHHHHHHHHHCT--TEEECCTTTCTHHH--HHHHHTHHHHH
T ss_pred CEEEECCCC-CCHHHHHHHHCC-CCCEEEECCCCCCCHHHHHHHHHHHCCC--CCCCCCCCCCHHHH--HHHHHHHHHHH
T ss_conf 769856888-886764233317-8606874156775301578999874079--97258899984378--99998899999
Q ss_pred HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 98744778873899634657887886677750898770587236763356775322201023455656420013401378
Q gi|254780465|r 238 SIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFE 317 (469)
Q Consensus 238 ~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfE 317 (469)
+.|+. +++-.+++|.|.-|++.+.+.+-+---|--+++.+.-.+... +..+...+.. .+.+.++. +|.++.
T Consensus 166 ~~q~~--~~~d~vv~~vG~Gg~~~Gi~~~lk~~~~~~~iv~ve~~~s~~---~~~~~~~~~~-i~gig~~~---~p~~~~ 236 (322)
T 1z7w_A 166 WKGTG--GKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAI---LSGGKPGPHK-IQGIGAGF---IPSVLN 236 (322)
T ss_dssp HHHTT--TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCG---GGTCCCCCCS-CTTSCCSS---CCTTCC
T ss_pred HHHCC--CCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCC---CCCCCCCCCE-ECCCCCCC---CCCCCC
T ss_conf 98658--998878846677723578999887608987899981288850---3689888734-24668874---671202
Q ss_pred HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH
Q ss_conf 89998709708999999875202651055202211000121342138899999999999863959838339999999998
Q gi|254780465|r 318 RLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALAC 397 (469)
Q Consensus 318 Rllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~ 397 (469)
+ +.+. ...+|+|+|..+.++.+.++.|.++-|-++.++.++.++
T Consensus 237 ~------------------------------~~~D------~vv~V~d~ea~~a~~~La~~eGi~vgpSsg~a~aaa~kl 280 (322)
T 1z7w_A 237 V------------------------------DLID------EVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKL 280 (322)
T ss_dssp G------------------------------GGCS------EEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHH
T ss_pred C------------------------------CCCC------EEEEECHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH
T ss_conf 4------------------------------4462------699978799999999999964978965431334889999
Q ss_pred HH---CCCCCEEEEECCCCCCCHH
Q ss_conf 74---7998399997188434988
Q gi|254780465|r 398 RK---SSSTPMVTLATAHPSKFPD 418 (469)
Q Consensus 398 ~~---~~~~p~VvLATAHPaKFpe 418 (469)
-. ..+..+|++-|-|..|.-+
T Consensus 281 a~~~~~~g~~iV~vl~D~G~kYls 304 (322)
T 1z7w_A 281 AQRPENAGKLFVAIFPSFGERYLS 304 (322)
T ss_dssp HTSGGGTTCEEEEEECBBGGGGTT
T ss_pred HHHCCCCCCEEEEEECCCCCCCCC
T ss_conf 841217998799998899611167
No 27
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis H37RV} PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=99.53 E-value=5.3e-12 Score=102.07 Aligned_cols=267 Identities=16% Similarity=0.121 Sum_probs=156.8
Q ss_pred CCEEEECCC--------------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHH
Q ss_conf 860477248--------------8254662138981206823888999999997317--982079971665404679998
Q gi|254780465|r 88 VTPLIQLNA--------------NEFLLELFHGPTLSFKDIAMQFIAELMDHILEER--DHYITIVGATSGDTGAAAIKA 151 (469)
Q Consensus 88 ~~pl~~l~~--------------~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~--~~~~~il~ATSGDTGsAa~~a 151 (469)
-+||.++.. +.|+=-=++-||+||||.++.. ++...+++. ....+|+++|||.+|.|++.+
T Consensus 15 ~TPLi~l~~l~~~~~~~~~~~~~~i~~K~E~~nPtGSfK~Rga~~---~i~~a~~~g~~~~~~~vv~~SsGN~g~a~A~~ 91 (325)
T 3dwg_A 15 NTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVR---MIEQAEADGLLRPGATILEPTSGNTGISLAMA 91 (325)
T ss_dssp CCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHH---HHHHHHHTTCCCTTCEEEEECSSHHHHHHHHH
T ss_pred CCCEEECCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHH
T ss_conf 998068854261223444687868999866899757849999999---99999975985799889994899779999999
Q ss_pred HCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCH
Q ss_conf 61667855999735776760332131134478708997179658889999997501543135831134556544401105
Q gi|254780465|r 152 FAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQI 231 (469)
Q Consensus 152 ~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~ 231 (469)
.+ .-++++.|+-|.+ +|+..+.+|-.. |-+ ++.+++.+++.....+..- ..-.........+.-|...+..+.
T Consensus 92 a~-~~g~~~~iv~p~~-~~~~k~~~~~~~-Ga~--vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 164 (325)
T 3dwg_A 92 AR-LKGYRLICVMPEN-TSVERRQLLELY-GAQ--IIFSAAEGGSNTAVATAKE--LAATNPSWVMLYQYGNPANTDSHY 164 (325)
T ss_dssp HH-HHTCEEEEEEESS-SCHHHHHHHHHH-TCE--EEEECSTTTHHHHHHHHHH--HHHHCTTSBCCCTTTCHHHHHHHH
T ss_pred HH-HCCCCEEEECCCC-CCHHHHHHHHHC-CCC--EEECCCCCCCHHHHHHHHH--HHCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99-8699669965775-669999999862-771--3312654332268999998--740389875367877711466664
Q ss_pred HHHHHHHHHHC-CCCCCEEEEEECCCHHHHHHHH-HHHHCCCCCCEEEEECCCCC-HHHHHHHCCCHHCCCCCCCCCCCC
Q ss_conf 58999998744-7788738996346578878866-77750898770587236763-356775322201023455656420
Q gi|254780465|r 232 VYYFVSSIALG-SPNRNISFSVPTGNFGDIFAGY-MAKMMGLPIEKLIIATNEND-TLVRMFDMGMYRPEIVMETTSPAM 308 (469)
Q Consensus 232 vyYf~a~~~~~-~~~~~i~f~VPtGNfGni~Ag~-~Ak~MGLPI~kli~AtN~Nd-iL~rf~~tG~y~~~~~~~T~SpsM 308 (469)
. ....++. +.+++..+++|.|.-|.+.+.+ .-|..+-.+ +++.+.-... ..+. .+.....+
T Consensus 165 ~---~~~~ei~eq~~~~D~vv~~vG~GG~~~Gi~~~lk~~~~~~-~vv~Vep~~~~~~~~------------~~~~~~~~ 228 (325)
T 3dwg_A 165 C---GTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANV-KIVAAEPRYGEGVYA------------LRNMDEGF 228 (325)
T ss_dssp H---THHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTC-EEEEEEEECCGGGGC------------CSSGGGCC
T ss_pred H---HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCC------------CCCCCCCC
T ss_conf 5---6999999866998869998683888999999899759998-899978888876444------------02357887
Q ss_pred CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHH
Q ss_conf 01340137889998709708999999875202651055202211000121342138899999999999863959838339
Q gi|254780465|r 309 DIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTA 388 (469)
Q Consensus 309 DI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTA 388 (469)
++.+ +..+. .-....|+|+|+.+.++.++++.|.++.|-++
T Consensus 229 ---~~~~------------------------------~~~~~------id~~~~V~d~ea~~~~~~l~~~eGi~vepSsg 269 (325)
T 3dwg_A 229 ---VPEL------------------------------YDPEI------LTARYSVGAVDAVRRTRELVHTEGIFAGISTG 269 (325)
T ss_dssp ---CCTT------------------------------CCGGG------CSEEEEEEHHHHHHHHHHHHHHHCCCBCHHHH
T ss_pred ---CCCC------------------------------CCCCC------EEEEEEECHHHHHHHHHHHHHHCCCEEEECHH
T ss_conf ---7654------------------------------46632------00247878999999999999976908962389
Q ss_pred HHHHHHHHHH-----HCCCCCEEEEECCCCCCCHHH
Q ss_conf 9999999987-----479983999971884349888
Q gi|254780465|r 389 VGIHAALACR-----KSSSTPMVTLATAHPSKFPDT 419 (469)
Q Consensus 389 vG~~aa~~~~-----~~~~~p~VvLATAHPaKFpe~ 419 (469)
.++.++.+.. ...+..+|++.|-+.-|..++
T Consensus 270 a~laaa~~l~~~~~~~~~~~~VV~v~~d~G~kY~st 305 (325)
T 3dwg_A 270 AVLHAALGVGAGALAAGERADIALVVADAGWKYLST 305 (325)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEECBBGGGGGGG
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 999999999987887499981899987898333681
No 28
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix K1} SCOP: c.79.1.1
Probab=99.52 E-value=5.9e-12 Score=101.77 Aligned_cols=321 Identities=14% Similarity=0.132 Sum_probs=179.2
Q ss_pred HHHHHHCCCCHHHHHHHHHHHH----CCCCC-CHHHHHHHHH----------------HHHHHCC---------------
Q ss_conf 8998770999899999999875----15789-9899999999----------------9863047---------------
Q gi|254780465|r 41 KEIKDLRGLSYQEIALFIFRLF----IGQEI-KSSKLRDIVN----------------RSYHCFR--------------- 84 (469)
Q Consensus 41 ~~~~~~~~~sy~e~a~~il~~f----~~~~i-~~~~l~~ii~----------------~ay~~f~--------------- 84 (469)
+.+...++.||-|.|-+||+-= ++.-- .++..+.+-- +...+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (389)
T 1wkv_A 11 DVLDSVRGFSYLENAREVLRSGEARCLGNPRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGEMVFPSPLDF 90 (389)
T ss_dssp THHHHCCSSTTHHHHHHHHHHTEEECBSSGGGCHHHHHHHHHHTCSEEEBSSSCEEETTTTTTTCCCSCTTCEESSHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCHHHH
T ss_conf 77776324279999999986035030579975478999999844554556766420167617310489753442799998
Q ss_pred --CCCCCEEEECCC------CCEEEEECCCCCC-CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf --667860477248------8254662138981-2068238889999999973179820799716654046799986166
Q gi|254780465|r 85 --NAAVTPLIQLNA------NEFLLELFHGPTL-SFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGK 155 (469)
Q Consensus 85 --~~~~~pl~~l~~------~~~vlELfHGPT~-aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~ 155 (469)
+.-++||.++.. +.|+=-=++.||. ||||.++..+ +....++..+..+|++||||.||.|.+.+.+ .
T Consensus 91 ~~~~~pTPLirl~~~~~~G~~Iy~KlE~~NPtGgSfKdR~A~~~---I~~A~~~~~~g~tVveaSSGN~G~AlA~~aa-~ 166 (389)
T 1wkv_A 91 FERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEI---ISRLSRRVEKGSLVADATSSNFGVALSAVAR-L 166 (389)
T ss_dssp HHHSCSCCEEECCCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHH---HHHHTTTSCTTCEEEEECCHHHHHHHHHHHH-H
T ss_pred HCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH---HHHHHHHCCCCCEEEEECCCHHHHHHHHHHH-H
T ss_conf 46899998777877888898999985478999876099999999---9999860799999998584099999999999-8
Q ss_pred CCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCC-CCCCCHHHCCCCHHHH
Q ss_conf 785599973577676033213113447870899717965888999999750154313583113-4556544401105589
Q gi|254780465|r 156 KRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSG-INSINWARIMAQIVYY 234 (469)
Q Consensus 156 ~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s-~NSIN~~Ril~Q~vyY 234 (469)
.++++.|+-|.+ +|+..+.+|... |-.|....-..+.+++..-..+...+. .-+.+.. -|-.||- ..|....
T Consensus 167 ~Gik~~IvmP~~-~s~~k~~~lra~-GAeVi~~p~~~~~~~~~~ra~~~a~~~---~~~~~~q~~N~~n~~--~h~~ttg 239 (389)
T 1wkv_A 167 YGYRARVYLPGA-AEEFGKLLPRLL-GAQVIVDPEAPSTVHLLPRVMKDSKNE---GFVHVNQFYNDANFE--AHMRGTA 239 (389)
T ss_dssp TTCEEEEEEETT-SCHHHHHHHHHT-TCEEEEETTCSSSGGGHHHHHHHHHHH---CCEECCTTTCHHHHH--HHHHTHH
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHC-CCCEEECCCCCCHHHHHHHHHHHHHHC---CCCCCCCCCCCCCHH--HHHHHHH
T ss_conf 199689996360-254899999856-985586586532578999999986503---775455566850044--4420299
Q ss_pred HHHHHHHCCCCCCE-EEEEECCCHHHHHHHHH-HHHCCCCCCEEEEECCCC-CHHHHHHHCCCHHCCCCCCCCCCCCCCC
Q ss_conf 99998744778873-89963465788788667-775089877058723676-3356775322201023455656420013
Q gi|254780465|r 235 FVSSIALGSPNRNI-SFSVPTGNFGDIFAGYM-AKMMGLPIEKLIIATNEN-DTLVRMFDMGMYRPEIVMETTSPAMDIQ 311 (469)
Q Consensus 235 f~a~~~~~~~~~~i-~f~VPtGNfGni~Ag~~-Ak~MGLPI~kli~AtN~N-diL~rf~~tG~y~~~~~~~T~SpsMDI~ 311 (469)
..-+.|+...+..+ .+++|.|.-|.+.+.+. .|.++-.+ |+|...-.+ +.+ +.. -.|+
T Consensus 240 ~EI~eQl~~~g~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~v-kiVgVeP~~~~~i---------------~g~---~~i~ 300 (389)
T 1wkv_A 240 REIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSI-RAVLVQPAQGDSI---------------PGI---RRVE 300 (389)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTC-EEEEEEECTTCCC---------------TTC---CCGG
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHECCCCC-EEEEEECCCCCCC---------------CCC---CCCC
T ss_conf 99999845579844799982699710888646451108998-7999974777537---------------886---2245
Q ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHH
Q ss_conf 40137889998709708999999875202651055202211000121342138899999999999863959838339999
Q gi|254780465|r 312 IPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGI 391 (469)
Q Consensus 312 v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~ 391 (469)
.+-.+..+ +.....-..|+|+|..++++.+.++.|+++-|-++.++
T Consensus 301 ~g~~~~~~----------------------------------~d~~d~v~~VsdeEAi~a~r~La~~EGI~vGpSSGAal 346 (389)
T 1wkv_A 301 TGMLWINM----------------------------------LDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAV 346 (389)
T ss_dssp GCCSHHHH----------------------------------SCCCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHH
T ss_pred CCCCCCCC----------------------------------CCCCEEEEEECHHHHHHHHHHHHHHHCCEEEHHHHHHH
T ss_conf 68767654----------------------------------76442999989999999999999980988809999999
Q ss_pred HHHHHHHHCC---CCCEEEEECCCCCCCHHHHHHHHC
Q ss_conf 9999987479---983999971884349888999808
Q gi|254780465|r 392 HAALACRKSS---STPMVTLATAHPSKFPDTVKAASG 425 (469)
Q Consensus 392 ~aa~~~~~~~---~~p~VvLATAHPaKFpe~V~~Aig 425 (469)
.++.+..... ...+|++-+-+.-|.-+++..++.
T Consensus 347 aaa~kla~~~~~~~~~vVvIl~D~G~rYlst~~n~~~ 383 (389)
T 1wkv_A 347 KALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE 383 (389)
T ss_dssp HHHHHHHHTTCSCSEEEEEEECBBGGGCHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9999998621689898999987897441777632330
No 29
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii OT3} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=99.50 E-value=6.6e-12 Score=101.39 Aligned_cols=275 Identities=13% Similarity=0.105 Sum_probs=149.7
Q ss_pred CCCEEEECC-------CCCEE-EE-ECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf 786047724-------88254-66-2138981206823888999999997317982079971665404679998616678
Q gi|254780465|r 87 AVTPLIQLN-------ANEFL-LE-LFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKR 157 (469)
Q Consensus 87 ~~~pl~~l~-------~~~~v-lE-LfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~ 157 (469)
-.+||.++. .++|+ +| |.|=||+||||.++..+ +.+.+++..+.+++.++++|.+|.|.+.+.+ .-+
T Consensus 20 ~~TPL~~~~~l~~~~g~~i~~K~Edl~~~~tGS~K~R~a~~~---i~~a~~~g~~~~~~~~~s~gN~~~a~A~~a~-~~g 95 (325)
T 1j0a_A 20 WETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYL---LGDALSKGADVVITVGAVHSNHAFVTGLAAK-KLG 95 (325)
T ss_dssp SCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHH---HHHHHHTTCSEEEEECCTTCHHHHHHHHHHH-HTT
T ss_pred CCCCEEEHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHH---HHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-HCC
T ss_conf 988376867767987998999841579998661599999999---9999977998679983176579999999997-457
Q ss_pred CEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCC-CCCCCCCCHHHCCCCHHHHHH
Q ss_conf 5599973577676033213113447870899717965888999999750154313583-113455654440110558999
Q gi|254780465|r 158 INMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVN-LSGINSINWARIMAQIVYYFV 236 (469)
Q Consensus 158 i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~-l~s~NSIN~~Ril~Q~vyYf~ 236 (469)
+++.++.|..- +..+..+|....+..+..+......+ .....+++........... ...-..-|+.++.++......
T Consensus 96 ~~~~i~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~E 173 (325)
T 1j0a_A 96 LDAILVLRGKE-ELKGNYLLDKIMGIETRVYDAKDSFE-LMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGE 173 (325)
T ss_dssp CEEEEEEESCC-CSCHHHHHHHHTTCEEEEESCCSTTT-HHHHHHHHHHHHTTSSCCEEEECGGGCSHHHHTHHHHHHHH
T ss_pred CCEEEEECCCC-CHHHHHHHHHHHCCEEEEECCCCCCC-HHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHH
T ss_conf 83599705876-07689999986288179983675430-24899999999985248847935787764224443337999
Q ss_pred HHHHHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHH
Q ss_conf 998744778873899634657887886677-7508987705872367633567753222010234556564200134013
Q gi|254780465|r 237 SSIALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSN 315 (469)
Q Consensus 237 a~~~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SN 315 (469)
...|.. ..+-.+++|.|.-|.+.+.+.+ +.++..+ +++...-.+ ++++. .+.
T Consensus 174 i~~q~~--~~~d~vv~~~G~Gg~~~G~~~~~~~~~~~~-~i~~v~~~~---------------------~~~~~---~~~ 226 (325)
T 1j0a_A 174 IATQSE--VKFDSIVVAAGSGGTLAGLSLGLSILNEDI-RPVGIAVGR---------------------FGEVM---TSK 226 (325)
T ss_dssp HHHHCC--CCCSEEEEEESSSHHHHHHHHHHHHTTCCC-EEEEEECSS---------------------CSSSH---HHH
T ss_pred HHHHHH--CCCCCEEEECCCCHHHHHHHHHHHHHCCCC-EEEEEEECC---------------------HHHHH---HHH
T ss_conf 999875--037710210267468999999999759997-499996245---------------------07654---344
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHH-HHCCCCCCCCCHHHHHHHHHHHHHHCCCEECC-CHHHHHHH
Q ss_conf 78899987097089999998752026510552022110-00121342138899999999999863959838-33999999
Q gi|254780465|r 316 FERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQK-MSLSFSAKRASMEDVNSVIKSVLEKSNYLVDP-HTAVGIHA 393 (469)
Q Consensus 316 fERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~-l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDP-HTAvG~~a 393 (469)
..+.. ...... ..+....+.. ....+....++|+|+.++++.+.++.|.++|| .||.++.+
T Consensus 227 ~~~~~-----------~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~e~~~a~~~l~~~eGi~~eP~~sg~a~a~ 289 (325)
T 1j0a_A 227 LDNLI-----------KEAAEL------LGVKVEVRPELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYG 289 (325)
T ss_dssp HHHHH-----------HHHHHH------TTCCCCSCCEEEECSTTSTTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHH
T ss_pred HHCCC-----------CCCCCC------CCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 31431-----------332235------7877553132220221237787799999999999980975780058999999
Q ss_pred HHHHHHC--CCCCEEEEECC
Q ss_conf 9998747--99839999718
Q gi|254780465|r 394 ALACRKS--SSTPMVTLATA 411 (469)
Q Consensus 394 a~~~~~~--~~~p~VvLATA 411 (469)
+.++... .+.++|++-|-
T Consensus 290 l~~~~~~~~~g~~Vv~i~tG 309 (325)
T 1j0a_A 290 LVDLARKGELGEKILFIHTG 309 (325)
T ss_dssp HHHHHHTTCSCSEEEEEECC
T ss_pred HHHHHHCCCCCCCEEEEECC
T ss_conf 99999707998919999899
No 30
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A*
Probab=99.50 E-value=8.9e-12 Score=100.52 Aligned_cols=275 Identities=16% Similarity=0.132 Sum_probs=159.4
Q ss_pred CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 6047724-------88254662138981206823888999999997317--98207997166540467999861667855
Q gi|254780465|r 89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEER--DHYITIVGATSGDTGAAAIKAFAGKKRIN 159 (469)
Q Consensus 89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~--~~~~~il~ATSGDTGsAa~~a~~~~~~i~ 159 (469)
+||.++. .+.|+=-=+.-||+||||.++- .++.+..+.. .+...|++||||.+|.|.+.+.+ .-+++
T Consensus 17 TPL~~~~~l~~~~g~~iy~K~E~~~ptGSfK~Rga~---~~l~~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~-~~G~~ 92 (313)
T 2q3b_A 17 TPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGV---AMLQAAEQAGLIKPDTIILEPTSGNTGIALAMVCA-ARGYR 92 (313)
T ss_dssp CCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHH---HHHHHHHHTTCCCTTCEEEEECSSHHHHHHHHHHH-HHTCE
T ss_pred CCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHH---HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH-HCCCC
T ss_conf 943887544403298899996789977897899999---99999997599667977998178558899999999-81998
Q ss_pred EEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCC-CCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf 99973577676033213113447870899717965888999999750154313583-11345565444011055899999
Q gi|254780465|r 160 MYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVN-LSGINSINWARIMAQIVYYFVSS 238 (469)
Q Consensus 160 v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~-l~s~NSIN~~Ril~Q~vyYf~a~ 238 (469)
+.|+-|.. +++.-..||... |.. ++.+.+..++.+...+..-.......... ....|..|+ +..|........
T Consensus 93 ~~iv~p~~-~~~~k~~~~~~~-Ga~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~t~a~Ei~ 166 (313)
T 2q3b_A 93 CVLTMPET-MSLERRMLLRAY-GAE--LILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANP--AIHRVTTAEEVW 166 (313)
T ss_dssp EEEEEETT-SCHHHHHHHHHT-TCE--EEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHH--HHHHHTHHHHHH
T ss_pred CEEECCCC-CCHHHHHHHHHC-CCC--CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH--HHHHHHHHHHHH
T ss_conf 44523665-889999999841-155--422223455167899998741001364125688871469--998877999999
Q ss_pred HHHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 8744778873899634657887886677-750898770587236763356775322201023455656420013401378
Q gi|254780465|r 239 IALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFE 317 (469)
Q Consensus 239 ~~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfE 317 (469)
-|+. +++-.+++|.|+-|.+.+-+.+ |.++ |--|++...-++-. ++..+...+.. .++++... ++.+
T Consensus 167 ~q~~--~~~D~iv~~vG~Gg~~~Gi~~~lk~~~-~~~~iigVep~~s~---~~~~~~~~~~~-v~gi~~~~---~~~~-- 234 (313)
T 2q3b_A 167 RDTD--GKVDIVVAGVGTGGTITGVAQVIKERK-PSARFVAVEPAASP---VLSGGQKGPHP-IQGIGAGF---VPPV-- 234 (313)
T ss_dssp HHTT--TCCCEEEEECSSSHHHHHHHHHHHHHC-TTCEEEEEEETTSC---TTTTCCCCCCC-CTTSCCSS---CCTT--
T ss_pred HHCC--CCCCEEEECCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCCC---HHCCCCCCCCC-CCCCCCCC---CCHH--
T ss_conf 8559--999989978887187999999999729-99889998789872---11067748940-44257887---6433--
Q ss_pred HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH
Q ss_conf 89998709708999999875202651055202211000121342138899999999999863959838339999999998
Q gi|254780465|r 318 RLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALAC 397 (469)
Q Consensus 318 Rllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~ 397 (469)
+ ....-+ ....++|+|..+.++.+.++.|.++.|.++.++.++.++
T Consensus 235 ----------------------------~----~~~~vd--~~~~v~d~e~~~~~~~l~~~eGi~~~~ssga~~~aal~~ 280 (313)
T 2q3b_A 235 ----------------------------L----DQDLVD--EIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQV 280 (313)
T ss_dssp ----------------------------C----CGGGCC--EEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHH
T ss_pred ----------------------------H----CHHHCC--EEEECCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHH
T ss_conf ----------------------------3----323362--788689899999999999975909935299999999999
Q ss_pred HH---CCCCCEEEEECCCCCCCHHH
Q ss_conf 74---79983999971884349888
Q gi|254780465|r 398 RK---SSSTPMVTLATAHPSKFPDT 419 (469)
Q Consensus 398 ~~---~~~~p~VvLATAHPaKFpe~ 419 (469)
.. ..+..+|++-|-+..|.-++
T Consensus 281 ~~~~~~~~~~VV~il~d~G~kY~~t 305 (313)
T 2q3b_A 281 ARRPENAGKLIVVVLPDFGERYLST 305 (313)
T ss_dssp HTCGGGTTCEEEEEECBBSGGGC--
T ss_pred HHHCCCCCCEEEEEECCCCHHHCCH
T ss_conf 6044489796999977997021585
No 31
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, structure, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=99.43 E-value=6.3e-12 Score=101.53 Aligned_cols=283 Identities=10% Similarity=-0.035 Sum_probs=155.4
Q ss_pred CCCEEEECC---------CCCEEEEECCCCCCCC---CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC
Q ss_conf 786047724---------8825466213898120---6823888999999997317982079971665404679998616
Q gi|254780465|r 87 AVTPLIQLN---------ANEFLLELFHGPTLSF---KDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAG 154 (469)
Q Consensus 87 ~~~pl~~l~---------~~~~vlELfHGPT~aF---KD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~ 154 (469)
..+||.++. -++|+--=.+-||+|| ||+++.. ++.+.++...+++.+.++++|++|.|++.+.+
T Consensus 14 g~TPl~~~~~Ls~~~g~~~~iy~K~E~~~p~gSf~g~K~R~~~~---~l~~a~~~g~~~~~~~~~s~gN~g~A~A~~aa- 89 (338)
T 1tzj_A 14 GPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEY---LIPEALAQGCDTLVSIGGIQSNQTRQVAAVAA- 89 (338)
T ss_dssp SSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHT---THHHHHHTTCCEEEEEEETTCHHHHHHHHHHH-
T ss_pred CCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHH---HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-
T ss_conf 98817684787998789978999986889887666774999999---99999977998789982486489999999999-
Q ss_pred CCCCEEEEECCCCCCC-HHHHCCC---EEECCCCEEEEEECCCHHHHHHHHHHHHCCH---HHHCCCCCCCCCCCCHHHC
Q ss_conf 6785599973577676-0332131---1344787089971796588899999975015---4313583113455654440
Q gi|254780465|r 155 KKRINMYILFPEGRIS-VVQQKQM---TTSEASNINVIAVQSSFDDCQKIVKNLFSDV---FFCHSVNLSGINSINWARI 227 (469)
Q Consensus 155 ~~~i~v~vlyP~g~vS-~~Q~~qm---tt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~---~~~~~~~l~s~NSIN~~Ri 227 (469)
.-+++..|+.|...-. ..+..+. .-..........|...++++..-....+... .....+.....++.++...
T Consensus 90 ~~G~~~~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T 1tzj_A 90 HLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGG 169 (338)
T ss_dssp HHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEECCGGGTSSTTTT
T ss_pred HCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
T ss_conf 72996799974786510245553224003654056653347783166899999999887631796588257777776311
Q ss_pred CCCHHHHHHHHHHHCCC-CCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCC
Q ss_conf 11055899999874477-8873899634657887886677-750898770587236763356775322201023455656
Q gi|254780465|r 228 MAQIVYYFVSSIALGSP-NRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTS 305 (469)
Q Consensus 228 l~Q~vyYf~a~~~~~~~-~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~S 305 (469)
+.+..+......+.... ..+-.+++|+|.-|++.+-+.+ +.++..+....+..-.-.....-.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~d~iv~~~G~G~~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 234 (338)
T 1tzj_A 170 LGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQ--------------- 234 (338)
T ss_dssp THHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGGGEEEEECSSCHHHHHHH---------------
T ss_pred CEEEEHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCC---------------
T ss_conf 01541245666677634788888996678730689999999985898639999603536651343---------------
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHCCCEEC
Q ss_conf 42001340137889998709708999999875202651055202211000-12134213889999999999986395983
Q gi|254780465|r 306 PAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMS-LSFSAKRASMEDVNSVIKSVLEKSNYLVD 384 (469)
Q Consensus 306 psMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~-~~f~s~svsDeet~~~Ik~~y~~~gyiiD 384 (469)
+....+... .... ....+....+.... .......|+|+|+.++++.+++++|+++|
T Consensus 235 ------~~~~~~~~~--------------~~~~---~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~la~~eGI~~e 291 (338)
T 1tzj_A 235 ------ITRIARQTA--------------EKVG---LERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTD 291 (338)
T ss_dssp ------HHHHHHHHH--------------HHHT---CSSCCCGGGCEEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCC
T ss_pred ------CCCCCCCCH--------------HHCC---CCCCCCCCHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCC
T ss_conf ------245556631--------------1103---56786731133443045535997879999999999998098677
Q ss_pred C-CHHHHHHHHHHHHHC----CCCCEEEEECC
Q ss_conf 8-339999999998747----99839999718
Q gi|254780465|r 385 P-HTAVGIHAALACRKS----SSTPMVTLATA 411 (469)
Q Consensus 385 P-HTAvG~~aa~~~~~~----~~~p~VvLATA 411 (469)
| .||.++.++.++.+. ++..+|++-|-
T Consensus 292 P~~sg~a~a~l~~l~~~~~~~~~~~Vv~i~TG 323 (338)
T 1tzj_A 292 PVYEGKSMHGMIEMVRNGEFPEGSRVLYAHLG 323 (338)
T ss_dssp TTTHHHHHHHHHHHHHTTCSCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
T ss_conf 57789999999999967998985969999798
No 32
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon lyase, open twisted alpha/beta; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=99.35 E-value=6.9e-11 Score=94.36 Aligned_cols=279 Identities=10% Similarity=0.018 Sum_probs=148.3
Q ss_pred CCCEEEECC---------CCCEEEEECCCCCCCC---CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC
Q ss_conf 786047724---------8825466213898120---6823888999999997317982079971665404679998616
Q gi|254780465|r 87 AVTPLIQLN---------ANEFLLELFHGPTLSF---KDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAG 154 (469)
Q Consensus 87 ~~~pl~~l~---------~~~~vlELfHGPT~aF---KD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~ 154 (469)
-.+||.++. .++|+--=.+-||+|| ||+++.. ++..++++..+.+++.++|+|.+|.|.+.+.+
T Consensus 14 g~TPl~~~~~Ls~~lg~~~~i~~K~E~~~ptgSf~gnK~Rg~~~---~i~~a~~~~~~~v~~~~~s~gN~g~A~A~aa~- 89 (341)
T 1f2d_A 14 GPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEY---IVPDIVEGDYTHLVSIGGRQSNQTRMVAALAA- 89 (341)
T ss_dssp SSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTT---THHHHHHSCCSEEEEEEETTCHHHHHHHHHHH-
T ss_pred CCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHH---HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH-
T ss_conf 98815686688998789978999988999887755677999999---99999978998899967574116689999999-
Q ss_pred CCCCEEEEECCCCCCCHHHHCCCEEEC--------CCCEEEEEECCCHHHHHHHHHHHHCCHHHHC---CCCCCCCCCCC
Q ss_conf 678559997357767603321311344--------7870899717965888999999750154313---58311345565
Q gi|254780465|r 155 KKRINMYILFPEGRISVVQQKQMTTSE--------ASNINVIAVQSSFDDCQKIVKNLFSDVFFCH---SVNLSGINSIN 223 (469)
Q Consensus 155 ~~~i~v~vlyP~g~vS~~Q~~qmtt~~--------~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~---~~~l~s~NSIN 223 (469)
.-+++..++.|.+ .+.....++.... .-+..+..++..+|++............... .....+..+.+
T Consensus 90 ~~g~~~~i~~p~~-~~~~k~~~~~~~~a~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (341)
T 1f2d_A 90 KLGKKCVLIQEDW-VPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEH 168 (341)
T ss_dssp HHTCEEEEEEECC-SCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEEECGGGTTS
T ss_pred HHCCCEEEECCCC-CCHHHHHHHHHHHCCCEEHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 8389579974687-888888889974222352133327447995465125578889999987776258764366446676
Q ss_pred HHHCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCHHHHHHHHH-HHHCCCCCCEEEEE-CCCCCHHHHHHHCCCHHCCCC
Q ss_conf 4440110558999998744-77887389963465788788667-77508987705872-367633567753222010234
Q gi|254780465|r 224 WARIMAQIVYYFVSSIALG-SPNRNISFSVPTGNFGDIFAGYM-AKMMGLPIEKLIIA-TNENDTLVRMFDMGMYRPEIV 300 (469)
Q Consensus 224 ~~Ril~Q~vyYf~a~~~~~-~~~~~i~f~VPtGNfGni~Ag~~-Ak~MGLPI~kli~A-tN~NdiL~rf~~tG~y~~~~~ 300 (469)
......++........+.. ....+..+++|+|.-|...+-.. .+.++.......+. ....+......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 238 (341)
T 1f2d_A 169 KYGGLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQT---------- 238 (341)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHHHHHH----------
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH----------
T ss_conf 4214430137777899998514788889995478840799999999867654234443511311235665----------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHC-CCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 55656420013401378899987097089999998752026510552022110001-21342138899999999999863
Q gi|254780465|r 301 METTSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSL-SFSAKRASMEDVNSVIKSVLEKS 379 (469)
Q Consensus 301 ~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~-~f~s~svsDeet~~~Ik~~y~~~ 379 (469)
+..... ...... .......+..... ......|+|+|+.++++.+++++
T Consensus 239 ------------~~~~~~------------~~~~~~-------~~~~~~~~~~~~~~~~~~~~v~d~ei~~a~~~la~~e 287 (341)
T 1f2d_A 239 ------------LRIANN------------TAKLIG-------VEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQE 287 (341)
T ss_dssp ------------HHHHHH------------HHHHHT-------CCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHHHHH
T ss_pred ------------CCCCCC------------CHHHCC-------CCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf ------------177765------------300024-------5567654322123431089989799999999999981
Q ss_pred CCEECC-CHHHHHHHHHHHHHC----CCCCEEEEECC
Q ss_conf 959838-339999999998747----99839999718
Q gi|254780465|r 380 NYLVDP-HTAVGIHAALACRKS----SSTPMVTLATA 411 (469)
Q Consensus 380 gyiiDP-HTAvG~~aa~~~~~~----~~~p~VvLATA 411 (469)
|+++|| |||.++.++.++... ++..+|++-|-
T Consensus 288 Gi~~eP~~s~~a~agl~~~~~~~~~~~~~~Vv~i~TG 324 (341)
T 1f2d_A 288 GVLTDPVYEGKSMQGLIALIKEDYFKPGANVLYVHLG 324 (341)
T ss_dssp SCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
T ss_conf 9867743679999999999974999986929999799
No 33
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=90.12 E-value=0.62 Score=25.33 Aligned_cols=73 Identities=14% Similarity=0.256 Sum_probs=48.6
Q ss_pred HCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 317982079971665404679998616678559997357-7676033213113447870899717-9658889999997
Q gi|254780465|r 128 EERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPE-GRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 128 ~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~-g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
..+++.+.|.+|+|| -|.|.+..|. ..+.+|++.+=. .+..+..+ ++.. .+.++..+.+| .+.++++.+++.+
T Consensus 4 ~~knk~vlITGas~G-IG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~-~i~~-~g~~~~~~~~Dvs~~~~v~~~~~~i 78 (252)
T 3h7a_A 4 TPRNATVAVIGAGDY-IGAEIAKKFA-AEGFTVFAGRRNGEKLAPLVA-EIEA-AGGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp -CCSCEEEEECCSSH-HHHHHHHHHH-HTTCEEEEEESSGGGGHHHHH-HHHH-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHH-HHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHH-CCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 999998999758558-9999999999-879999999899999999999-9996-3983999977768999999888777
No 34
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=89.57 E-value=0.51 Score=25.92 Aligned_cols=76 Identities=17% Similarity=0.315 Sum_probs=48.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCC-HHHH-CCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577676-0332-13113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRIS-VVQQ-KQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS-~~Q~-~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|.+.|-+|+|| -|.|.+..|. ..+.+|++.|-..+-. ..++ ++-....+.+++.+.+| .+.++|+++++++-.
T Consensus 10 ~gKvalITGas~G-IG~aiA~~la-~~Ga~Vvi~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFA-LESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHT-TSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHH-HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9998999389878-9999999999-8699899980886798999999999996398399997679999999999999999
Q ss_pred C
Q ss_conf 1
Q gi|254780465|r 207 D 207 (469)
Q Consensus 207 D 207 (469)
.
T Consensus 88 ~ 88 (262)
T 3ksu_A 88 E 88 (262)
T ss_dssp H
T ss_pred H
T ss_conf 7
No 35
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=89.47 E-value=0.6 Score=25.41 Aligned_cols=74 Identities=15% Similarity=0.319 Sum_probs=50.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 798207997166540467999861667855999735776--76033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
.+||+.|++..|+--|.|.+..|. ..+-+|++.+-... ..... +.....+.+++.+.+| .+.++++++++++..
T Consensus 23 ~~kKvalVTGas~GIG~aiA~~la-~~Ga~V~i~~~~~~~~~~~~~--~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLH-DAGMAVAVSHSERNDHVSTWL--MHERDAGRDFKAYAVDVADFESCERCAEKVLA 99 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHH-TTTCEEEEEECSCHHHHHHHH--HHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHH--HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 899789991888689999999999-879989999589316899999--99985499679999627999999999999999
No 36
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=89.22 E-value=0.65 Score=25.19 Aligned_cols=72 Identities=13% Similarity=0.105 Sum_probs=47.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|...|.+|++| -|.|.+..|.. .+.+|++.+-.. .+.++ .....+.+++.+.+| .+.++|+++++++...
T Consensus 4 ~gKvalVTGas~G-IG~aia~~la~-~Ga~V~~~~~~~--~~~~~--~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (254)
T 1hdc_A 4 SGKTVIITGGARG-LGAEAARQAVA-AGARVVLADVLD--EEGAA--TARELGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCSEEEEETTTSH-HHHHHHHHHHH-TTCEEEEEESCH--HHHHH--HHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-CCCEEEEEECCH--HHHHH--HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9988999586869-99999999998-799899997987--99999--99981895489982379999999999999997
No 37
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus P2} PDB: 1qzx_A 1qzw_A
Probab=88.96 E-value=1.2 Score=23.26 Aligned_cols=204 Identities=12% Similarity=0.127 Sum_probs=94.1
Q ss_pred HHHHHHHHHHCCCCC-----CHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999987515789-----989999999998630476678604772488254662138981206823888999999997
Q gi|254780465|r 53 EIALFIFRLFIGQEI-----KSSKLRDIVNRSYHCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHIL 127 (469)
Q Consensus 53 e~a~~il~~f~~~~i-----~~~~l~~ii~~ay~~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l 127 (469)
++..+|-....++.+ +.+.+.+++.+.....-.++..|...-....+| =+|-|||++=|---. |.+- +++
T Consensus 47 ~li~~Ik~~~~~~~~~~~~~~~~~i~~iv~~eL~~llg~~~~~~~~~~~~p~V-i~lvG~~G~GKTTTi---aKLA-~~~ 121 (433)
T 3kl4_A 47 SLTAKIKERLNKEKPPSVLERKEWFISIVYDELSKLFGGDKEPNVNPTKLPFI-IMLVGVQGSGKTTTA---GKLA-YFY 121 (433)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHHHCSSSCCCCSCCSSSEE-EEECCCTTSCHHHHH---HHHH-HHH
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE-EEEECCCCCCCCCHH---HHHH-HHH
T ss_conf 99999999981266777799899999999999999848766644345789879-999747888701349---9999-999
Q ss_pred HCCCCCEEEEECCCCCH-HHHHHHHH---CCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC--CC--HHHHHH
Q ss_conf 31798207997166540-46799986---166785599973577676033213113447870899717--96--588899
Q gi|254780465|r 128 EERDHYITIVGATSGDT-GAAAIKAF---AGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ--SS--FDDCQK 199 (469)
Q Consensus 128 ~~~~~~~~il~ATSGDT-GsAa~~a~---~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~--G~--FDDcq~ 199 (469)
.++++++.+++ .|| =.||++=. ...-++.++.-++......+-+.-+......+.-++=|| |- .|+-++
T Consensus 122 ~~~g~kV~lva---~DtyR~aA~eQL~~~a~~~~v~v~~~~~~~dp~~v~~~~~~~a~~~~~DvvlIDTAGR~~~d~~~~ 198 (433)
T 3kl4_A 122 KKRGYKVGLVA---ADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETK 198 (433)
T ss_dssp HHTTCCEEEEE---ECCSCHHHHHHHHHHHHTTTCCEECCTTCSCHHHHHHHHHHHTTTTTCSEEEEEECCCSSSCCTTH
T ss_pred HHCCCEEEEEE---CCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH
T ss_conf 86598158984---477566779999998724780460466656767789999998763489989974667555240999
Q ss_pred HHHHHHCCHHH-H--CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHCCCCC
Q ss_conf 99997501543-1--35831134556544401105589999987447788738996--346578878866777508987
Q gi|254780465|r 200 IVKNLFSDVFF-C--HSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSV--PTGNFGDIFAGYMAKMMGLPI 273 (469)
Q Consensus 200 ~Vk~~f~D~~~-~--~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~V--PtGNfGni~Ag~~Ak~MGLPI 273 (469)
+..++-.=... . +.+-+.++ +.+.=....+.-|+.++.+. .+.+.= =|.-.|.+++ ++...|+||
T Consensus 199 Lm~El~~i~~~~~p~e~~LVlda---~~Gq~~~~~a~~f~~~~~~~----giIlTKlD~takgG~als--i~~~t~~PI 268 (433)
T 3kl4_A 199 LLEEMKEMYDVLKPDDVILVIDA---SIGQKAYDLASRFHQASPIG----SVIITKMDGTAKGGGALS--AVVATGATI 268 (433)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEEG---GGGGGGHHHHHHHHHHCSSE----EEEEECGGGCSCHHHHHH--HHHHHTCEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEEC---CCCCHHHHHHHHCCCCCCCC----EEEEEEECCCCCCHHHHH--HHHHHCCCE
T ss_conf 99999999875097658999734---66841799998501357765----268863237886028855--999988883
No 38
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protein structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=88.89 E-value=1.2 Score=23.23 Aligned_cols=72 Identities=14% Similarity=0.230 Sum_probs=46.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|...|.+|+ +--|.|.+..|.. .+-+|++.+-.. ...++ .....+.+++.+.+| .+.++|+++++++...
T Consensus 5 ~GKvalITG~s-~GIG~aia~~la~-~Ga~V~i~~r~~--~~l~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 5 SGKTILVTGAA-SGIGRAALDLFAR-EGASLVAVDREE--RLLAE--AVAALEAEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-TTCEEEEEESCH--HHHHH--HHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-CCCEEEEEECCH--HHHHH--HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99889994888-6899999999998-799899997988--99999--99973895799998488999999999999998
No 39
>1ulu_A Enoyl-acyl carrier protein reductase; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.2.1.2 PDB: 2yw9_A*
Probab=88.59 E-value=1.1 Score=23.59 Aligned_cols=74 Identities=8% Similarity=0.133 Sum_probs=48.5
Q ss_pred CCCCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 7982079971665-4046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|.+.|.+||++ --|.|.+.+|. ..+-+|++.+-..+.....+.. ...+.+.+.+.++ .+-+||++++.++..
T Consensus 7 ~gK~~lITGasg~~GIG~aia~~la-~~Ga~V~i~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~v~~~~~~v~~ 82 (261)
T 1ulu_A 7 SGKKALVMGVTNQRSLGFAIAAKLK-EAGAEVALSYQAERLRPEAEKL--AEALGGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHH--HHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEEEECCCHHHHHHHHHH--HHCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9998999799998649999999999-8799999981746679999997--62048724541466999999999999998
No 40
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=88.38 E-value=0.64 Score=25.23 Aligned_cols=73 Identities=14% Similarity=0.230 Sum_probs=48.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 798207997166540467999861667855999735776--76033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|-+|++| -|.|.+..|. ..+-+|++.+=... ....+ .+... .+.+++.+.+| .+-++++.+++++..
T Consensus 4 ~gk~alITGas~G-IG~aiA~~la-~~Ga~V~i~~~~~~~~~~~~~-~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (247)
T 2hq1_A 4 KGKTAIVTGSSRG-LGKAIAWKLG-NMGANIVLNGSPASTSLDATA-EEFKA-AGINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHH-HTTCEEEEEECTTCSHHHHHH-HHHHH-TTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHH-HCCCEEEEEECCCHHHHHHHH-HHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9988999379868-9999999999-879989999488367999999-99985-499589998479999999999999999
No 41
>3afn_B A1-R, 4-deoxy-L-erythro-5-hexoseulose-uronic acid reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=88.35 E-value=0.63 Score=25.30 Aligned_cols=75 Identities=16% Similarity=0.311 Sum_probs=47.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHH
Q ss_conf 1798207997166540467999861667855999735776--76033213113447870899717-96588899999975
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLF 205 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f 205 (469)
-++|...|-+|+ +--|.|.+..|. ..+-+|++.+-... ..+..+ ++. ..+.+++.+.+| .+.++++++++++.
T Consensus 5 L~gK~alVTGas-~GIG~aia~~la-~~Ga~V~i~~r~~~~~~~~~~~-~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (258)
T 3afn_B 5 LKGKRVLITGSS-QGIGLATARLFA-RAGAKVGLHGRKAPANIDETIA-SMR-ADGGDAAFFAADLATSEACQQLVDEFV 80 (258)
T ss_dssp GTTCEEEETTCS-SHHHHHHHHHHH-HTTCEEEEEESSCCTTHHHHHH-HHH-HTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HHH-HCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 899879993798-599999999999-8799999997984421999999-999-629968999813899999999999999
Q ss_pred CC
Q ss_conf 01
Q gi|254780465|r 206 SD 207 (469)
Q Consensus 206 ~D 207 (469)
..
T Consensus 81 ~~ 82 (258)
T 3afn_B 81 AK 82 (258)
T ss_dssp HH
T ss_pred HH
T ss_conf 98
No 42
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=88.05 E-value=0.46 Score=26.23 Aligned_cols=73 Identities=18% Similarity=0.301 Sum_probs=47.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 798207997166540467999861667855999735776--76033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|-+|+|| -|.|.+..|. ..+.++++.+=.+. ..+..+ ++ ...+.+++.+.+| .+.++++++++++..
T Consensus 3 ~gK~alITGas~G-IG~aia~~la-~~Ga~V~i~~~~~~~~~~~~~~-~~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (246)
T 2uvd_A 3 KGKVALVTGASRG-IGRAIAIDLA-KQGANVVVNYAGNEQKANEVVD-EI-KKLGSDAIAVRADVANAEDVTNMVKQTVD 78 (246)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHH-HH-HHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HH-HHCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9798999288868-9999999999-8799899981899899999999-99-97099689998269999999999999999
No 43
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3itd_A
Probab=87.69 E-value=0.6 Score=25.41 Aligned_cols=73 Identities=11% Similarity=0.176 Sum_probs=47.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 798207997166540467999861667855999735776--76033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|-+|+ +--|.|.+..|. ..+-+|++.+-... ...+++ ++. ..+.+++.+.+| .+.++|+++++++..
T Consensus 17 ~gK~alITGas-~GIG~aia~~la-~~Ga~V~i~~~~~~~~~~~~~~-~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVS-EIK-ALGSDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHH-HHH-HTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HHH-HHCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 98889992898-589999999999-8799899983897679999999-999-6099789998479999999999999999
No 44
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold; HET: 1PE MES; 1.80A {Aquifex aeolicus VF5} PDB: 2p68_A*
Probab=87.66 E-value=0.31 Score=27.37 Aligned_cols=74 Identities=14% Similarity=0.218 Sum_probs=47.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|.. +++..|+--|.|.+..|. ..+-+|++.+-.. +..+..+ ++....+.+++.+.+| .+.|+++++++++..
T Consensus 6 ~gK~a-lVTGas~GIG~aia~~la-~~Ga~V~~~~r~~~~l~~~~~-~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (248)
T 2pnf_A 6 QGKVS-LVTGSTRGIGRAIAEKLA-SAGSTVIITGTSGERAKAVAE-EIANKYGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp TTCEE-EETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHH-HHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEE-EEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 99989-993778789999999999-879989999798899999999-99886299389998678999999999999999
No 45
>3ojf_A Enoyl-[acyl-carrier-protein] reductase (FABL) (Na; enoyl-ACP reductase, tetramer, rossmann fold, NAD(P) binding oxidoreductase; HET: IMJ NDP; 2.20A {Bacillus cereus} PDB: 2qio_A* 3oje_A
Probab=86.69 E-value=1.7 Score=22.34 Aligned_cols=76 Identities=7% Similarity=0.138 Sum_probs=48.7
Q ss_pred CCCCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 7982079971665-4046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|.+.|.+|+|+ --|.|.+..|.. .+-+|++.+-..+.-.--+.......+.+++.+.+| .+-++++++++++..
T Consensus 5 ~gK~~lITGas~~rGIG~aiA~~la~-~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~ 82 (257)
T 3ojf_A 5 QGKTFVVMGVANQRSIAWGIARSLHN-AGAKLIFTYAGERLERNVRELADTLEGQESLVLPCDVTNDEELTACFETIKQ 82 (257)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHT-TTCEEEEEECSSTTHHHHHHHHHHSSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 88889998999986699999999998-7999999828807889999987640587237997225998999999999999
No 46
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=85.44 E-value=1.2 Score=23.38 Aligned_cols=72 Identities=11% Similarity=0.159 Sum_probs=48.7
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 20799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
|..|++..|+--|.|.+..|. ..+-+|++.+-.. +.....+ ++....+.+++.+.+| .+.|+++++++++..
T Consensus 27 KvalVTGgs~GIG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~-~l~~~~g~~~~~~~~Dls~~~~v~~~~~~~~~ 100 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLS-SLGAQCVIASRKMDVLKATAE-QISSQTGNKVHAIQCDVRDPDMVQNTVSELIK 100 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 989993798689999999999-879989999798889999999-99886399289999328999999999999999
No 47
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B}
Probab=85.24 E-value=1.8 Score=22.17 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=48.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 820799716654046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
+|+.|++..|+--|.|.+..|. ..+-+|++.+-...-...+..+.....+.+++.+.+| .+.++++++++++..
T Consensus 13 ~KvalVTGas~GIG~aia~~la-~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLH-KDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA 87 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHH-HTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9889993878689999999999-87998999808974889999999984399689997678999999999999999
No 48
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=85.17 E-value=1.3 Score=23.11 Aligned_cols=73 Identities=12% Similarity=0.182 Sum_probs=47.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|-+|+|| -|.|.+..|. ..+.+|++.+-.. +..+..+ ++ ...+.+++.+.+| .+.++++++++++..
T Consensus 20 ~GK~alITGas~G-IG~aiA~~la-~~Ga~V~~~~r~~~~l~~~~~-~~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (273)
T 1ae1_A 20 KGTTALVTGGSKG-IGYAIVEELA-GLGARVYTCSRNEKELDECLE-IW-REKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HH-HHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HH-HHCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9998999288869-9999999999-879999999799899999999-99-83299548998258999999999999999
No 49
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding motif, oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=84.71 E-value=1.4 Score=22.92 Aligned_cols=71 Identities=20% Similarity=0.385 Sum_probs=46.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHC--CCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 8207997166540467999861--66785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFA--GKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~--~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
|.+.|-+|++| -|.|.+..|. ...+.+|++..-.. +..++++ ....+.+++.+.+| .++++++.+++++-.
T Consensus 22 ktVlITGas~G-IG~aia~~l~~la~~G~~V~~~~R~~~~~~~l~~---~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 96 (267)
T 1sny_A 22 NSILITGCNRG-LGLGLVKALLNLPQPPQHLFTTCRNREQAKELED---LAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp SEEEESCCSSH-HHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH---HHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CEEEEECCCCH-HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HHHCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 98999189878-9999999999888679999999889899999999---985299889999637999999999865555
No 50
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=84.69 E-value=2 Score=21.73 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=49.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC-CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 798207997166540467999861667855999735776-76033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR-ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~-vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++| ..+++..|+--|.|.+..|. ..+-+|++.+-... ..+..+ ++....+.+++.+.+| .+.++++++++++..+
T Consensus 13 ~gK-~alVTGas~GIG~aia~~la-~~Ga~V~i~~r~~~~~~~~~~-~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (265)
T 1h5q_A 13 VNK-TIIVTGGNRGIGLAFTRAVA-AAGANVAVIYRSAADAVEVTE-KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 89 (265)
T ss_dssp TTE-EEEEETTTSHHHHHHHHHHH-HTTEEEEEEESSCTTHHHHHH-HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCC-EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 999-79992888789999999999-879989999797788999999-999970995799990189999999999999997
No 51
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=84.34 E-value=2.1 Score=21.65 Aligned_cols=70 Identities=10% Similarity=0.124 Sum_probs=45.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+|.+.|-+|+ +--|.|.+..|. ..+-+|++.+-... ...+. ...+.+++.+.+| .+-++++.+++++...
T Consensus 2 nK~vlITGas-~GIG~aia~~la-~~Ga~V~~~~~~~~----~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 2 NRGVIVTGGG-HGIGKQICLDFL-EAGDKVCFIDIDEK----RSADF-AKERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHH-HTTCEEEEEESCHH----HHHHH-HTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHH-HCCCEEEEEECCHH----HHHHH-HHHCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9889996688-889999999999-87998999979889----99999-972698699992069999999999999998
No 52
>3ijr_A Oxidoreductase, short chain dehydrogenase/reductase family; structural genomics, infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=84.24 E-value=2 Score=21.76 Aligned_cols=76 Identities=20% Similarity=0.300 Sum_probs=46.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|.. |++..|+--|.|.+..|. ..+-+|++.+=...-..-...+.....+.+++.+.+| .+.++++++++++...
T Consensus 46 ~gKva-lITGas~GIG~aiA~~la-~~Ga~V~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~v~~~~~~ 122 (291)
T 3ijr_A 46 KGKNV-LITGGDSGIGRAVSIAFA-KEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEE-EEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEE-EEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 98989-993888789999999999-879989999798065799999999964992899977789999999999999997
No 53
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=83.22 E-value=0.64 Score=25.25 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=46.0
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 179820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
-++|...|-+|++ --|.|.+..|.. .+-+|++..=. -...+ +.....+++++.+.+| .+.++++++++++...
T Consensus 7 L~gK~alITGas~-GIG~aia~~la~-~Ga~Vv~~~r~--~~~l~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 7 LEGKVALVTGASR-GIGKAIAELLAE-RGAKVIGTATS--ESGAQ--AISDYLGDNGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp CTTCEEEESSCSS-HHHHHHHHHHHH-TTCEEEEEESS--HHHHH--HHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-HHHHHHHHHHHH-CCCEEEEEECC--HHHHH--HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9999899938787-899999999998-69999999798--89999--999985787579999689999999999999998
No 54
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southeast collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=82.52 E-value=1.4 Score=22.78 Aligned_cols=71 Identities=17% Similarity=0.247 Sum_probs=47.1
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 207997166540467999861667855999735776--76033213113447870899717-965888999999750
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
+..|-+|++| -|.|.+..|. ..+-+|++.+-... .-++.+ ++....+++++.+.+| .+-++++++++++..
T Consensus 3 talITGas~G-IG~aia~~la-~~Ga~Vvi~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (245)
T 2ph3_A 3 KALITGASRG-IGRAIALRLA-EDGFALAIHYGQNREKAEEVAE-EARRRGSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp EEEETTTTSH-HHHHHHHHHH-TTTCEEEEEESSCHHHHHHHHH-HHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEECCCCCH-HHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHH-HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 8999085768-9999999999-8799899982899899999999-99863898289996888999999999999999
No 55
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=82.49 E-value=1.8 Score=22.10 Aligned_cols=74 Identities=5% Similarity=0.146 Sum_probs=46.1
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEEC-CCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 20799716654046799986166785599973-577676033213113447870899717-9658889999997501
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILF-PEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vly-P~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
|+.|++..|+--|.|.+..|.. .+-+|++.+ ....-...+..+.....+.+++.+.+| .+-++|+++++++...
T Consensus 3 KvalVTGas~GIG~aiA~~la~-~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAA-DGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-HTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 8999907886899999999998-799899995898878999999999856994899990279999999999999998
No 56
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=82.07 E-value=1.5 Score=22.57 Aligned_cols=73 Identities=14% Similarity=0.207 Sum_probs=47.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|.+|++| -|.|.+..|.. .+.+|++.+-.. +..+..+ ++. ..+.+++.+.+| .+.++++++++++..
T Consensus 8 ~GK~alVTGas~G-IG~aia~~la~-~Ga~V~~~~r~~~~l~~~~~-~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELAS-LGASVYTCSRNQKELNDCLT-QWR-SKGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHH-HTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9998999488888-99999999998-69999999698899999999-987-2498289998778999999999999999
No 57
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, human, structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=81.88 E-value=1.6 Score=22.48 Aligned_cols=73 Identities=15% Similarity=0.210 Sum_probs=45.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+|.+.|-+|+|| -|.|.+..|.. .+.+|++..=.. +..++++ ++. ..+.+++.+.+| .+-++|+++++++...
T Consensus 31 GKvalITGas~G-IG~a~A~~la~-~Ga~V~l~~r~~~~l~~~~~-~l~-~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 31 GEIVLITGAGHG-IGRLTAYEFAK-LKSKLVLWDINKHGLEETAA-KCK-GLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 988999385769-99999999998-79989999899999999999-998-54993899997279989999999999997
No 58
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, structural genomics; HET: NAP; 2.25A {Homo sapiens}
Probab=81.80 E-value=2.7 Score=20.93 Aligned_cols=76 Identities=14% Similarity=0.101 Sum_probs=46.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC-C----CHHHHCCC-EEECCCCEEEEEEC-CCHHHHHHHHH
Q ss_conf 798207997166540467999861667855999735776-7----60332131-13447870899717-96588899999
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR-I----SVVQQKQM-TTSEASNINVIAVQ-SSFDDCQKIVK 202 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~-v----S~~Q~~qm-tt~~~~Nv~~i~v~-G~FDDcq~~Vk 202 (469)
.+|.+.|-+|++| -|.|.+..|.. .+-+|++.+=... . ..+++..- ....|.++..+.+| .+-++++.+|+
T Consensus 44 ~GKvalVTGas~G-IG~aiA~~la~-~Ga~Vvi~~r~~~~~~~~~~~l~~~~~ei~~~G~~~~~~~~Dv~d~~~v~~~v~ 121 (346)
T 3kvo_A 44 AGCTVFITGASRG-IGKAIALKAAK-DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHT-TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 9987999385768-99999999998-799899997877777899999999999999709838999656689999999999
Q ss_pred HHHCC
Q ss_conf 97501
Q gi|254780465|r 203 NLFSD 207 (469)
Q Consensus 203 ~~f~D 207 (469)
++..+
T Consensus 122 ~~~~~ 126 (346)
T 3kvo_A 122 KAIKK 126 (346)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99998
No 59
>1k2w_A Sorbitol dehydrogenase; short-chain dehydrogenase, enzyme, oxidoreductase; 2.40A {Rhodobacter sphaeroides} SCOP: c.2.1.2
Probab=81.71 E-value=2.7 Score=20.91 Aligned_cols=70 Identities=11% Similarity=0.176 Sum_probs=47.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 820799716654046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
.|..+++..|+--|.|.+..|. ..+-+|++.+-. ....+ +.....+.+++.+.+| .+.|+|+++++++..
T Consensus 5 gK~alVTGas~GIG~aia~~la-~~Ga~V~~~~r~--~~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (256)
T 1k2w_A 5 GKTALITGSARGIGRAFAEAYV-REGARVAIADIN--LEAAR--ATAAEIGPAACAIALDVTDQASIDRCVAELLD 75 (256)
T ss_dssp TEEEEEETCSSHHHHHHHHHHH-HTTEEEEEEESC--HHHHH--HHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECC--HHHHH--HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 9989993888689999999999-879989999798--99999--99998589569999738999999999999999
No 60
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=81.68 E-value=2.2 Score=21.58 Aligned_cols=72 Identities=13% Similarity=0.117 Sum_probs=47.7
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 20799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
|+.+++..|+.-|.|.+..|.. .+-+|++.+-.. +..+..+ ......+.+++.+.+| .+-++|+++++++..
T Consensus 3 KvalVTGas~GIG~aia~~la~-~Ga~V~i~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLA-RGDRVAALDLSAETLEETAR-THWHAYADKVLRVRADVADEGDVNAAIAATME 76 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHSTTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 8999917897899999999998-79989999898889999999-99985499489999407999999999999999
No 61
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductase; oxidoreductase; 1.99A {Streptomyces coelicolor A3}
Probab=81.10 E-value=2.8 Score=20.77 Aligned_cols=149 Identities=17% Similarity=0.278 Sum_probs=79.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCCH
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-96588899999975015
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSDV 208 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D~ 208 (469)
.+|.+.|.+|++| -|.|.+..|.. .+-+|++.+-... ..++++.+.+| .+.|+|+++++++...
T Consensus 20 M~K~alITGas~G-IG~aia~~la~-~Ga~V~~~~r~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 84 (253)
T 2nm0_A 20 MSRSVLVTGGNRG-IGLAIARAFAD-AGDKVAITYRSGE------------PPEGFLAVKCDITDTEQVEQAYKEIEET- 84 (253)
T ss_dssp CCCEEEEETTTSH-HHHHHHHHHHH-TTCEEEEEESSSC------------CCTTSEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-CCCEEEEEECCCC------------CCCCCEEEEECCCCHHHHHHHHHHHHHH-
T ss_conf 9898999478878-99999999998-7998999989832------------2268289992389999999999999997-
Q ss_pred HHHCCCC-------------CCCCCCCCHHHCCCC-HHHHHHHH---HH-H--CCCCCCEEEEEECCCHHHH-HHHHHHH
Q ss_conf 4313583-------------113455654440110-55899999---87-4--4778873899634657887-8866777
Q gi|254780465|r 209 FFCHSVN-------------LSGINSINWARIMAQ-IVYYFVSS---IA-L--GSPNRNISFSVPTGNFGDI-FAGYMAK 267 (469)
Q Consensus 209 ~~~~~~~-------------l~s~NSIN~~Ril~Q-~vyYf~a~---~~-~--~~~~~~i~f~VPtGNfGni-~Ag~~Ak 267 (469)
| .++. +....--.|-|++-- ..-.|+.. +. + .+.+.-|+++=..|-.|.. .+.|-|-
T Consensus 85 -~-G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~as 162 (253)
T 2nm0_A 85 -H-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAAS 162 (253)
T ss_dssp -T-CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHH
T ss_pred -C-CCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCHHHHHH
T ss_conf -3-99879998997789998023999999999998720434688998774012799279998464336789996899999
Q ss_pred HCCCCCCEEEEECCCCCHHHHHHHCCCHHCC-CCCCCCCCCC
Q ss_conf 5089877058723676335677532220102-3455656420
Q gi|254780465|r 268 MMGLPIEKLIIATNENDTLVRMFDMGMYRPE-IVMETTSPAM 308 (469)
Q Consensus 268 ~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~-~~~~T~SpsM 308 (469)
|-|+- -|.|.+.. ++.+. -.+.+++|..
T Consensus 163 Kaal~------------~ltk~lA~-ela~~gIrVN~I~PG~ 191 (253)
T 2nm0_A 163 KAGLV------------GFARSLAR-ELGSRNITFNVVAPGF 191 (253)
T ss_dssp HHHHH------------HHHHHHHH-HHCSSSEEEEEEEECS
T ss_pred HHHHH------------HHHHHHHH-HHHHHCCEEEEECCCC
T ss_conf 99999------------99999999-9878695898774787
No 62
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=81.03 E-value=1.8 Score=22.09 Aligned_cols=73 Identities=11% Similarity=0.203 Sum_probs=45.5
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 179820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
-++|...|.+|++| -|.|.+..|. ..+.+|++.+=.. +..+..+ ++. . ..+++.+.+| .+.++|+++++++..
T Consensus 27 L~gKvalVTGas~G-IG~aia~~la-~~Ga~V~i~~r~~~~l~~~~~-~l~-~-~g~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 27 LAGRIALVTGGSRG-IGQMIAQGLL-EAGARVFICARDAEACADTAT-RLS-A-YGDCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHH-HTTCEEEEECSCHHHHHHHHH-HHT-T-SSCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHH-C-CCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 99987999288878-9999999999-869989999798899999999-975-0-49879999028999999999999999
No 63
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3- hydroxybutyryl-COA dehydrogenase, MHBD; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=80.82 E-value=2.9 Score=20.70 Aligned_cols=78 Identities=12% Similarity=0.055 Sum_probs=50.5
Q ss_pred HHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHH
Q ss_conf 9973179820799716654046799986166785599973577676033213113447870899717-965888999999
Q gi|254780465|r 125 HILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKN 203 (469)
Q Consensus 125 ~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~ 203 (469)
..++.-+.|+.|++..|+--|.|.+..|. ..+.+|++.+=...--+-+.+ ..+.+++.+.+| .+.++|++++++
T Consensus 5 ~~~~~LkGKvalVTGas~GIG~aia~~la-~~Ga~Vv~~~r~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (265)
T 2o23_A 5 AACRSVKGLVAVITGGASGLGLATAERLV-GQGASAVLLDLPNSGGEAQAK----KLGNNCVFAPADVTSEKDVQTALAL 79 (265)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECTTSSHHHHHH----HHCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH----HHCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 67889999989992868889999999999-879989999688688999999----8289679998106999999998754
Q ss_pred HHCC
Q ss_conf 7501
Q gi|254780465|r 204 LFSD 207 (469)
Q Consensus 204 ~f~D 207 (469)
+...
T Consensus 80 ~~~~ 83 (265)
T 2o23_A 80 AKGK 83 (265)
T ss_dssp HHHH
T ss_pred HHCC
T ss_conf 2200
No 64
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=80.58 E-value=2.5 Score=21.08 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=46.2
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 20799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
|+.|++..|+--|.|.+..|. ..+.+|++.+-.. +..+.. +++. ..+.+++.+.+| .+.++|+++++++...
T Consensus 3 KvalVTGas~GIG~aiA~~la-~~Ga~V~i~~r~~~~~~~~~-~~l~-~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLV-KDGFAVAIADYNDATAKAVA-SEIN-QAGGHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHH-HHHH-HTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHH-HHHH-HCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 899991665589999999999-87998999979899999999-9999-63992999994289999999999999997
No 65
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A
Probab=80.56 E-value=1.7 Score=22.31 Aligned_cols=81 Identities=20% Similarity=0.388 Sum_probs=47.3
Q ss_pred HHHHHHCCCCCEEEEECCCCC--HHHHHHHHHCCCCCCEEEEECCCCCCC-HHHHCCCEEECCCCEEEEEEC-CCHHHHH
Q ss_conf 999973179820799716654--046799986166785599973577676-033213113447870899717-9658889
Q gi|254780465|r 123 MDHILEERDHYITIVGATSGD--TGAAAIKAFAGKKRINMYILFPEGRIS-VVQQKQMTTSEASNINVIAVQ-SSFDDCQ 198 (469)
Q Consensus 123 ~~~~l~~~~~~~~il~ATSGD--TGsAa~~a~~~~~~i~v~vlyP~g~vS-~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq 198 (469)
++. +.-++|...|.+|+ |- -|.|.+..|. ..+-+|++.+-...-. +-..+++....+.+++.+.+| .+-++|+
T Consensus 13 ~~~-~~L~gKvalVTGAs-G~~GIG~aia~~la-~~Ga~V~i~~~~~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~ 89 (267)
T 3gdg_A 13 LDQ-LSLKGKVVVVTGAS-GPKGMGIEAARGCA-EMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCE 89 (267)
T ss_dssp HHH-HCCTTCEEEETTCC-SSSSHHHHHHHHHH-HTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHH
T ss_pred CCC-CCCCCCEEEEECCC-CCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
T ss_conf 022-59899989995989-99708999999999-8699899984894577999999999850995799981389999999
Q ss_pred HHHHHHHC
Q ss_conf 99999750
Q gi|254780465|r 199 KIVKNLFS 206 (469)
Q Consensus 199 ~~Vk~~f~ 206 (469)
++++++..
T Consensus 90 ~~~~~~~~ 97 (267)
T 3gdg_A 90 KLVKDVVA 97 (267)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 66
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp}
Probab=80.40 E-value=2.5 Score=21.15 Aligned_cols=72 Identities=14% Similarity=0.264 Sum_probs=45.5
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 207997166540467999861667855999735776--76033213113447870899717-9658889999997501
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
|..|++..|+.-|.|.+..|. ..+-+|++.+-... .-++.+ ++. ..+.+++.+.+| .+-++|+++|+++...
T Consensus 5 K~alITGas~GIG~aia~~la-~~Ga~V~i~~~~~~~~~~~~~~-~i~-~~g~~~~~~~~Dv~~~~~v~~~v~~~~~~ 79 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLA-EEGYNVAVNYAGSKEKAEAVVE-EIK-AKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHH-HHH-HTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 789992688689999999999-8799899971899899999999-999-54996899981389999999999999998
No 67
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A*
Probab=80.34 E-value=2.2 Score=21.51 Aligned_cols=74 Identities=9% Similarity=0.211 Sum_probs=46.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 798207997166540467999861667855999735776--76033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|.. +++..|+--|.|.+..|. ..+-+|++.+-... .-.+.+ ++. ..+.+++.+.+| .+.++++++++++..
T Consensus 6 ~gKv~-lVTGas~GIG~aia~~la-~~Ga~Vvi~~~~~~~~~~~~~~-~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (261)
T 1gee_A 6 EGKVV-VITGSSTGLGKSMAIRFA-TEKAKVVVNYRSKEDEANSVLE-EIK-KVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp TTCEE-EETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHH-HHH-HTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEE-EEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HHH-HCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 99989-995888789999999999-8799899996984779999999-999-6299589997668999999999999999
Q ss_pred C
Q ss_conf 1
Q gi|254780465|r 207 D 207 (469)
Q Consensus 207 D 207 (469)
.
T Consensus 82 ~ 82 (261)
T 1gee_A 82 E 82 (261)
T ss_dssp H
T ss_pred H
T ss_conf 7
No 68
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=80.30 E-value=2.5 Score=21.16 Aligned_cols=74 Identities=7% Similarity=0.200 Sum_probs=47.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC--CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577--676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG--RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g--~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++| ..|++..|+--|.|.+..|. ..+-+|++.+-.. +..++.+ ++. ..+.+++.+.+| .+-++++++++++..
T Consensus 28 ~GK-valVTGas~GIG~aiA~~la-~~Ga~Vvi~~~~~~~~~~~~~~-~l~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 103 (283)
T 1g0o_A 28 EGK-VALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTESAEEVVA-AIK-KNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp TTC-EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHH-HHH-HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCC-EEEEECCCCHHHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHH-HHH-HHCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 999-89993878689999999999-8799899971897789999999-999-7299689998778999999999999999
Q ss_pred C
Q ss_conf 1
Q gi|254780465|r 207 D 207 (469)
Q Consensus 207 D 207 (469)
.
T Consensus 104 ~ 104 (283)
T 1g0o_A 104 I 104 (283)
T ss_dssp H
T ss_pred H
T ss_conf 8
No 69
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=80.15 E-value=2.8 Score=20.79 Aligned_cols=74 Identities=11% Similarity=0.196 Sum_probs=46.2
Q ss_pred CCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 82079971665-4046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 132 HYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 132 ~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
.|..|++.-|| --|.|.+..|.. .+-+|++.+-.. +..+..+ ++......+++.+.+| .+.++|+.+++++...
T Consensus 22 gKvalITGasg~GIG~aia~~la~-~Ga~V~i~~r~~~~l~~~~~-~i~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALL-EGADVVISDYHERRLGETRD-QLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 997999499974899999999998-79989999798899999999-998517984899991589999999999999998
No 70
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=79.86 E-value=3.1 Score=20.49 Aligned_cols=73 Identities=11% Similarity=0.160 Sum_probs=45.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++| +.|++..|+--|.|.+..|.. .+-+|++..-.. +..+..+ ++. ..+.+++.+.+| .+.|+|+++++++..
T Consensus 43 enK-valITGas~GIG~aiA~~la~-~Ga~Vvi~~r~~~~l~~~~~-~l~-~~g~~~~~~~~Dvtd~~~v~~~~~~~~~ 117 (285)
T 2c07_A 43 ENK-VALVTGAGRGIGREIAKMLAK-SVSHVICISRTQKSCDSVVD-EIK-SFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp SSC-EEEEESTTSHHHHHHHHHHTT-TSSEEEEEESSHHHHHHHHH-HHH-TTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCC-EEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 997-899908887899999999998-69999999799999999999-999-6399489998348999999999999999
No 71
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta-hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A*
Probab=79.67 E-value=1.5 Score=22.69 Aligned_cols=73 Identities=12% Similarity=0.152 Sum_probs=48.7
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC--CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 20799716654046799986166785599973577--676033213113447870899717-9658889999997501
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG--RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g--~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
|..+++..|+--|.|.+..|. ..+-+|++.+-.. ....+++ ++....+.+++.+.+| .+.++|+++++++...
T Consensus 5 K~alITGas~GIG~aia~~la-~~Ga~V~i~~~~~~~~~~~~~~-~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALA-AQGADIVLNGFGDAAEIEKVRA-GLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEECCSCHHHHHHHHH-HHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 989992778689999999999-8799899996986778999999-998841980899976789999999999999997
No 72
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=78.84 E-value=3.3 Score=20.28 Aligned_cols=64 Identities=17% Similarity=0.308 Sum_probs=44.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|...|.+|++ --|.|.+..|.. .+-+|++.+-+. . ...++..+.+| .+-++|+.+++++...
T Consensus 7 ~gKvalITG~s~-GIG~aia~~la~-~Ga~Vv~~~~~~-------~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 7 RDKVVIVTGASM-GIGRAIAERFVD-EGSKVIDLSIHD-------P-----GEAKYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp TTCEEEEESCSS-HHHHHHHHHHHH-TTCEEEEEESSC-------C-----CSCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHH-CCCEEEEEECCC-------C-----CCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 999899938986-899999999998-799999984897-------5-----5688429998279999999999999998
No 73
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=78.23 E-value=3.5 Score=20.16 Aligned_cols=73 Identities=12% Similarity=0.213 Sum_probs=46.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 798207997166540467999861667855999735776--76033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|.. |++..|+--|.|.+..|. ..+-+|++.+-... ..+..+ +.. ..+.++..+.+| .+-++++++++++..
T Consensus 7 ~gK~a-lITGas~GIG~aiA~~la-~~Ga~Vvi~~~~~~~~~~~~~~-~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 7 TNRTI-VVAGAGRDIGRACAIRFA-QEGANVVLTYNGAAEGAATAVA-EIE-KLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTCEE-EEETTTSHHHHHHHHHHH-HTTCEEEEEECSSCHHHHHHHH-HHH-TTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEE-EEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HHH-HCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 99989-993798689999999999-8799999984883678999999-999-7399689999038999999999999999
No 74
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1
Probab=78.16 E-value=2.8 Score=20.78 Aligned_cols=51 Identities=14% Similarity=0.267 Sum_probs=25.4
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 98120-6823888999999997317982079971665404679998616678559997
Q gi|254780465|r 107 PTLSF-KDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYIL 163 (469)
Q Consensus 107 PT~aF-KD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vl 163 (469)
|...+ +.+.+...+..++..+.+. +..+--.. |..|.++....+.=++++|
T Consensus 63 P~g~~~~~~SL~~~a~~L~~~l~~~---v~f~~d~~---g~~~~~~i~~l~~g~i~lL 114 (394)
T 1php_A 63 PKGKVVEELRLDAVAKRLGELLERP---VAKTNEAV---GDEVKAAVDRLNEGDVLLL 114 (394)
T ss_dssp CCSSCCGGGCSHHHHHHHHHHHTSC---CEECSCSS---SHHHHHHHHTCCTTCEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCC---CCEECCCC---CHHHHHHHHHCCCCCEEEH
T ss_conf 9998786457599999999864556---41001335---6779999961688868633
No 75
>3imf_A Short chain dehydrogenase; structural genomics, infectious diseases, center for structural genomics of infectious diseases, oxidoreductase; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=77.18 E-value=3.7 Score=19.96 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=47.8
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+.|+.|++..|+--|.|.+..|.. .+-+|++.+-.. +..+.++ ++. ..+.+++.+.+| .+-++|+++++++...
T Consensus 5 k~KvalITGas~GIG~aia~~la~-~Ga~V~i~~r~~~~l~~~~~-~l~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAK-EGARVVITGRTKEKLEEAKL-EIE-QFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHC-CSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 849899938987899999999998-79989999798899999999-998-56994899993089999999999999998
No 76
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: NAP; 2.07A {Thermotoga maritima MSB8} SCOP: c.2.1.2
Probab=76.31 E-value=3.8 Score=19.88 Aligned_cols=74 Identities=12% Similarity=0.201 Sum_probs=46.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|.+|+ +--|.|.+..|. ..+-+|++.+=.. +..+..+ ++....+.+++.+.+| .+-++|+++++++..
T Consensus 20 ~gKvalITGas-~GIG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~-~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 20 RGRVALVTGGS-RGLGFGIAQGLA-EAGCSVVVASRNLEEASEAAQ-KLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 99989994898-789999999999-879989999798899999999-99997099579999348999999999999999
No 77
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=76.08 E-value=3.9 Score=19.76 Aligned_cols=74 Identities=8% Similarity=0.220 Sum_probs=48.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
-+.++.+++..|+--|.|.+..|. ..+-+|++.+=.. +..+..+ ++. ..+.+++.+.+| .+.|+|+.+|+++..
T Consensus 20 l~gKVAlVTGas~GIG~aiA~~la-~~Ga~Vvi~~r~~~~l~~~~~-~i~-~~g~~~~~~~~Dvt~~~~v~~~v~~~~~ 95 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLG-KEGLRVFVCARGEEGLRTTLK-ELR-EAGVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHH-HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 699789992767599999999999-879999999799899999999-998-5399289999207999999999999999
No 78
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=75.98 E-value=4 Score=19.75 Aligned_cols=73 Identities=12% Similarity=0.165 Sum_probs=45.9
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
.|..|++..|+--|.|.+..|.. .+.+|++.+=.. +..+.+ .++.. .+.+++.+.+| .+.++|+++++++...
T Consensus 7 gKvalITGas~GIG~aia~~la~-~Ga~V~~~~r~~~~l~~~~-~~l~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAE-EGTAIALLDMNREALEKAE-ASVRE-KGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHH-HHHHT-TTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHH-HHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 39899938787899999999998-7998999989989999999-99985-2993899982389999999999999998
No 79
>1xhl_A Short-chain dehydrogenase/reductase family member (5L265), putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=75.71 E-value=1.9 Score=21.98 Aligned_cols=75 Identities=21% Similarity=0.312 Sum_probs=47.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEE--ECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 179820799716654046799986166785599973577-676033213113--447870899717-9658889999997
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTT--SEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt--~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
-++|...|-+|++| -|.|.+..|. ..+-+|++.+-.. +..+..+ ++.. ..+.+++.+.+| .+.++++++++++
T Consensus 24 L~GKvalVTGas~G-IG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~-~i~~~g~~~~~v~~~~~Dvs~~~~v~~~~~~~ 100 (297)
T 1xhl_A 24 FSGKSVIITGSSNG-IGRSAAVIFA-KEGAQVTITGRNEDRLEETKQ-QILKAGVPAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 89988999477868-9999999999-879989999899999999999-99974898763689980089999999999999
Q ss_pred HC
Q ss_conf 50
Q gi|254780465|r 205 FS 206 (469)
Q Consensus 205 f~ 206 (469)
..
T Consensus 101 ~~ 102 (297)
T 1xhl_A 101 LA 102 (297)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 80
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reductase family; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus HB8}
Probab=75.54 E-value=3.6 Score=20.06 Aligned_cols=69 Identities=16% Similarity=0.190 Sum_probs=44.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 9820799716654046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++.+.|-+|+|| -|.|.+..|.. .+.+|++..-.. ..+++ +....++++.+.+| .+.++++++++++..
T Consensus 5 k~~VlITGas~G-IG~a~a~~la~-~G~~V~~~~r~~--~~l~~---~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 74 (234)
T 2ehd_A 5 KGAVLITGASRG-IGEATARLLHA-KGYRVGLMARDE--KRLQA---LAAELEGALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp CCEEEESSTTSH-HHHHHHHHHHH-TTCEEEEEESCH--HHHHH---HHHHSTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHH-CCCEEEEEECCH--HHHHH---HHHHHCCCEEEECCCCCHHHHHHHHHHHHH
T ss_conf 988999776749-99999999998-799999998999--99999---999856865996567989999999999999
No 81
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=75.53 E-value=1.9 Score=21.93 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=12.3
Q ss_pred EEEEEECCCHHHHHHHHHHH--HCCCCC
Q ss_conf 38996346578878866777--508987
Q gi|254780465|r 248 ISFSVPTGNFGDIFAGYMAK--MMGLPI 273 (469)
Q Consensus 248 i~f~VPtGNfGni~Ag~~Ak--~MGLPI 273 (469)
+-+.+-+.-|+-+.+ +++ .++|||
T Consensus 250 vmi~~~~~G~~~~~~--l~~~~~~~lpI 275 (425)
T 2zvi_A 250 LLFNVFAYGLDVMQG--LAEDPEIPVPI 275 (425)
T ss_dssp EEECGGGTCHHHHHH--HHHCTTCCSCE
T ss_pred EEEEECCCHHHHHHH--HHHHCCCCCEE
T ss_conf 776412022889999--99746789538
No 82
>1v6s_A Phosphoglycerate kinase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=74.97 E-value=4 Score=19.74 Aligned_cols=44 Identities=14% Similarity=0.033 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 23888999999997317982079971665404679998616678559997
Q gi|254780465|r 114 IAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYIL 163 (469)
Q Consensus 114 ~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vl 163 (469)
+.+...+..++..|.+ .+ ..-.-..|..+.++....+.=++++|
T Consensus 68 ~SL~~va~~L~~~L~~---~v---~~~~~~~~~~~~~~i~~l~~g~I~LL 111 (390)
T 1v6s_A 68 YSLAPVGEALRAHLPE---AR---FAPFPPGSEEARREAEALRPGEVLLL 111 (390)
T ss_dssp GCSHHHHHHHHHHCTT---EE---ECCSCTTSHHHHHHHHTCCTTCEEEC
T ss_pred CCHHHHHHHHHHHCCC---CE---EEECCCCCHHHHHHHHCCCCCCEEEE
T ss_conf 3689999999976387---61---75214541777767641688878863
No 83
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=73.94 E-value=3.5 Score=20.09 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=47.6
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 207997166540467999861667855999735776--76033213113447870899717-9658889999997501
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++.+++..|+--|.|.+..|. ..+-++++.+-... .-++. +++. ..+.+++.+.+| .+.++++++++++...
T Consensus 2 pVvlITGas~GIG~aia~~la-~~Ga~V~i~~~~~~~~~~~~~-~~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLG-KAGCKVLVNYARSAKAAEEVS-KQIE-AYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHH-HHHH-HHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHH-HHHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 999992887589999999999-879989998189979999999-9999-74992899983799999999999999998
No 84
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp}
Probab=73.90 E-value=4.5 Score=19.39 Aligned_cols=74 Identities=12% Similarity=0.165 Sum_probs=48.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+.|+.+++..|+--|.|.+..|. ..+-+|++.+-.. +..+..+ ++. ..+.+++.+.+| .+-++|+++++++...
T Consensus 4 ~~KvalITGas~GIG~aiA~~la-~~Ga~V~~~~r~~~~l~~~~~-~l~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALA-SKGATVVGTATSQASAEKFEN-SMK-EKGFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHH-HHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99999992888689999999999-869999999798899999999-998-54995899991079999999999999997
No 85
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=73.88 E-value=4.5 Score=19.39 Aligned_cols=70 Identities=19% Similarity=0.292 Sum_probs=45.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|...|-+|++| -|.|.+..|. ..+-+|++.+-.. ...++. ...-+.+.+.+| .+.++|+++++++...
T Consensus 4 ~gK~~lVTG~s~G-IG~aia~~la-~~Ga~V~~~~r~~--~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 74 (245)
T 1uls_A 4 KDKAVLITGAAHG-IGRATLELFA-KEGARLVACDIEE--GPLREA----AEAVGAHPVVMDVADPASVERGFAEALAH 74 (245)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHH-HTTCEEEEEESCH--HHHHHH----HHTTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHH-HCCCEEEEEECCH--HHHHHH----HHHCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9989999377878-9999999999-8799999997987--899999----98759969999579999999999999997
No 86
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase; 2.09A {Bartonella henselae str} PDB: 3enn_A 3emk_A
Probab=73.85 E-value=4.5 Score=19.39 Aligned_cols=71 Identities=10% Similarity=0.155 Sum_probs=47.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|.. +++..|+.-|.|.+..|. ..+-+|++.+-.. +..++.+ ..+.+++.+.+| .+.++++++++++...
T Consensus 26 ~gK~a-lVTGas~GIG~aia~~la-~~Ga~V~i~~r~~~~l~~~~~-----~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 26 TGRKA-LVTGATGGIGEAIARCFH-AQGAIVGLHGTREDKLKEIAA-----DLGKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp TTCEE-EESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-----HHCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEE-EEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-----HHCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99989-993878689999999999-879999999799999999999-----83997799990179999999999999998
No 87
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=73.82 E-value=3.6 Score=20.07 Aligned_cols=13 Identities=15% Similarity=0.151 Sum_probs=7.3
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 7089999998752
Q gi|254780465|r 326 RNSLLVKEAFYSL 338 (469)
Q Consensus 326 ~d~~~v~~~m~~l 338 (469)
.++.++.++.++-
T Consensus 270 ~nA~~vA~~L~~h 282 (398)
T 2rfv_A 270 ENALKIARFLEGH 282 (398)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999849
No 88
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=73.35 E-value=4.6 Score=19.31 Aligned_cols=74 Identities=8% Similarity=0.107 Sum_probs=46.6
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCE-EECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 9820799716654046799986166785599973577-67603321311-3447870899717-965888999999750
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMT-TSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmt-t~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
+.|..|++..|+--|.|.+..|. ..+-+|++.+-.. +.-...+ +.. ...+..++.+.+| ++.++++++++++..
T Consensus 12 ~gKvalVTGas~GIG~aia~~la-~~Ga~V~i~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLA-AEGAKLSLVDVSSEGLEASKA-AVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 97989993788789999999999-879989999788888999999-999847997399997148999999999999999
No 89
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A*
Probab=72.88 E-value=4.7 Score=19.23 Aligned_cols=74 Identities=15% Similarity=0.110 Sum_probs=46.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|...|.+|+ +--|.|.+..|.. .+-+|++.+-.. +.-+.++ ++. ..+.+++.+.+| .+-|+++.+++++...
T Consensus 33 ~gK~alVTGas-~GIG~aiA~~la~-~Ga~Vvi~~r~~~~~~~~~~-~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 33 KGKIALVTGAS-YGIGFAIASAYAK-AGATIVFNDINQELVDRGMA-AYK-AAGINAHGYVCDVTDEDGIQAMVAQIESE 108 (291)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH-HHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99879992878-5999999999998-79989999799999999999-998-54995899996289999999999999997
No 90
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=72.79 E-value=4.7 Score=19.22 Aligned_cols=101 Identities=17% Similarity=0.236 Sum_probs=52.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCE----EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 8998999999999863047667860477248825----466213898120682388899999999731798207997166
Q gi|254780465|r 66 EIKSSKLRDIVNRSYHCFRNAAVTPLIQLNANEF----LLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATS 141 (469)
Q Consensus 66 ~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~~~~~----vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATS 141 (469)
-|++++|.+++++.... ++++ |.-+-+..| +-.=.|=|+-.+.+ .+...+.+......+..+++.|++|
T Consensus 6 ~Isp~eL~~ll~~~~~~---~~v~-IIDvR~~Ey~~gHI~GAinip~~~~~~---~~~~~~~~~~~~~~~~~iv~~c~~s 78 (152)
T 2j6p_A 6 YIKPEELVELLDNPDSL---VKAA-VIDCRDSDRDCGFIVNSINMPTISCTE---EMYEKLAKTLFEEKKELAVFHCAQS 78 (152)
T ss_dssp EECHHHHHHHHHSHHHH---HTEE-EEECCSTTGGGCBCTTCEECCTTTCCH---HHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EECHHHHHHHHHCCCCC---CCEE-EEECCHHHHHCCCCCCCEECCHHHHHH---HHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 58999999998586766---8869-998981898578568888757588888---7667877656644884189996579
Q ss_pred CCHHHHHHHHHCC------CCCCEEEEECCCCCCCHHHHC
Q ss_conf 5404679998616------678559997357767603321
Q gi|254780465|r 142 GDTGAAAIKAFAG------KKRINMYILFPEGRISVVQQK 175 (469)
Q Consensus 142 GDTGsAa~~a~~~------~~~i~v~vlyP~g~vS~~Q~~ 175 (469)
|..|..|+..++. ...-+|+|| +|+...-|+.
T Consensus 79 ~~r~~~aA~~l~~~~~~~~~g~~~V~iL--~GG~~~W~~~ 116 (152)
T 2j6p_A 79 LVRAPKGANRFALAQKKLGYVLPAVYVL--RGGWEAFYHM 116 (152)
T ss_dssp SSHHHHHHHHHHHHHHHHTCCCSEEEEE--TTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCEEEE--CCCHHHHHHH
T ss_conf 8749999999999999846999818998--8858999976
No 91
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reductase; structural genomics, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=72.78 E-value=4.7 Score=19.22 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=44.0
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC--CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 20799716654046799986166785599973577--676033213113447870899717-965888999999750
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG--RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g--~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
|..|++..|+--|.|.+..|. ..+-+|++.+-.. +.-+..+ ++. ..+.+++.+.+| .+.++++.+++++..
T Consensus 8 K~alITGas~GIG~aia~~la-~~Ga~V~i~~~~~~~~~~~~~~-~i~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLA-NDGALVAIHYGNRKEEAEETVY-EIQ-SNGGSAFSIGANLESLHGVEALYSSLDN 81 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCSHHHHHHHH-HHH-HTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HHH-HCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 989994888789999999999-8799999982898899999999-999-6499579996587998999999999999
No 92
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=72.75 E-value=4.7 Score=19.21 Aligned_cols=73 Identities=10% Similarity=0.082 Sum_probs=46.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++| ..+++..|+--|.|.+..|. ..+.+|++.+-.. +..+..+ ++. ..+.+++.+.+| .+.++|+++++++..
T Consensus 10 ~gK-valITGas~GIG~aia~~la-~~Ga~V~i~~r~~~~~~~~~~-~l~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (255)
T 1fmc_A 10 DGK-CAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVVD-EIQ-QLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp TTC-EEEETTTTSHHHHHHHHHHH-TTTCEEEEEESCHHHHHHHHH-HHH-HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCC-EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 999-89993897589999999999-879989999799899999999-999-6399389999228999999999999999
No 93
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=72.09 E-value=4.9 Score=19.11 Aligned_cols=71 Identities=10% Similarity=0.094 Sum_probs=46.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
.|..|++..|+--|.|.+..|. ..+-+|++.+-.. ...++ .....+.+++.+.+| .+.|+++++++++...
T Consensus 7 gK~alITGas~GIG~aia~~la-~~Ga~V~~~~r~~--~~l~~--~~~el~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMV-AEGAKVVFGDILD--EEGKA--MAAELADAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCH--HHHHH--HHHHTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCH--HHHHH--HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 8989994888789999999999-8799999997988--99999--99985187179998479999999999999997
No 94
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=71.60 E-value=5 Score=19.05 Aligned_cols=73 Identities=18% Similarity=0.277 Sum_probs=46.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEE--ECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 820799716654046799986166785599973577-676033213113--447870899717-965888999999750
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTT--SEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt--~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
.|..+++..|+--|.|.+..|. ..+.+|++.+=.. +..+..+ ++.. ..+.+++.+.+| .+-++++++++++..
T Consensus 6 gKvalVTGas~GIG~aia~~la-~~Ga~V~i~~r~~~~l~~~~~-~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFA-REGAKVTITGRHAERLEETRQ-QILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9889994858789999999999-879989999798899999999-9996578777657998557999999999999999
No 95
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis}
Probab=71.42 E-value=4.5 Score=19.34 Aligned_cols=75 Identities=7% Similarity=0.055 Sum_probs=46.6
Q ss_pred CCCCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 7982079971665-4046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|...|.+|+|| --|.|.+..|. ..+-+|++.+-.....+..+ ++... +..+..+.++ .+-++|+.+++++...
T Consensus 30 ~GK~alITGass~~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~-~l~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAR-EAGAELAFTYQGDALKKRVE-PLAEE-LGAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHH-HTTCEEEEEECSHHHHHHHH-HHHHH-HTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHH-HHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9987999899999559999999999-86999999838779999999-99850-695599865769899999999999998
No 96
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=71.42 E-value=5.1 Score=19.01 Aligned_cols=42 Identities=12% Similarity=0.132 Sum_probs=23.6
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
Q ss_conf 8738996346578878866777508987705872367633567753
Q gi|254780465|r 246 RNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFD 291 (469)
Q Consensus 246 ~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~ 291 (469)
+.++..+-.|.++|.+- +-.|..|++=.+--+..+...+.+.
T Consensus 209 ~k~D~iiigG~~antfL----~a~G~~iG~s~~e~~~~~~~~~i~~ 250 (398)
T 1vpe_A 209 EKADRILIGGAMMFTFL----KALGKEVGSSRVEEDKIDLAKELVE 250 (398)
T ss_dssp TTCSEEEECTTTHHHHH----HHTSCCCTTSCCCGGGHHHHHHHHH
T ss_pred HHHCEEEECCHHHHHHH----HHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 86042022629999999----9779876754355124789999999
No 97
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier- protein) reductase, NAD; HET: NAD; 1.80A {Anaplasma phagocytophilum HZ} PDB: 3k2e_A*
Probab=71.09 E-value=5.1 Score=18.96 Aligned_cols=75 Identities=9% Similarity=0.109 Sum_probs=48.0
Q ss_pred CCCCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 7982079971665-4046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|...|-+|+|| --|.|.+.+|. ..+-+|++.+=.....+..+ +... .+..+..+.+| .+-++|+++++++...
T Consensus 29 ~GK~alVTGass~~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~-~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVC-AQGAEVALTYLSETFKKRVD-PLAE-SLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHH-HHHH-HHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHH-HHHH-HCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9998999899998649999999999-86999999968879999999-9997-3797069966889999999999999984
No 98
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, short chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=71.00 E-value=5.2 Score=18.95 Aligned_cols=72 Identities=7% Similarity=0.117 Sum_probs=45.3
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 207997166540467999861667855999735776--76033213113447870899717-9658889999997501
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
|..|++..|+--|.|.+..|. ..+-+|++.+=... ..++++ ++. ..+.+++.+.+| .+-++|+++++++...
T Consensus 22 KvalVTGas~GIG~aiA~~la-~~Ga~Vvi~~~~~~~~~~~~~~-~l~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 96 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELG-RRGASVVVNYGSSSKAAEEVVA-ELK-KLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHH-HHH-HTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHH-HHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 989996888689999999999-8799899972898789999999-999-73995899982489999999999999998
No 99
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=70.86 E-value=5 Score=19.07 Aligned_cols=72 Identities=10% Similarity=0.050 Sum_probs=46.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
.|+.|++..|+--|.|.+..|.. .+-+|++.+-.. +..++.+ ++. ..+.+++.+.+| .+.++++++++++..
T Consensus 28 gKvalITGas~GIG~aiA~~la~-~Ga~Vv~~~r~~~~l~~~~~-~i~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELAR-RGAMVIGTATTEAGAEGIGA-AFK-QAGLEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH-HHH-HHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 99899938685899999999998-69999999798899999999-999-6599469999736999999999999999
No 100
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=70.80 E-value=5.2 Score=18.92 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=45.4
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
.|..+++..|+--|.|.+..|. ..+-+|++.+= ++-.-++.....+.+++.+.+| .+.++++++++++...
T Consensus 6 gKvalITGas~GIG~aia~~la-~~Ga~V~~~~r----~~~~l~~~~~~l~~~~~~~~~Dvt~~~~~~~~~~~~~~~ 77 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLL-GEGAKVAFSDI----NEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEECS----CHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEEC----CHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 9889994888789999999999-87999999979----999999999983896599980179999999999999998
No 101
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=70.32 E-value=5.3 Score=18.85 Aligned_cols=73 Identities=12% Similarity=0.146 Sum_probs=48.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+.|..+++..|+--|.|.+..|. ..+-+|++.+-.. .+..+.+.. ..+.+++.+.+| .+.++++++++++...
T Consensus 6 ~gKvalITGas~GIG~aiA~~la-~~Ga~V~~~~~~~--~~~~~~~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFA-VEGADIAIADLVP--APEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSC--CHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCC--HHHHHHHHH-HCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 82989992888689999999999-8799899997993--089999999-65995799993289999999999999997
No 102
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=70.29 E-value=5.3 Score=18.84 Aligned_cols=73 Identities=7% Similarity=0.058 Sum_probs=47.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++| ..|++..|+--|.|.+..|. ..+-+|++.+-...- + ...++ ...+.+++.+.+| .+.++++++++++...
T Consensus 3 ~gK-valITGas~GIG~aiA~~la-~~Ga~V~i~~~~~~~-~-~~~~~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 3 KGK-TALVTGSTSGIGLGIAQVLA-RAGANIVLNGFGDPA-P-ALAEI-ARHGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp TTC-EEEESSCSSHHHHHHHHHHH-HTTCEEEEECSSCCH-H-HHHHH-HTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCC-EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHH-H-HHHHH-HHCCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 999-89991898589999999999-879999999699659-9-99999-965995899982069999999999999997
No 103
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=70.20 E-value=5.4 Score=18.83 Aligned_cols=69 Identities=16% Similarity=0.187 Sum_probs=42.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-9658889999997
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
++|...|-+|++ --|.|.+..|. ..+-+|++.+-.. +..+..+ + ..+.++..+.+| .+.++++++++++
T Consensus 10 ~gKvalVTGas~-GIG~aia~~la-~~Ga~V~~~~r~~~~l~~~~~-~---~~~~~~~~~~~Dv~~~~~v~~~~~~v 80 (254)
T 2wsb_A 10 DGACAAVTGAGS-GIGLEICRAFA-ASGARLILIDREAAALDRAAQ-E---LGAAVAARIVADVTDAEAMTAAAAEA 80 (254)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-H---HGGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-H---HCCCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 999899948887-89999999999-879999999798899999999-8---47885689997489999999999999
No 104
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=69.38 E-value=5.6 Score=18.72 Aligned_cols=74 Identities=11% Similarity=0.192 Sum_probs=47.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+.|..|++..|+--|.|.+..|. ..+-+|++.+=.. +..+..+ ++. ..+.+++.+.+| .+.|+|+++++++...
T Consensus 13 ~gKvalVTGas~GIG~aia~~la-~~Ga~V~i~~r~~~~l~~~~~-~l~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLA-QDGAHVVVSSRKQENVDRTVA-TLQ-GEGLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99979992778789999999999-879999999798899999999-988-34983689976579999999999999998
No 105
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovarkurstaki str}
Probab=69.19 E-value=5.6 Score=18.69 Aligned_cols=76 Identities=11% Similarity=0.164 Sum_probs=48.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC-CHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 17982079971665404679998616678559997357767-6033213113447870899717-965888999999750
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI-SVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v-S~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
...|. .|++..|+--|.|.+..|. ..+-+|++.+-...- -+..+ +.....+.++..+.+| .+-++++++++++..
T Consensus 5 ~~~Kt-AlITGas~GIG~aia~~la-~~Ga~V~i~~r~~~~~~~~~~-~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 5 RFVRH-ALITAGTKGLGKQVTEKLL-AKGYSVTVTYHSDTTAMETMK-ETYKDVEERLQFVQADVTKKEDLHKIVEEAMS 81 (264)
T ss_dssp -CCCE-EEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHH-HHTGGGGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCE-EEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHH-HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 88998-9994767689999999999-879989999798166999999-99986399589999238999999999999999
Q ss_pred C
Q ss_conf 1
Q gi|254780465|r 207 D 207 (469)
Q Consensus 207 D 207 (469)
.
T Consensus 82 ~ 82 (264)
T 3i4f_A 82 H 82 (264)
T ss_dssp H
T ss_pred H
T ss_conf 7
No 106
>1mk3_A BCL-W, apoptosis regulator BCL-W; BCL-W protein, apoptotis; NMR {Homo sapiens} SCOP: f.1.4.1 PDB: 1zy3_A 1o0l_A
Probab=68.78 E-value=4.9 Score=19.10 Aligned_cols=32 Identities=22% Similarity=0.576 Sum_probs=20.2
Q ss_pred CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 65888999999750154313583113455654440110558999998
Q gi|254780465|r 193 SFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 193 ~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
...-...+++++|.| .||||||++ .|+|-+.+
T Consensus 74 ~~~~f~~Va~elF~d-------------ginWGRIVa--l~~F~g~L 105 (178)
T 1mk3_A 74 AQQRFTQVSDELFQG-------------GPNWGRLVA--FFVFGAAL 105 (178)
T ss_dssp SHHHHHHHHHHHHTT-------------CCCSHHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-------------CCCHHHHHH--HHHHHHHH
T ss_conf 999999999998579-------------996999999--99999999
No 107
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=68.55 E-value=5.8 Score=18.60 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=46.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 179820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
-++|...|.+|+ +--|.|.+..|. ..+.+|++.+-.. +..+..+ ++. ..+.+++.+.+| .+.++|+++++++..
T Consensus 10 L~gKvalITGas-~GIG~aia~~la-~~Ga~V~~~~~~~~~~~~~~~-~l~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 10 LNDAVAIVTGAA-AGIGRAIAGTFA-KAGASVVVTDLKSEGAEAVAA-AIR-QAGGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp CTTCEEEECSCS-SHHHHHHHHHHH-HHTCEEEEEESSHHHHHHHHH-HHH-HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 999989994867-689999999999-879999999798899999999-999-6499389998018999999999999999
No 108
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogenase; structural genomics, short-chain dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=68.34 E-value=5.9 Score=18.57 Aligned_cols=95 Identities=11% Similarity=0.128 Sum_probs=54.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCE-EECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-67603321311-3447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMT-TSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmt-t~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++| ..+++..|+--|.|.+..|. ..+.+|++.+=.. +..+... ++. ...+.+++.+.+| .+.++++++++++..
T Consensus 6 ~GK-valITGas~GIG~aia~~la-~~Ga~V~i~~r~~~~~~~~~~-~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 6 NGK-VALVTGAAQGIGRAFAEALL-LKGAKVALVDWNLEAGVQCKA-ALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp TTC-EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCC-EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 998-89992858789999999999-879989999797888999999-999752798489999527999999999999999
Q ss_pred CHHHHCCCC-----CCCCCCCCHHHCCCC
Q ss_conf 154313583-----113455654440110
Q gi|254780465|r 207 DVFFCHSVN-----LSGINSINWARIMAQ 230 (469)
Q Consensus 207 D~~~~~~~~-----l~s~NSIN~~Ril~Q 230 (469)
.. .++. -+..+.-.|-+++.-
T Consensus 83 ~~---g~iDiLVnNAG~~~~~~~~~~~~v 108 (267)
T 2gdz_A 83 HF---GRLDILVNNAGVNNEKNWEKTLQI 108 (267)
T ss_dssp HH---SCCCEEEECCCCCCSSSHHHHHHH
T ss_pred HC---CCCCEEEECCCCCCHHHHHHHHHH
T ss_conf 72---998899989987978998889988
No 109
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix K1}
Probab=67.59 E-value=6.1 Score=18.47 Aligned_cols=73 Identities=11% Similarity=0.241 Sum_probs=45.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-9658889999997
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
++|. .|++..|+--|.|.+..|. ..+-+|++.+-.. +..+..+..-....+.+++.+.+| .+.++++++++++
T Consensus 6 ~gK~-alVTG~s~GIG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~~l~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 6 QGKL-AVVTAGSSGLGFASALELA-RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp TTCE-EEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCE-EEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 9998-9991878689999999999-8799999997988999999999875358973999985799999999999999
No 110
>2ims_A Apoptosis regulator BAK; dimer; 1.48A {Homo sapiens} PDB: 2imt_A 2jcn_A 2yv6_A 2jby_B 2voh_B*
Probab=67.11 E-value=4.5 Score=19.37 Aligned_cols=30 Identities=33% Similarity=0.662 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHH
Q ss_conf 658889999997501543135831134556544401105589999
Q gi|254780465|r 193 SFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVS 237 (469)
Q Consensus 193 ~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a 237 (469)
..+-...+++++|.| .||||||++ .|+|-+
T Consensus 92 a~~~F~~Va~elF~d-------------ginWGRIva--l~~F~~ 121 (171)
T 2ims_A 92 AYEYFTKIATSLFES-------------GINWGRVVA--LLGFGY 121 (171)
T ss_dssp HHHHHHHHHHHHTTT-------------CCCHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHCC-------------CCCHHHHHH--HHHHHH
T ss_conf 999999999999548-------------996999999--999999
No 111
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=67.11 E-value=6.2 Score=18.41 Aligned_cols=159 Identities=14% Similarity=0.148 Sum_probs=79.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++| ..|++..|+--|.|.+..|.. .+-+|++.+=.. +..+.++ ..+.+++.+.+| .+.++|+++++++...
T Consensus 28 ~GK-valVTGas~GIG~aiA~~la~-~Ga~V~~~~~~~~~l~~~~~-----~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 28 AGK-VAIVTGAGAGIGLAVARRLAD-EGCHVLCADIDGDAADAAAT-----KIGCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp TTC-EEEETTTTSTHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH-----HHCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCC-EEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-----HHCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 999-899938787899999999998-79999999798899999999-----82996489996389999999999999997
Q ss_pred HH----HHCCC------CCCCCCCCCHHHCCCC---HHHHHH-HHH-HHCC--CCCCEEEEEECCCHHHH-HHHHHHHHC
Q ss_conf 54----31358------3113455654440110---558999-998-7447--78873899634657887-886677750
Q gi|254780465|r 208 VF----FCHSV------NLSGINSINWARIMAQ---IVYYFV-SSI-ALGS--PNRNISFSVPTGNFGDI-FAGYMAKMM 269 (469)
Q Consensus 208 ~~----~~~~~------~l~s~NSIN~~Ril~Q---~vyYf~-a~~-~~~~--~~~~i~f~VPtGNfGni-~Ag~~Ak~M 269 (469)
-. +...- .+.....=.|-|++-- -+|+.. +.+ .+.+ .++-|+++=-.|..|.. .+.|-|-|.
T Consensus 101 ~G~iDiLVnNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa 180 (277)
T 3gvc_A 101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKA 180 (277)
T ss_dssp HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCHHHHHHHH
T ss_conf 39998999899889999904499999999999981999999999999887659944999834665678999778999999
Q ss_pred CCCCCEEEEECCCCCHHHHHHHCCCHHCC-CCCCCCCCCC
Q ss_conf 89877058723676335677532220102-3455656420
Q gi|254780465|r 270 GLPIEKLIIATNENDTLVRMFDMGMYRPE-IVMETTSPAM 308 (469)
Q Consensus 270 GLPI~kli~AtN~NdiL~rf~~tG~y~~~-~~~~T~SpsM 308 (469)
|+- -|.|.+.. +|.+. -.+.+++|.+
T Consensus 181 al~------------~ltk~lA~-ela~~gIrVN~V~PG~ 207 (277)
T 3gvc_A 181 GII------------QLSRITAA-ELRSSGIRSNTLLPAF 207 (277)
T ss_dssp HHH------------HHHHHHHH-HHGGGTEEEEEEEECS
T ss_pred HHH------------HHHHHHHH-HHHHHCEEEEEEEECC
T ss_conf 999------------99999999-8604191999996288
No 112
>1vp8_A Hypothetical protein AF0103; NP_068944.1, structural genomics, JCSG, joint center for structural genomics, PSI; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus dsm 4304} SCOP: c.49.1.2
Probab=66.99 E-value=4.7 Score=19.24 Aligned_cols=50 Identities=18% Similarity=0.272 Sum_probs=28.6
Q ss_pred CCCCHHHHHHHHHHHHHHC---CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 0682388899999999731---7982079971665404679998616678559997
Q gi|254780465|r 111 FKDIAMQFIAELMDHILEE---RDHYITIVGATSGDTGAAAIKAFAGKKRINMYIL 163 (469)
Q Consensus 111 FKD~a~q~l~~~~~~~l~~---~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vl 163 (469)
|..-|-+=.-..++...++ .+=+.+|+.-|||+|+-.+++.+++ +++++.
T Consensus 20 F~~~G~~NT~~tl~~a~erA~e~gIk~iVVASssG~TA~k~~e~~kg---~~lVvV 72 (201)
T 1vp8_A 20 FNKPGRENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEG---LEVVVV 72 (201)
T ss_dssp ESSCSGGGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTT---CEEEEE
T ss_pred ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC---CCEEEE
T ss_conf 76888313899999999999986997799970886699999997459---829999
No 113
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=66.80 E-value=3.9 Score=19.78 Aligned_cols=74 Identities=18% Similarity=0.222 Sum_probs=45.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEE-CCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-6760332131134-47870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTS-EASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~-~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|-+|++| -|.|.+..|.. .+.+|++.+-.. +..++.+ ++... ...+++.+.+| .+-++++++++++..
T Consensus 31 kgKvalITGas~G-IG~aiA~~la~-~Ga~Vv~~~r~~~~l~~~~~-~l~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 31 RDRLALVTGASGG-IGAAVARALVQ-QGLKVVGCARTVGNIEELAA-ECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9988999277878-99999999998-79999999798899999999-998569995199997458999999999999999
No 114
>1bdb_A CIS-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase; NAD-dependent oxidoreductase, short-chain alcohol dehydrogenase, PCB degradation; HET: NAD; 2.00A {Pseudomonas SP} SCOP: c.2.1.2
Probab=66.17 E-value=6.4 Score=18.29 Aligned_cols=72 Identities=13% Similarity=0.222 Sum_probs=47.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|. .+++..|+--|.|.+..|.. .+-+|++.+-.. ..+++ .....+.+++.+.+| .+-++|+++++++...
T Consensus 4 ~gKv-alITGas~GIG~aiA~~la~-~Ga~V~i~~r~~--~~l~~--~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (277)
T 1bdb_A 4 KGEA-VLITGGASGLGRALVDRFVA-EGAKVAVLDKSA--ERLAE--LETDHGDNVLGIVGDVRSLEDQKQAASRCVAR 76 (277)
T ss_dssp TTCE-EEEETTTSHHHHHHHHHHHH-TTCEEEEEESCH--HHHHH--HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCE-EEEECCCCHHHHHHHHHHHH-CCCEEEEEECCH--HHHHH--HHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9989-99948787999999999998-899999997998--99999--99975997799982379999999999999998
No 115
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, antibiotic biosynthesis, NADPH; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=65.99 E-value=6.5 Score=18.26 Aligned_cols=73 Identities=12% Similarity=0.252 Sum_probs=47.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
.|..|++..|+--|.|.+..|.. .+-+|++..-.. +.-++.+ ++. ..+.+++.+.+| .+-++++++++++...
T Consensus 7 gKvalITGas~GIG~aiA~~la~-~Ga~V~~~~r~~~~l~~~~~-~l~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 81 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAA-EGAAVAIAARRVEKLRALGD-ELT-AAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHH-HCCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 89899938787899999999998-79989999898999999999-998-54993899991089999999999999998
No 116
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber dsm 13855}
Probab=65.96 E-value=1.8 Score=22.18 Aligned_cols=131 Identities=11% Similarity=0.126 Sum_probs=63.9
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC------CCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHC
Q ss_conf 20799716654046799986166785599973577------676033213113447870899717965888999999750
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG------RISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFS 206 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g------~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~ 206 (469)
++.|++| |..|++.+......+-++-++||=-. ..-+++. ..+..+.+.... ..+++++|..
T Consensus 2 KV~IiGa--G~VG~~~a~~l~~~~~~~el~L~Di~~~~a~g~a~DL~~--~~~~~~~~~~v~-~~~~~~~~~~------- 69 (314)
T 3nep_X 2 KVTVIGA--GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRE--SSPIHGFDTRVT-GTNDYGPTED------- 69 (314)
T ss_dssp EEEEECC--SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHH--HHHHHTCCCEEE-EESSSGGGTT-------
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHC--CCCCCCCCCEEE-ECCCCHHCCC-------
T ss_conf 7999996--989999999998379998699976899823009988667--365478887798-5575000158-------
Q ss_pred CHHHHCCCCCCCCCC----CCHHHCCCCHHHHHHHH-HHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 154313583113455----65444011055899999-874477887389963465788788667775089877058723
Q gi|254780465|r 207 DVFFCHSVNLSGINS----INWARIMAQIVYYFVSS-IALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIAT 280 (469)
Q Consensus 207 D~~~~~~~~l~s~NS----IN~~Ril~Q~vyYf~a~-~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~At 280 (469)
.++ .-+++..+ .+-..++..-+-.|-.. .++.+....-.+.|- +|=-|+.+.++.|..|+|=+|++...
T Consensus 70 -aDi---vvi~ag~~r~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivv-sNPvd~~~~~~~k~sg~~~~rv~G~g 143 (314)
T 3nep_X 70 -SDV---CIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVV-ANPLDVMTYVAYEASGFPTNRVMGMA 143 (314)
T ss_dssp -CSE---EEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEEC-CSSHHHHHHHHHHHHTCCGGGEEECC
T ss_pred -CCE---EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC-CCCCHHHHHHHHHHCCCCCCCEEEEC
T ss_conf -635---753156788989898999998776878999877404998469963-78613899999995699952578732
No 117
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=65.81 E-value=6.5 Score=18.24 Aligned_cols=75 Identities=13% Similarity=0.207 Sum_probs=47.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC-CHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 17982079971665404679998616678559997357767-6033213113447870899717-965888999999750
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI-SVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v-S~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
-++|...|-+| |+--|.|.+..|.. .+-+|++.+-...- ...++ .....+.+++.+.+| .+.++++++++++..
T Consensus 32 L~gKvalVTGa-s~GIG~aiA~~la~-~Ga~V~i~~r~~~~~~~~~~--~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~ 107 (279)
T 3ctm_A 32 LKGKVASVTGS-SGGIGWAVAEAYAQ-AGADVAIWYNSHPADEKAEH--LQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp CTTCEEEETTT-TSSHHHHHHHHHHH-HTCEEEEEESSSCCHHHHHH--HHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH--HHHHCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 89998999487-86999999999998-79989999688688999999--9986599569999527999999999999999
Q ss_pred C
Q ss_conf 1
Q gi|254780465|r 207 D 207 (469)
Q Consensus 207 D 207 (469)
.
T Consensus 108 ~ 108 (279)
T 3ctm_A 108 D 108 (279)
T ss_dssp H
T ss_pred H
T ss_conf 8
No 118
>1g5m_A Protein (apoptosis regulator BCL-2 with putative flexible loop replaced with A portion...; NMR {Homo sapiens} SCOP: f.1.4.1 PDB: 1gjh_A 1ysw_A* 2o21_A* 2o22_A*
Probab=65.49 E-value=4.1 Score=19.64 Aligned_cols=31 Identities=32% Similarity=0.673 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 5888999999750154313583113455654440110558999998
Q gi|254780465|r 194 FDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 194 FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
.+..+.++.++|.| .||||||++ .|+|-+.+
T Consensus 86 ~~~f~~Va~elF~d-------------ginWGRIVa--l~~F~g~l 116 (166)
T 1g5m_A 86 RGRFATVVEELFRD-------------GVNWGRIVA--FFEFGGVM 116 (166)
T ss_dssp HHHHHHHHHHHTTS-------------CCCHHHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHCCC-------------CCCHHHHHH--HHHHHHHH
T ss_conf 99999999998479-------------998999999--99999999
No 119
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=64.04 E-value=6.9 Score=18.08 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=37.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 798207997166540467999861667855999735776760332131134478708997179658889999997
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNL 204 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~ 204 (469)
..+++.|+|| |++|...+++++..++-+++-|. .+-++++ +..++-+.|-| .+|...++++-
T Consensus 3 ~k~rvlI~Ga--g~~g~~l~~~l~~~~~y~vvgfi-----D~d~~~~-----g~~i~gi~V~~-~~~l~~~i~~~ 64 (141)
T 3nkl_A 3 AKKKVLIYGA--GSAGLQLANMLRQGKEFHPIAFI-----DDDRKKH-----KTTMQGITIYR-PKYLERLIKKH 64 (141)
T ss_dssp CCEEEEEECC--SHHHHHHHHHHHHSSSEEEEEEE-----CSCGGGT-----TCEETTEEEEC-GGGHHHHHHHH
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCCCEEEEEE-----ECCCCCC-----EEEECCCCCCC-HHHHHHHHHHC
T ss_conf 8777999877--98999999999878996699999-----5786414-----14867820366-87877888646
No 120
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=63.68 E-value=7.1 Score=17.97 Aligned_cols=72 Identities=14% Similarity=0.243 Sum_probs=45.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH--CCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 98207997166540467999861667855999735776760332--13113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQ--KQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~--~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+.|..|++..|+--|.|.+..|. ..+-+|++.+=.. ...++ .++. ...+++.+.+| .+.++|+++++++...
T Consensus 15 ~gKvalVTGas~GIG~aiA~~la-~~Ga~V~i~~r~~--~~~~~~~~~~~--~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 89 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFV-RYGAKVVIADIAD--DHGQKVCNNIG--SPDVISFVHCDVTKDEDVRNLVDTTIAK 89 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCH--HHHHHHHHHHC--CTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCH--HHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99989994868789999999999-8799899997988--99999999835--8996799985789999999999999998
No 121
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=63.59 E-value=7.2 Score=17.96 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=47.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHC-CCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 820799716654046799986166785599973577-67603321-3113447870899717-965888999999750
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQK-QMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~-qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
.|..+++..|+--|.|.+..|.. .+-+|++.+=.. +..+.++. +-....+.+++.+.+| .+.++|+++++++..
T Consensus 6 gKvalITGas~GIG~aiA~~la~-~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQ-EGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 98799937686999999999998-799899998988999999999996588888579999028999999999999999
No 122
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=63.35 E-value=7.2 Score=17.93 Aligned_cols=189 Identities=14% Similarity=0.193 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCH-HHHH
Q ss_conf 999999999863047667860477248825466213898120682388899999999731798207997166540-4679
Q gi|254780465|r 70 SKLRDIVNRSYHCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDT-GAAA 148 (469)
Q Consensus 70 ~~l~~ii~~ay~~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDT-GsAa 148 (469)
+.+..++.+..-..-.+...++.......+|. +|-|||++=|--.. +.+- +++.++++++.+++| || =.||
T Consensus 73 ~~i~kiv~~eL~~llg~~~~~~~~~~~~p~Vi-~lvG~~GvGKTTT~---aKLA-~~~~~~g~kv~Lva~---Dt~R~aA 144 (504)
T 2j37_W 73 KMIQHAVFKELVKLVDPGVKAWTPTKGKQNVI-MFVGLQGSGKTTTC---SKLA-YYYQRKGWKTCLICA---DTFRAGA 144 (504)
T ss_dssp HHHHHHHHHHHHHHHCCCCCCCCCCSS--EEE-EEECSTTSSHHHHH---HHHH-HHHHHTTCCEEEEEE---CCSSSHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE-EEECCCCCCCCCCH---HHHH-HHHHHHHCCCCCCCC---CCCCHHH
T ss_conf 99999999999998486654344356897599-99668788865508---9999-999860020200001---2367779
Q ss_pred HHHH---CCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC--CCHHHHHHHHHHHHCC-HHHHC-CCCCCCCCC
Q ss_conf 9986---166785599973577676033213113447870899717--9658889999997501-54313-583113455
Q gi|254780465|r 149 IKAF---AGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ--SSFDDCQKIVKNLFSD-VFFCH-SVNLSGINS 221 (469)
Q Consensus 149 ~~a~---~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~--G~FDDcq~~Vk~~f~D-~~~~~-~~~l~s~NS 221 (469)
++-. ...-++.++.-+.......+-+.-+......+.-+|=|| |----=..+..++-.= ..... ...|+ +.|
T Consensus 145 veQLk~~a~~~~vp~~~~~~~~dp~~i~~~~~~~ak~~~~DvIiIDTAGR~~~d~~lm~El~~i~~~~~P~e~llV-lda 223 (504)
T 2j37_W 145 FDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYV-MDA 223 (504)
T ss_dssp HHHHHHHHHHHTCCEEECCCCSCHHHHHHHHHHHHHHTTCCEEEEEECCCCTTCHHHHHHHHHHHHHHCCSEEEEE-EET
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE-CCH
T ss_conf 9999998730477655754434768899999999986699889955867653179999999987601586313552-100
Q ss_pred CCHHHCCCCHH----HHHHHHHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 65444011055----89999987447788738996--346578878866777508987705872
Q gi|254780465|r 222 INWARIMAQIV----YYFVSSIALGSPNRNISFSV--PTGNFGDIFAGYMAKMMGLPIEKLIIA 279 (469)
Q Consensus 222 IN~~Ril~Q~v----yYf~a~~~~~~~~~~i~f~V--PtGNfGni~Ag~~Ak~MGLPI~kli~A 279 (469)
..+|-+ --|+..+.+. .+.+.= =+...|.+++ +...-|+|| ++|..
T Consensus 224 -----~~Gq~a~~~a~~F~~~v~i~----gvIlTKlDg~argG~aLS--i~~~t~~PI-~fig~ 275 (504)
T 2j37_W 224 -----SIGQACEAQAKAFKDKVDVA----SVIVTKLDGHAKGGGALS--AVAATKSPI-IFIGT 275 (504)
T ss_dssp -----TCCTTHHHHHHHHHHHHCCC----CEEEECTTSCCCCTHHHH--HHHHHCCCE-EEEEC
T ss_pred -----HHCHHHHHHHHHHHHHCCCC----EEEEEEECCCCCCHHHHH--HHHHHCCCC-EEEEE
T ss_conf -----20234899999987542666----057751136776146744--899878696-78752
No 123
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=63.33 E-value=7.2 Score=17.93 Aligned_cols=73 Identities=16% Similarity=0.236 Sum_probs=46.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CC----CHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHH
Q ss_conf 820799716654046799986166785599973577-67----6033213113447870899717-96588899999975
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RI----SVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLF 205 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~v----S~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f 205 (469)
.+..|++..|+--|.|.+..|.. .+-+|++.+-.. +. .++++ +.....+.+++.+.+| .+.++|+++|+++-
T Consensus 18 gKvalITGgs~GIG~aiA~~la~-~Ga~V~i~~r~~~~l~~~~~el~~-~~~~~~~~~~~~~~~Dvt~~~~v~~~v~~~~ 95 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLE-LGSNVVIASRKLERLKSAADELQA-NLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHH-TSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 79899938986899999999998-799899997988999999999984-3042569659999745899999999999999
Q ss_pred C
Q ss_conf 0
Q gi|254780465|r 206 S 206 (469)
Q Consensus 206 ~ 206 (469)
.
T Consensus 96 ~ 96 (303)
T 1yxm_A 96 D 96 (303)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 124
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=63.07 E-value=7.3 Score=17.90 Aligned_cols=75 Identities=9% Similarity=0.131 Sum_probs=46.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH--CCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 798207997166540467999861667855999735776760332--13113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQ--KQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~--~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
.++|+.|++..|.--|-|.+..|....+-+|++. =.+ ....++ +++. ..+.+++.+.+| .+.++++++++++..
T Consensus 2 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vvl~-~r~-~~~~~~~~~~l~-~~~~~~~~~~~Dvs~~~sv~~~~~~~~~ 78 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLT-ARD-VTRGQAAVQQLQ-AEGLSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEE-ESS-HHHHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE-ECC-HHHHHHHHHHHH-HCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 8982899877887899999999998189989999-799-899999999998-5599579999328999999999999999
Q ss_pred C
Q ss_conf 1
Q gi|254780465|r 207 D 207 (469)
Q Consensus 207 D 207 (469)
+
T Consensus 79 ~ 79 (276)
T 1wma_A 79 E 79 (276)
T ss_dssp H
T ss_pred H
T ss_conf 7
No 125
>1r2d_A Apoptosis regulator BCL-X; monomeric, alpha-helical; 1.95A {Homo sapiens} SCOP: f.1.4.1 PDB: 2b48_A 1r2i_A 1r2h_A 1r2g_A 1r2e_A 1bxl_A 1lxl_A 1maz_A 3cva_X 1ysg_A* 1ysi_A* 1ysn_A* 2o1y_A* 2yxj_A* 1g5j_A
Probab=63.01 E-value=5 Score=19.04 Aligned_cols=32 Identities=31% Similarity=0.830 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 65888999999750154313583113455654440110558999998
Q gi|254780465|r 193 SFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 193 ~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
.++-.+.+++++|.| .||||||++ .|+|-+.+
T Consensus 119 a~~~F~~Va~elF~d-------------ginWGRIVa--L~~F~g~L 150 (218)
T 1r2d_A 119 AYQSFEQVVNELFRD-------------GVNWGRIVA--FFSFGGAL 150 (218)
T ss_dssp CHHHHHHHHGGGGTT-------------CCCHHHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHHCC-------------CCCHHHHHH--HHHHHHHH
T ss_conf 899999999999547-------------996578899--99999999
No 126
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=62.88 E-value=7.4 Score=17.88 Aligned_cols=12 Identities=17% Similarity=0.163 Sum_probs=6.2
Q ss_pred CHHHHHHHHHHH
Q ss_conf 089999998752
Q gi|254780465|r 327 NSLLVKEAFYSL 338 (469)
Q Consensus 327 d~~~v~~~m~~l 338 (469)
++.++.++.++-
T Consensus 272 nA~~lA~~L~~h 283 (398)
T 1gc0_A 272 NAQVLAEFLARQ 283 (398)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999987428
No 127
>3fdl_A Apoptosis regulator BCL-X; helical bundle, peptide-protein complex, apoptosis, alternative splicing, membrane, mitochondrion, nucleus, transmembrane; 1.78A {Homo sapiens} PDB: 3fdm_A 3inq_A* 3io8_A 2p1l_A 2o2m_A* 2o2n_A*
Probab=62.70 E-value=5.9 Score=18.53 Aligned_cols=30 Identities=33% Similarity=0.842 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf 588899999975015431358311345565444011055899999
Q gi|254780465|r 194 FDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSS 238 (469)
Q Consensus 194 FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~ 238 (469)
..-...+++++|.| .||||||++ .|+|-+.
T Consensus 69 ~~~f~~Va~elF~d-------------ginWGRIva--l~~F~g~ 98 (158)
T 3fdl_A 69 YQSFEQVVNELFRD-------------GVNWGRIVA--FFSFGGA 98 (158)
T ss_dssp HHHHHHHHHHHTTT-------------CCCHHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHCC-------------CCCHHHHHH--HHHHHHH
T ss_conf 99999999998048-------------996699999--9999999
No 128
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=62.48 E-value=7.4 Score=17.88 Aligned_cols=72 Identities=19% Similarity=0.282 Sum_probs=41.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+|.+.|-+|++| -|.|.+..|.. .+-+|++..=.. +..++.+ ++. ...++..+.++ .+-++++.+++++..+
T Consensus 21 ~kTvLVTGas~G-IG~aiA~~la~-~Ga~Vvl~~r~~e~l~~~~~-el~--~~~~~~~~~~dv~~~~~~~~~~~~~~~~ 94 (272)
T 2nwq_A 21 SSTLFITGATSG-FGEACARRFAE-AGWSLVLTGRREERLQALAG-ELS--AKTRVLPLTLDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp CCEEEESSTTTS-SHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHT--TTSCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred CCEEEEECCCCH-HHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHH--CCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 994999875879-99999999998-79989999899999999999-850--4787799995122278888876556876
No 129
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=62.24 E-value=7.6 Score=17.80 Aligned_cols=11 Identities=9% Similarity=0.132 Sum_probs=5.5
Q ss_pred CHHHHHHHHHH
Q ss_conf 08999999875
Q gi|254780465|r 327 NSLLVKEAFYS 337 (469)
Q Consensus 327 d~~~v~~~m~~ 337 (469)
++.++.++.++
T Consensus 258 nA~~lA~~L~~ 268 (386)
T 1cs1_A 258 NAQAIVKYLQT 268 (386)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
T ss_conf 99999998876
No 130
>1k3k_A Functional anti-apoptotic factor VBCL-2 homolog; solution structure, apoptosis; NMR {Human herpesvirus 8} SCOP: f.1.4.1
Probab=61.36 E-value=5.5 Score=18.78 Aligned_cols=12 Identities=33% Similarity=0.897 Sum_probs=9.0
Q ss_pred CCCCHHHCCCCH
Q ss_conf 556544401105
Q gi|254780465|r 220 NSINWARIMAQI 231 (469)
Q Consensus 220 NSIN~~Ril~Q~ 231 (469)
..+|||||++=.
T Consensus 80 G~~NWGRIVaLf 91 (158)
T 1k3k_A 80 GNMNWGRALAIL 91 (158)
T ss_dssp CSCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
T ss_conf 998689999999
No 131
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=60.82 E-value=8 Score=17.63 Aligned_cols=10 Identities=10% Similarity=0.026 Sum_probs=4.8
Q ss_pred CHHHHHHHHH
Q ss_conf 0899999987
Q gi|254780465|r 327 NSLLVKEAFY 336 (469)
Q Consensus 327 d~~~v~~~m~ 336 (469)
++.++.++++
T Consensus 263 nA~~lA~~L~ 272 (393)
T 1n8p_A 263 SANKIAEFLA 272 (393)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
T ss_conf 9999999998
No 132
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* 1a27_A*
Probab=60.55 E-value=8.1 Score=17.60 Aligned_cols=72 Identities=4% Similarity=0.120 Sum_probs=42.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC----CCCHHHH--CCCEEECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 820799716654046799986166785599973577----6760332--13113447870899717-9658889999997
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG----RISVVQQ--KQMTTSEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g----~vS~~Q~--~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
|++.+++..|+--|.|.+..|... +-++++.+=.. ....+++ +++.+ .+.+++.+.+| .+.++++.+++++
T Consensus 2 kKVvlITGassGIG~a~A~~la~~-Ga~v~~v~~~~r~~~~~~~l~e~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASD-PSQSFKVYATLRDLKTQGRLWEAARALAC-PPGSLETLQLDVRDSKSVAAARERV 79 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTC-TTCCEEEEEEESCGGGTHHHHHHHHHTTC-CTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCCEEEEEEECCCHHHHHHHHHHHHHHHC-CCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 988999148868999999999987-99768999862764656889999999751-6885899974479999999999998
Q ss_pred H
Q ss_conf 5
Q gi|254780465|r 205 F 205 (469)
Q Consensus 205 f 205 (469)
.
T Consensus 80 ~ 80 (327)
T 1jtv_A 80 T 80 (327)
T ss_dssp T
T ss_pred H
T ss_conf 6
No 133
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=60.34 E-value=8.1 Score=17.58 Aligned_cols=192 Identities=11% Similarity=0.148 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCH-HHH
Q ss_conf 8999999999863047667860477248825466213898120682388899999999731798207997166540-467
Q gi|254780465|r 69 SSKLRDIVNRSYHCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDT-GAA 147 (469)
Q Consensus 69 ~~~l~~ii~~ay~~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDT-GsA 147 (469)
.+.+.+++.+.....-.+...|+..-....++ =||-|||++=|--- ++.+- +++.++++++.+++ .|| -+|
T Consensus 69 ~~~~~~~l~~~L~~~l~~~~~~~~~~~~~p~v-i~lvG~~G~GKTTt---~aKLA-~~~~~~g~kv~l~a---~Dt~R~a 140 (297)
T 1j8m_F 69 REWFIKIVYDELSNLFGGDKEPKVIPDKIPYV-IMLVGVQGTGKTTT---AGKLA-YFYKKKGFKVGLVG---ADVYRPA 140 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCCCCSCSSSSEE-EEEECSSCSSTTHH---HHHHH-HHHHHTTCCEEEEE---CCCSSSH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE-EEEECCCCCCCHHH---HHHHH-HHHHHCCCCCCEEE---CCCCCHH
T ss_conf 99999999999998735553223235789879-99746766662037---99999-99996797641121---1565444
Q ss_pred HHHH---HCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC--CC--HHHHHHHHHHHHCCHHHHCCCCCCCCC
Q ss_conf 9998---6166785599973577676033213113447870899717--96--588899999975015431358311345
Q gi|254780465|r 148 AIKA---FAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ--SS--FDDCQKIVKNLFSDVFFCHSVNLSGIN 220 (469)
Q Consensus 148 a~~a---~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~--G~--FDDcq~~Vk~~f~D~~~~~~~~l~s~N 220 (469)
|++- +...-++.++.-+.......+-..-+......+...+=|| |- .|+-+.+..++-.=...........+-
T Consensus 141 A~eQL~~~a~~~~v~~~~~~~~~d~~~v~~~a~~~~~~~~~D~vlIDTaGR~~~~~~~~~~~el~~i~~~~~p~e~~LVl 220 (297)
T 1j8m_F 141 ALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVI 220 (297)
T ss_dssp HHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 89999998631395154237777767899999999985599889954877675205565689999998636976589986
Q ss_pred CCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHCCCCCC
Q ss_conf 56544401105589999987447788738996--3465788788667775089877
Q gi|254780465|r 221 SINWARIMAQIVYYFVSSIALGSPNRNISFSV--PTGNFGDIFAGYMAKMMGLPIE 274 (469)
Q Consensus 221 SIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~V--PtGNfGni~Ag~~Ak~MGLPI~ 274 (469)
+-+.+.=.-..+.-|+.+..+. .+.+.= =|..+|.+++ ++...|+||.
T Consensus 221 da~~g~~~~~~~~~f~~~~~~~----glIlTKlD~t~~~G~~ls--~~~~~~~Pi~ 270 (297)
T 1j8m_F 221 DASIGQKAYDLASKFNQASKIG----TIIITKMDGTAKGGGALS--AVAATGATIK 270 (297)
T ss_dssp EGGGGGGHHHHHHHHHHTCTTE----EEEEECGGGCTTHHHHHH--HHHTTTCCEE
T ss_pred ECCCCCCHHHHHHHHHHHCCCC----EEEEEEECCCCCCCHHHH--HHHHHCCCEE
T ss_conf 1456840799999987635998----799951028885009999--9999896979
No 134
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=59.74 E-value=8.3 Score=17.51 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=46.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|. .|++..|+--|.|.+..|.. .+.+|++.+-. -...++. ....+.+++.+.+| .+.|+++++++++...
T Consensus 8 ~gK~-alVTGas~GIG~aia~~la~-~Ga~V~~~~r~--~~~l~~~--~~~l~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (261)
T 3n74_A 8 EGKV-ALITGAGSGFGEGMAKRFAK-GGAKVVIVDRD--KAGAERV--AGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp TTCE-EEEETTTSHHHHHHHHHHHH-TTCEEEEEESC--HHHHHHH--HHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCE-EEEECCCCHHHHHHHHHHHH-CCCEEEEEECC--HHHHHHH--HHHHCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9998-99938887899999999998-79989999899--9999999--9983896799996279999999999999998
No 135
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=59.33 E-value=8.5 Score=17.46 Aligned_cols=75 Identities=12% Similarity=0.244 Sum_probs=47.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEE--CCCCEEEEEEC-CCHHHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577-6760332131134--47870899717-96588899999975
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTS--EASNINVIAVQ-SSFDDCQKIVKNLF 205 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~--~~~Nv~~i~v~-G~FDDcq~~Vk~~f 205 (469)
+.+++.|++..|+--|.|.+..|. ..+-+|++..-.. +..++++ ++... ...++..+.+| .+.++++++++++.
T Consensus 5 ~~k~vAlITGas~GIG~aia~~la-~~G~~Vi~~~r~~~~l~~~~~-~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLA-TDGYRVVLIARSKQNLEKVHD-EIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHH-HHTCEEEEEESCHHHHHHHHH-HHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 999999995697399999999999-879989999898999999999-999835888745899801899999999999999
Q ss_pred C
Q ss_conf 0
Q gi|254780465|r 206 S 206 (469)
Q Consensus 206 ~ 206 (469)
.
T Consensus 83 ~ 83 (250)
T 3nyw_A 83 Q 83 (250)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 136
>3ilc_A BCL-2-like protein 1; apoptosis, BH3 domain, alternative splicing, cytoplasm, membrane, mitochondrion, transmembrane; 1.64A {Mus musculus} PDB: 3ihd_A 2bzw_A 1pq1_A 1pq0_A 3ihc_A 3iih_A 1af3_A 3ihf_A 3ilb_A 3iig_A 3ihe_A 2pon_B
Probab=59.17 E-value=6.6 Score=18.22 Aligned_cols=33 Identities=27% Similarity=0.795 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 965888999999750154313583113455654440110558999998
Q gi|254780465|r 192 SSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 192 G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
..++-.+.+++++|. +.|||+||++ .|.|-+.+
T Consensus 119 ~a~~~F~~Va~elF~-------------dginWGRIVa--l~~F~g~L 151 (197)
T 3ilc_A 119 TAYQSFEQVVNELFR-------------DGVNWGRIVA--FFSFGGAL 151 (197)
T ss_dssp CCHHHHHHHHGGGGT-------------TCCCHHHHHH--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHC-------------CCCCHHHHHH--HHHHHHHH
T ss_conf 289999999999954-------------7995788899--99999999
No 137
>2qne_A Putative methyltransferase; ZP_00558420.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.30A {Desulfitobacterium hafniense Y51}
Probab=58.97 E-value=5.2 Score=18.94 Aligned_cols=191 Identities=16% Similarity=0.154 Sum_probs=94.9
Q ss_pred HHHHHCCCCCCEEE-EEE------CCC---------HHHHHHHHHHHHCCCCCCEEE--EECCCCCHHHHHHH--CCCHH
Q ss_conf 99874477887389-963------465---------788788667775089877058--72367633567753--22201
Q gi|254780465|r 237 SSIALGSPNRNISF-SVP------TGN---------FGDIFAGYMAKMMGLPIEKLI--IATNENDTLVRMFD--MGMYR 296 (469)
Q Consensus 237 a~~~~~~~~~~i~f-~VP------tGN---------fGni~Ag~~Ak~MGLPI~kli--~AtN~NdiL~rf~~--tG~y~ 296 (469)
++.|+.+++-|+.| ..| ||+ .-+..++-+|+..|||-..-- ..++..|.=.-+=+ +-...
T Consensus 275 vl~Qlv~PGaPviyG~~~~~~Dmrtga~~~GspE~~l~~~a~aqmar~y~LP~~~~~g~tdsk~~DaQAg~E~~~~~~~~ 354 (495)
T 2qne_A 275 SLAQSINPGTPVIYGSTSALSDMRSGSLSIGSPECALFISASAQLARFYGVPSRSGGGLNDSKTVDAQAGYESMMTLMAA 354 (495)
T ss_dssp HHHHHHSTTCCEEEEECCEEECTTTCSEECSSHHHHHHHHHHHHHHHHHTSCEEECCSCCCCSSSSHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99998099997798036444331118878898799999999999998729876664455557896589999999999999
Q ss_pred C---CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHH-HHHH
Q ss_conf 0---23455656420013401378899987097089999998752026510552022110001213421388999-9999
Q gi|254780465|r 297 P---EIVMETTSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDV-NSVI 372 (469)
Q Consensus 297 ~---~~~~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet-~~~I 372 (469)
. -..+---+=-|+=+....+|.|+ ++++.+..++..+.+-.|+|+.. ++.|
T Consensus 355 ~~~Gan~i~h~~G~l~~~l~~S~ek~v-------------------------iD~E~lg~~~r~~~gi~v~detla~d~I 409 (495)
T 2qne_A 355 NLTGVNFVLHTAGILQYFMAMSYEKFI-------------------------MDDEIAGMLLHYMKGYTFDEDGMAFDVI 409 (495)
T ss_dssp HHTTCSEEEEEESEEGGGTEECHHHHH-------------------------HHHHHHHHHHHHHHCCCCSHHHHCHHHH
T ss_pred HHCCCCCEECCHHHHHCCCCCCHHHHH-------------------------HHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 971965200557665303105799999-------------------------8499999999970699889305579999
Q ss_pred HHHHHHCCCEECCCHHHHHHHHHHHHHCCCCCEEEEEC--CCCCC-CHHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCC
Q ss_conf 99998639598383399999999987479983999971--88434-9888999808798889889887417211010689
Q gi|254780465|r 373 KSVLEKSNYLVDPHTAVGIHAALACRKSSSTPMVTLAT--AHPSK-FPDTVKAASGIVPDCPISLEQMMRRPENCKVMNK 449 (469)
Q Consensus 373 k~~y~~~gyiiDPHTAvG~~aa~~~~~~~~~p~VvLAT--AHPaK-Fpe~V~~Aig~~~~~P~~L~~l~~k~e~~~~l~n 449 (469)
+++=..-+|+-.|||---+.-. + -.|.+.--. ..|.| =+++.++|. ++.+++++.-+ -..+++
T Consensus 410 ~~VgpgGhfLg~~hT~~~~~~~--~----~~P~l~dr~~~e~W~~~~~d~~~rA~-------~~~~~iL~~~~-~p~ld~ 475 (495)
T 2qne_A 410 EKVGPGGHFLTQKHTRKNHKRE--F----YTPTLSDRSAYDTWAKEKLETKQRAH-------ARWQQILANYV-PPALDP 475 (495)
T ss_dssp HHHCTTCCSTTSHHHHHHHHHH--C----CCCSSCCCCCHHHHTTTCCCHHHHHH-------HHHHHHHHHCC-CCCCCH
T ss_pred HHHCCCCCCCCCHHHHHHHHHC--C----CCCCCCCCCCHHHHHHCCCCHHHHHH-------HHHHHHHHHCC-CCCCCH
T ss_conf 8657999888978999998643--1----68855343497889847956999999-------99999997268-999999
Q ss_pred CH-HHHHHHHHHHHHHHC
Q ss_conf 99-999999996115520
Q gi|254780465|r 450 NI-DEIKKFIKKRNMESK 466 (469)
Q Consensus 450 d~-~~ik~fI~~k~~~~~ 466 (469)
++ +++++||.++..|.-
T Consensus 476 ~i~~~l~~~v~~r~~e~~ 493 (495)
T 2qne_A 476 EIDAKLQAFIAQRGKEVG 493 (495)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 999999999999987328
No 138
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=58.50 E-value=8.7 Score=17.37 Aligned_cols=70 Identities=20% Similarity=0.248 Sum_probs=41.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEE--CCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 982079971665404679998616678559997--35776760332131134478708997179658889999997
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYIL--FPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNL 204 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vl--yP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~ 204 (469)
++++ +++.-||-.|++.+..+... +-+|.+| .|.+.-...+..........++.+ +.|+++|-..+.+.+
T Consensus 4 k~kI-LVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~l~~~gv~v--~~~D~~d~~~l~~a~ 75 (308)
T 1qyc_A 4 RSRI-LLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANI--VHGSIDDHASLVEAV 75 (308)
T ss_dssp CCCE-EEESTTSTTHHHHHHHHHHT-TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEE--ECCCTTCHHHHHHHH
T ss_pred CCEE-EEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEE--EEEECCCHHHHHHHH
T ss_conf 9979-99898838999999999978-896999988886555677777777650389589--996465435568875
No 139
>3nnp_A Xometc, cystathionine gamma-lyase-like protein; native, Cys-Met metabolism PLP-dependent ENZY family, pyridoxal-phosphate (PLP; HET: PLP; 2.29A {Xanthomonas oryzae PV} PDB: 3e6g_A*
Probab=58.49 E-value=8.7 Score=17.37 Aligned_cols=26 Identities=27% Similarity=0.344 Sum_probs=15.0
Q ss_pred CCEECCCCC--CCCCCHHHH-HHCCCCCC
Q ss_conf 932617898--888888999-86156787
Q gi|254780465|r 1 MKYISTRNV--DLSLGFCDT-ILSGLATD 26 (469)
Q Consensus 1 M~y~STRg~--~~~~~f~~a-~~~Gla~D 26 (469)
|.+-+++.+ +...+|+.. +..|..+|
T Consensus 4 m~~~~~~~~~~~~~~~~~T~~vh~g~~~~ 32 (400)
T 3nnp_A 4 MSNRTTHSHDGDRALSLATLAIHGGQSPD 32 (400)
T ss_dssp -------------CCCHHHHHHHTTCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHEECCCCCC
T ss_conf 88988777777678887276231898888
No 140
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=58.33 E-value=3.6 Score=20.06 Aligned_cols=16 Identities=19% Similarity=0.158 Sum_probs=7.8
Q ss_pred EECCCCCCCHHHHCCC
Q ss_conf 9735776760332131
Q gi|254780465|r 162 ILFPEGRISVVQQKQM 177 (469)
Q Consensus 162 vlyP~g~vS~~Q~~qm 177 (469)
|+=|+=+.|+-|-..+
T Consensus 158 iiKPk~GLsp~~~a~~ 173 (430)
T 2d69_A 158 VPKPKMGWSVEEYAEI 173 (430)
T ss_dssp CCSSSSCCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHH
T ss_conf 4578768897999999
No 141
>2w3l_A BCL2-XL, apoptosis regulator BCL-2; HET: DRO; 2.10A {Homo sapiens} PDB: 2o2f_A*
Probab=58.24 E-value=8.1 Score=17.59 Aligned_cols=30 Identities=33% Similarity=0.668 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf 588899999975015431358311345565444011055899999
Q gi|254780465|r 194 FDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSS 238 (469)
Q Consensus 194 FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~ 238 (469)
..-.+.++.++|.| .||||||++ .|+|-+.
T Consensus 65 ~~~f~~Va~elF~d-------------ginWGRIva--l~~F~g~ 94 (144)
T 2w3l_A 65 RGRFATVVEELFRD-------------GVNWGRIVA--FFEFGGV 94 (144)
T ss_dssp HHHHHHHHHHHTTT-------------CCCHHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHCC-------------CCCHHHHHH--HHHHHHH
T ss_conf 99999999998568-------------997999999--9999999
No 142
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A*
Probab=57.49 E-value=9.1 Score=17.25 Aligned_cols=76 Identities=9% Similarity=0.112 Sum_probs=46.5
Q ss_pred CCCCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 7982079971665-40467999861667855999735776760332131134478708997179658889999997501
Q gi|254780465|r 130 RDHYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D 207 (469)
++|.+.|.+|+|| --|.|.+..|. ..+.+|++.+-..+.-+.-+ +.....+.......-..+.++++..++++...
T Consensus 8 ~gK~~lITGass~~GIG~aia~~la-~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMH-REGAELAFTYQNDKLKGRVE-EFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESSTTTHHHHH-HHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHH-HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 8997999899985018999999999-86999999958879999999-99862697279983132247899999999874
No 143
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=57.48 E-value=9.1 Score=17.25 Aligned_cols=75 Identities=8% Similarity=0.105 Sum_probs=47.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEE-ECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577-676033213113-447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTT-SEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt-~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+.++.|++..|+.-|.|.+..|.. .+-+|++.+=.. +.-... .++.. ..+.+++.+.+| .+.++++++++++-..
T Consensus 7 ~gKvalVTGgs~GIG~aia~~la~-~Ga~V~i~~r~~~~l~~~~-~~l~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLE-AGAAVAFCARDGERLRAAE-SALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHH-HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHH-HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 999899948786999999999998-7998999979889999999-99986468973999978889999999999999997
No 144
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycolysis, mutant, permutation, permuted sequence, protein folding; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=57.42 E-value=9.1 Score=17.25 Aligned_cols=151 Identities=16% Similarity=0.168 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCC-HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECC
Q ss_conf 238889999999973179820799716654-0467999861667855999735776760332131134478708997179
Q gi|254780465|r 114 IAMQFIAELMDHILEERDHYITIVGATSGD-TGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQS 192 (469)
Q Consensus 114 ~a~q~l~~~~~~~l~~~~~~~~il~ATSGD-TGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G 192 (469)
+.|...+..|+..|.+ ++.. +. | .|..|.++....++=++++| ..=|-- .+-...... + .....+
T Consensus 4 ~SL~pva~~Ls~lL~~---~V~f-i~---d~~g~~a~~~i~~l~~GeIlLL-ENvRF~--~eE~~~~~~--e--~~~~~~ 69 (416)
T 1fw8_A 4 YSLAPVAKELQSLLGK---DVTF-LN---DCVGPEVEAAVKASAPGSVILL-ENLRYH--IEEEGSRKV--D--GQKVKA 69 (416)
T ss_dssp TCSHHHHHHHHHHHTS---CEEE-CS---CSSSHHHHHHHHTSCTTEEEEC-CCGGGS--HHHHSEEEE--T--TEEEEC
T ss_pred CCHHHHHHHHHHHHCC---CCEE-CC---CCCCHHHHHHHHCCCCCCEEEE-EECCCC--CCCCCCCCC--C--HHHHCC
T ss_conf 1669999999999789---9787-88---8888899999962899958998-656878--131046543--1--122012
Q ss_pred CHHHHHHHHHHHHC------CHHHHCCCC-CCCCCCC-----CHHHCCCCHHHHHHHHHHHCC-C---------------
Q ss_conf 65888999999750------154313583-1134556-----544401105589999987447-7---------------
Q gi|254780465|r 193 SFDDCQKIVKNLFS------DVFFCHSVN-LSGINSI-----NWARIMAQIVYYFVSSIALGS-P--------------- 244 (469)
Q Consensus 193 ~FDDcq~~Vk~~f~------D~~~~~~~~-l~s~NSI-----N~~Ril~Q~vyYf~a~~~~~~-~--------------- 244 (469)
.-+.+..+++++-. ..+|...++ -.|.-.+ =-|++|-.-+-++...+.-.. +
T Consensus 70 ~~~n~~~fak~LA~laDiyVNDAFg~aHR~haS~vG~~~~~s~aG~LmekEl~~L~k~l~~p~rP~vaIlGGaKvsdKI~ 149 (416)
T 1fw8_A 70 SKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQ 149 (416)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHHSCCSSEEEEEECSCSTTTHH
T ss_pred CHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
T ss_conf 21117999999875488998656210131332010224673445176999999999997188998189930441315799
Q ss_pred -----CCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf -----8873899634657887886677750898770587236
Q gi|254780465|r 245 -----NRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATN 281 (469)
Q Consensus 245 -----~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN 281 (469)
.+.++..+-.|..+|.+- ....|..|++-.+-.+
T Consensus 150 vi~~Ll~kvD~IiigG~mantFL---k~a~g~~IG~sl~e~~ 188 (416)
T 1fw8_A 150 LIDNLLDKVDSIIIGGGMAFTFK---KVLENTEIGDSIFDKA 188 (416)
T ss_dssp HHHHHHTTCSEEEEEGGGHHHHH---HHHSCCCCCSCCCCHH
T ss_pred HHHHHHHHHCEEEECCHHHHHHH---HHHHCCCCCCHHHHHH
T ss_conf 99999976213552618899998---7501260773056556
No 145
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=57.31 E-value=9.1 Score=17.23 Aligned_cols=71 Identities=13% Similarity=0.143 Sum_probs=46.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC-CHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 82079971665404679998616678559997357767-6033213113447870899717-965888999999750
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI-SVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v-S~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
.|..|++..|+--|.|.+..|. ..+.+|++.+-.... ....+ +. ..+.+++.+.+| .+.++|+++++++..
T Consensus 6 gK~alVTGas~GIG~aia~~la-~~Ga~V~~~~r~~~~~~~~~~-~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFV-EEGAKVMITGRHSDVGEKAAK-SV--GTPDQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HH--CCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HH--CCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9879994878789999999999-879999999798789999999-85--7899579998268999999999999999
No 146
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=57.04 E-value=9.2 Score=17.20 Aligned_cols=69 Identities=13% Similarity=0.206 Sum_probs=40.6
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 98207997166540467999861667855999735776760332131134478708997179658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D 207 (469)
+++.++++..||-.|++.+..+......+|.++--...-...+. ....+|..+ .|+.+|...++. ++.+
T Consensus 4 ~~k~ILVtGatG~iG~~lv~~Ll~~g~~~V~~l~R~~~~~~~~~-----l~~~~v~~v--~~D~~~~~~~~~-a~~~ 72 (299)
T 2wm3_A 4 DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKE-----LRLQGAEVV--QGDQDDQVIMEL-ALNG 72 (299)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHH-----HHHTTCEEE--ECCTTCHHHHHH-HHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH-----HHCCCCEEE--EEECCCCCCCCC-CCCC
T ss_conf 99889998998889999999999589971999986853010134-----401897899--944356300112-3677
No 147
>1ltk_A Phosphoglycerate kinase; PGK, glycolysis, glycerol, open conformation, ADP complex, selenomethionine, transferase; HET: AMP; 3.00A {Plasmodium falciparum} SCOP: c.86.1.1
Probab=57.04 E-value=9.2 Score=17.20 Aligned_cols=169 Identities=14% Similarity=0.181 Sum_probs=77.6
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCE
Q ss_conf 981206-8238889999999973179820799716654046799986166785599973577676033213113447870
Q gi|254780465|r 107 PTLSFK-DIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNI 185 (469)
Q Consensus 107 PT~aFK-D~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv 185 (469)
|.+.+. .+.+...+..|+..|.+ ++..+--.. |..+..+.+..+.=++++| +.=|--+-.+..-.. ..+.
T Consensus 76 P~g~~~~~~SL~pva~~L~~~L~~---~V~fv~d~~---g~~~~~~i~~l~~g~I~LL-ENvRF~~eE~~n~~~--~~~~ 146 (425)
T 1ltk_A 76 PDGLRNEKYTLKPVAETLKGLLGE---EVLFLNDCV---GKEVEDKINAAKENSVILL-ENLRFHIEEEGKGVD--ANGN 146 (425)
T ss_dssp CTTSCCGGGCSHHHHHHHHHHHTS---CCEECSCSS---SHHHHHHHHSSCTTEEEEC-CCGGGSHHHHSEEEC--TTCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCC---CCCCCCCCC---CHHHHHHHHCCCCCCEEEE-CCEEECCHHCCCCCC--CCCC
T ss_conf 999889984569999999998787---761136666---7267777532798878986-011102000025642--0010
Q ss_pred EEEEECCCHHHHHHHHHHHHC------CHHHHCCCC-CCC------CCCCCHHHCCCCHHHHHHHHHHHC-CC-------
Q ss_conf 899717965888999999750------154313583-113------455654440110558999998744-77-------
Q gi|254780465|r 186 NVIAVQSSFDDCQKIVKNLFS------DVFFCHSVN-LSG------INSINWARIMAQIVYYFVSSIALG-SP------- 244 (469)
Q Consensus 186 ~~i~v~G~FDDcq~~Vk~~f~------D~~~~~~~~-l~s------~NSIN~~Ril~Q~vyYf~a~~~~~-~~------- 244 (469)
.+...=+....++|++-. ..+|...++ -+| ..|. -||++-.-+-+..-.+.-. ++
T Consensus 147 ---~~~~~~~~~~~f~k~LA~laDvyVNDAF~~aHR~haS~~gi~~~~~~-aG~L~ekEi~~L~k~l~~~~~P~vaIlGG 222 (425)
T 1ltk_A 147 ---KVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSMVGVKLNVKA-SGFLMKKELEYFSKALENPQRPLLAILGG 222 (425)
T ss_dssp ---EEECCHHHHHHHHHHHHTSCSEEEEECTTSCSSCCHHHHCCCCSEEE-ECHHHHHHHHHHHHHHTSCCSSEEEEEEC
T ss_pred ---HHHCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEECCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf ---11011233799999986416787614554345566532210001354-30469999999999984878884699837
Q ss_pred -------------CCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
Q ss_conf -------------88738996346578878866777508987705872367633567753
Q gi|254780465|r 245 -------------NRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFD 291 (469)
Q Consensus 245 -------------~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~ 291 (469)
.+.++..+-+|..+|.+-. -..|..|++=.+-.+..+...+.+.
T Consensus 223 aKvsdKi~~i~~l~~k~D~iiigG~~antfL~---a~~g~~ig~s~~e~~~~~~a~~i~~ 279 (425)
T 1ltk_A 223 AKVSDKIQLIKNLLDKVDRMIIGGGMAYTFKK---VLNNMKIGTSLFDEAGSKIVGEIME 279 (425)
T ss_dssp SCSGGGHHHHHHHHTTCSEEEEESSHHHHHHH---HHHCCCCTTSCCCTTGGGTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCEEEECCHHHHHHHH---HHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 74120799999888624728964279999999---7038866853324667799999999
No 148
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=56.95 E-value=9.2 Score=17.19 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=17.8
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 73899634657887886677750898770587
Q gi|254780465|r 247 NISFSVPTGNFGDIFAGYMAKMMGLPIEKLII 278 (469)
Q Consensus 247 ~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~ 278 (469)
.++..+-+|..+|.+- +-+|..|++-.+
T Consensus 207 k~D~iiigG~mantFL----~A~G~~IG~sl~ 234 (387)
T 1zmr_A 207 IADQLIVGGGIANTFI----AAQGHDVGKSLY 234 (387)
T ss_dssp TCSEEEEEEHHHHHHH----HHTTCCCTTCSC
T ss_pred HCEEEEECHHHHHHHH----HHCCCCCCCCCC
T ss_conf 1059998709999999----975987787764
No 149
>2vof_A BCL-2-related protein A1; BH3, cytoplasm, apoptosis, Pro-surviVal, mitochondrion, protein-protein complex; 1.8A {Mus musculus} PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Probab=56.83 E-value=6.2 Score=18.41 Aligned_cols=24 Identities=29% Similarity=0.621 Sum_probs=15.2
Q ss_pred HHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHH
Q ss_conf 899999975015431358311345565444011055
Q gi|254780465|r 197 CQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIV 232 (469)
Q Consensus 197 cq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~v 232 (469)
.+++++++|.|. -||||||++=.+
T Consensus 76 f~~Va~elF~DG------------~iNWGRIval~~ 99 (157)
T 2vof_A 76 FNQVMEKEFEDG------------IINWGRIVTIFA 99 (157)
T ss_dssp HHHHHHHHHTTC------------CCCHHHHHHHHH
T ss_pred HHHHHHHHHCCC------------CCCHHHHHHHHH
T ss_conf 999999984789------------987899999999
No 150
>2a5y_A Apoptosis regulator CED-9; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: f.1.4.1
Probab=55.34 E-value=7.3 Score=17.90 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHH
Q ss_conf 9658889999997501543135831134556544401105589999
Q gi|254780465|r 192 SSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVS 237 (469)
Q Consensus 192 G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a 237 (469)
..+.-.+.+++++|.|+-|+ ..||||||++ .|+|-+
T Consensus 97 ~a~~~f~~Va~~~~~~e~f~--------~ginWGRIVa--L~aF~g 132 (204)
T 2a5y_A 97 ISFSLYQDVVRTVGNAQTDQ--------SPMSYGRLIG--LISFGG 132 (204)
T ss_dssp CCHHHHHHHHTTTTCCC--C--------CTTCHHHHHH--HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHC--------CCCCHHHHHH--HHHHHH
T ss_conf 37999999999985355514--------7887999999--999999
No 151
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=55.16 E-value=9.9 Score=17.00 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=18.4
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 73899634657887886677750898770587236
Q gi|254780465|r 247 NISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATN 281 (469)
Q Consensus 247 ~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN 281 (469)
.++..+-.|..+|.+-.. .|..|++-.+-..
T Consensus 229 k~D~iiigG~mantfL~a----~G~~iG~sl~e~~ 259 (415)
T 16pk_A 229 RIDYLLIGGAMAYTFLKA----QGYSIGKSKCEES 259 (415)
T ss_dssp GCSEEEECTTHHHHHHHH----HTCCCTTCCCCGG
T ss_pred HCCEEEECCHHHHHHHHH----CCCCCCCCCCCHH
T ss_conf 458245451899999998----1985565423156
No 152
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase, propargylglycine; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=54.85 E-value=10 Score=16.97 Aligned_cols=13 Identities=31% Similarity=0.273 Sum_probs=7.4
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 7089999998752
Q gi|254780465|r 326 RNSLLVKEAFYSL 338 (469)
Q Consensus 326 ~d~~~v~~~m~~l 338 (469)
.|+.++.++.++-
T Consensus 269 ~nA~~lA~~L~~h 281 (404)
T 1e5e_A 269 ENAMKVAEYLKSH 281 (404)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCC
T ss_conf 8999999998608
No 153
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=54.75 E-value=10 Score=16.95 Aligned_cols=25 Identities=20% Similarity=0.361 Sum_probs=20.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCC
Q ss_conf 8996346578878866777508987
Q gi|254780465|r 249 SFSVPTGNFGDIFAGYMAKMMGLPI 273 (469)
Q Consensus 249 ~f~VPtGNfGni~Ag~~Ak~MGLPI 273 (469)
++.+-+|.+-...+++.|+..+.|+
T Consensus 98 ~~i~~~~~~~~~~~~~~a~~~~ip~ 122 (364)
T 1f0k_A 98 DVVLGMGGYVSGPGGLAAWSLGIPV 122 (364)
T ss_dssp SEEEECSSTTHHHHHHHHHHTTCCE
T ss_pred CEEEEECCCCCCHHHHHHHHCCCCE
T ss_conf 7799846755686999975358878
No 154
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=54.43 E-value=10 Score=16.92 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=14.5
Q ss_pred EEEEEECCCHHHHHHHHHHH--HCCCCC
Q ss_conf 38996346578878866777--508987
Q gi|254780465|r 248 ISFSVPTGNFGDIFAGYMAK--MMGLPI 273 (469)
Q Consensus 248 i~f~VPtGNfGni~Ag~~Ak--~MGLPI 273 (469)
+-+.+-+.-|+-+.+ +++ .++|||
T Consensus 236 ~mi~~~~~G~~a~~~--l~~~~~~~lpi 261 (413)
T 2oem_A 236 LLFNVFAYGLDVLQA--LREDEEIAVPI 261 (413)
T ss_dssp EEECGGGSCHHHHHH--HHHCTTTCCCE
T ss_pred EEEECCCCCHHHHHH--HHHCCCCCCEE
T ss_conf 998256564899999--98635458703
No 155
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei 1710B}
Probab=54.25 E-value=10 Score=16.90 Aligned_cols=156 Identities=17% Similarity=0.113 Sum_probs=70.4
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHC-------CCCC--CEEE-EECCCCCC
Q ss_conf 466213898120682388899999999731798207997166540467999861-------6678--5599-97357767
Q gi|254780465|r 100 LLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFA-------GKKR--INMY-ILFPEGRI 169 (469)
Q Consensus 100 vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~-------~~~~--i~v~-vlyP~g~v 169 (469)
+-||..-|+..=+..--+.+.-+-+|+ ++.+.+. ++++=||---||++.+.. +..+ +..+ +-.|.+.-
T Consensus 15 ~~~~~~~p~~~~~~~i~~~v~~l~dy~-~ksg~k~-vVvGlSGGVDSaV~A~L~~~a~g~~~~~g~~~~~v~~~~~~~~~ 92 (285)
T 3dpi_A 15 AAELHVSPTFDARDEAERRIGFVADYL-RTAGLRA-CVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAQ 92 (285)
T ss_dssp HHHTTCCSSCCHHHHHHHHHHHHHHHH-HHHTCCE-EEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSCC-
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHH-HHHCCCC-EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
T ss_conf 998088999999999999999999999-9819996-99978888999999999999988734677663799984787886
Q ss_pred CHHH-HCC-CEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 6033-213-11344787089971796588899999975015431358311345565444011055899999874477887
Q gi|254780465|r 170 SVVQ-QKQ-MTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRN 247 (469)
Q Consensus 170 S~~Q-~~q-mtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~ 247 (469)
.+.. .++ +....+...+.+.++--||.....++..+....-.....++..|- -+|+-..+.|+ +| +.. +
T Consensus 93 ~~~~da~~~~a~~lgi~~~~i~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Ni--~aR~R~~~ly~-~A--~~~--~-- 163 (285)
T 3dpi_A 93 HDEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNI--KARERMIAQYA-VA--GAR--N-- 163 (285)
T ss_dssp --CHHHHHHHHHHCCSEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHH--HHHHHHHHHHH-HH--HHT--T--
T ss_pred CCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCH--HHHHHHHHHHH-HH--HHC--C--
T ss_conf 559999999998538753055120588888999875156578841225786157--99888788999-98--754--9--
Q ss_pred EEEEEECCCHHHHHHHHHHH
Q ss_conf 38996346578878866777
Q gi|254780465|r 248 ISFSVPTGNFGDIFAGYMAK 267 (469)
Q Consensus 248 i~f~VPtGNfGni~Ag~~Ak 267 (469)
..++=|||.-..+-||..|
T Consensus 164 -~lVlgTgNksE~~~Gy~tk 182 (285)
T 3dpi_A 164 -GVVIGTDHAAESVMGFFTK 182 (285)
T ss_dssp -EEEBCCCCHHHHHHHHHHC
T ss_pred -CEEEECCCCCCEEEEEEEE
T ss_conf -8898379876103653465
No 156
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=54.21 E-value=10 Score=16.90 Aligned_cols=48 Identities=15% Similarity=0.255 Sum_probs=28.0
Q ss_pred CCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHC
Q ss_conf 6785599973577676033213113447870899717965888999999750
Q gi|254780465|r 155 KKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFS 206 (469)
Q Consensus 155 ~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~ 206 (469)
..++.++.+-- |...+-+-++|++. ++ +++-++++||+.+.+++++..
T Consensus 132 ~~gv~v~~Vgi-g~~~~~~L~~ia~~-~~--~~~~~~~~~~~L~~~~~~i~~ 179 (182)
T 1shu_X 132 SLGASVYCVGV-LDFEQAQLERIADS-KE--QVFPVKGGFQALKGIINSILA 179 (182)
T ss_dssp HTTCEEEEEEC-SSCCHHHHHHHSSS-GG--GEEESSSTTHHHHHHHHHHHH
T ss_pred HCCCEEEEEEE-CCCCHHHHHHHHCC-CC--CEEEECCCHHHHHHHHHHHHH
T ss_conf 78999999984-75489999998589-99--669934999999999999986
No 157
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum tls} SCOP: c.2.1.2
Probab=54.13 E-value=10 Score=16.89 Aligned_cols=72 Identities=14% Similarity=0.225 Sum_probs=42.8
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCE------EEEECCCCCCCHHHHC-CCEEECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 207997166540467999861667855------9997357767603321-3113447870899717-9658889999997
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRIN------MYILFPEGRISVVQQK-QMTTSEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~------v~vlyP~g~vS~~Q~~-qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
++.+++..|+--|.|.+..|.. .+-+ .+++.-.. -..+|+. +-....+.+++.+.+| .+.++++++++++
T Consensus 3 KV~lITGas~GIG~aiA~~la~-~Ga~v~~~~~~v~~~~r~-~~~l~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~ 80 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFAR-AARHHPDFEPVLVLSSRT-AADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-HTTTCTTCCEEEEEEESC-HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHH-HCCCCCCCCCEEEEEECC-HHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 8899935886899999999998-375002677579999399-99999999999855994799992079999999999999
Q ss_pred HC
Q ss_conf 50
Q gi|254780465|r 205 FS 206 (469)
Q Consensus 205 f~ 206 (469)
..
T Consensus 81 ~~ 82 (244)
T 2bd0_A 81 VE 82 (244)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 158
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=53.92 E-value=10 Score=16.87 Aligned_cols=218 Identities=12% Similarity=0.130 Sum_probs=102.5
Q ss_pred HHHHHHHHHHCCCCC-----CHHHHHHHHHHHHHH-CCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 999999987515789-----989999999998630-47667860477248825466213898120682388899999999
Q gi|254780465|r 53 EIALFIFRLFIGQEI-----KSSKLRDIVNRSYHC-FRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHI 126 (469)
Q Consensus 53 e~a~~il~~f~~~~i-----~~~~l~~ii~~ay~~-f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~ 126 (469)
++...|-...++.++ +.+.+..++.+.... .......|.. .+.+| =||-||+++=|--..--+| ++
T Consensus 50 ~ii~~ik~~~~~~~~~~~~~~~~~i~~~v~eeL~~~l~~~~~~~~~---~~p~V-Il~vG~~G~GKTTT~aKLA----~~ 121 (425)
T 2ffh_A 50 DFVERVREEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVL---KDRNL-WFLVGLQGSGKTTTAAKLA----LY 121 (425)
T ss_dssp HHHHHHHHHHHTTTGGGCSCHHHHHHHHHHHHHHHHTTSSCCCCCC---CSSEE-EEEECCTTSSHHHHHHHHH----HH
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCEE-EEEECCCCCCCHHHHHHHH----HH
T ss_conf 9999999997066456647989999999999998500554345456---89738-9996678876100899999----99
Q ss_pred HHCCCCCEEEEECCCCCH-HHHHHHHH---CCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC--CC-------
Q ss_conf 731798207997166540-46799986---166785599973577676033213113447870899717--96-------
Q gi|254780465|r 127 LEERDHYITIVGATSGDT-GAAAIKAF---AGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ--SS------- 193 (469)
Q Consensus 127 l~~~~~~~~il~ATSGDT-GsAa~~a~---~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~--G~------- 193 (469)
++++++++. |+| .|| =.||++=. ...-++.++.-++......+-+.-.......+.-+|=|| |-
T Consensus 122 ~~~~g~kv~-lva--~Dt~R~aA~eQL~~~a~~~~vp~~~~~~~~dp~~i~~~~~~~ak~~~~DviiIDTAGR~~~d~~l 198 (425)
T 2ffh_A 122 YKGKGRRPL-LVA--ADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPL 198 (425)
T ss_dssp HHTTTCCEE-EEE--CCSSCHHHHHHHHHHHHHHTCCEEECCTTCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHH
T ss_pred HHHCCCEEE-EEE--CCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
T ss_conf 986398368-984--35567567999999998708821224677776778999999998669988999666512536999
Q ss_pred HHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHCCC
Q ss_conf 58889999997501543135831134556544401105589999987447788738996--3465788788667775089
Q gi|254780465|r 194 FDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSV--PTGNFGDIFAGYMAKMMGL 271 (469)
Q Consensus 194 FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~V--PtGNfGni~Ag~~Ak~MGL 271 (469)
++..+.+.+.+--| +.+-+.++ ..+.=.-..+.-|+..+.+. .+.+.= =|.-.|.+++ ++...|+
T Consensus 199 m~EL~~i~~~~~p~----e~~LVlda---~~gq~~~~~a~~F~~~~~i~----gvIlTKlD~takgG~als--i~~~t~~ 265 (425)
T 2ffh_A 199 MGELARLKEVLGPD----EVLLVLDA---MTGQEALSVARAFDEKVGVT----GLVLTKLDGDARGGAALS--ARHVTGK 265 (425)
T ss_dssp HHHHHHHHHHHCCS----EEEEEEEG---GGTTHHHHHHHHHHHHTCCC----EEEEESGGGCSSCHHHHH--HHHHHCC
T ss_pred HHHHHHHHHHHCCC----EEEEEEEC---CCCHHHHHHHHHHHHHCCCC----CEEEECCCCCCCCHHHHH--HHHHHCC
T ss_conf 99999999861985----69997305---55867899999988646998----547632467775139999--9998698
Q ss_pred CCCEEEEECCC---------CCHHHHHHHCCCH
Q ss_conf 87705872367---------6335677532220
Q gi|254780465|r 272 PIEKLIIATNE---------NDTLVRMFDMGMY 295 (469)
Q Consensus 272 PI~kli~AtN~---------NdiL~rf~~tG~y 295 (469)
|| +++..-+. .....|.+--|+.
T Consensus 266 PI-~fig~GE~~~Dle~F~p~~~~~rilGmGDi 297 (425)
T 2ffh_A 266 PI-YFAGVSEKPEGLEPFYPERLAGRILGMGDV 297 (425)
T ss_dssp CE-EEEECSSSGGGEEECCHHHHHHHHHTSSCC
T ss_pred CE-EEEECCCCHHHCCCCCHHHHHHHHCCCCCH
T ss_conf 87-999469972623414899999997187407
No 159
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=53.21 E-value=11 Score=16.79 Aligned_cols=75 Identities=7% Similarity=0.092 Sum_probs=45.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEE-ECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113-447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTT-SEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt-~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
.+|.. |++..|+--|.|.+..|. ..+.+|++..-.. +..+..+ ++.. ..+.+++.+.+| .+.++|+++++++..
T Consensus 7 ~GKva-lITGas~GIG~a~a~~la-~~Ga~Vv~~~r~~~~l~~~~~-~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 7 AGRTA-FVTGGANGVGIGLVRQLL-NQGCKVAIADIRQDSIDKALA-TLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp TTCEE-EEETTTSTHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEE-EEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 99889-992888789999999999-879989999898899999999-998407898089997668999999999999999
Q ss_pred C
Q ss_conf 1
Q gi|254780465|r 207 D 207 (469)
Q Consensus 207 D 207 (469)
.
T Consensus 84 ~ 84 (319)
T 3ioy_A 84 R 84 (319)
T ss_dssp H
T ss_pred H
T ss_conf 7
No 160
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=53.19 E-value=11 Score=16.79 Aligned_cols=74 Identities=9% Similarity=0.120 Sum_probs=43.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCC--CCCCEEEEECCCC-CCCHHHHCCCEE-ECCCCEEEEEEC-CCHHHHHHHHHHHH
Q ss_conf 982079971665404679998616--6785599973577-676033213113-447870899717-96588899999975
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAG--KKRINMYILFPEG-RISVVQQKQMTT-SEASNINVIAVQ-SSFDDCQKIVKNLF 205 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~--~~~i~v~vlyP~g-~vS~~Q~~qmtt-~~~~Nv~~i~v~-G~FDDcq~~Vk~~f 205 (469)
+.++.|++..|+--|.|.+..|+. .++-+|++..-.. +.-++.+ ++.. ..+.+++.+.+| .+.+++++++.++.
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~Ga~Vv~~~r~~~~l~~~~~-~l~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~ 83 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKE-ELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHH-HHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH-HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 99889990778789999999998613489989999899999999999-98731799649999777999999999999877
No 161
>1ohu_A Apoptosis regulator CED-9; BCL-2 family; 2.03A {Caenorhabditis elegans} SCOP: f.1.4.1 PDB: 1ty4_A
Probab=53.08 E-value=8.9 Score=17.32 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 65888999999750154313583113455654440110558999998
Q gi|254780465|r 193 SFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 193 ~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
.....+.++.++|+|.-|. ..||||||++ .|.|-+.+
T Consensus 78 a~~~f~~Va~~~~~d~lf~--------~ginWGRIVa--l~aF~g~l 114 (175)
T 1ohu_A 78 SFSLYQDVVRTVGNAQTDQ--------SPMSYGRLIG--LISFGGFV 114 (175)
T ss_dssp CHHHHHHHHTTSCC--------------CCCHHHHHH--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCC--------CCCCHHHHHH--HHHHHHHH
T ss_conf 1889999999998755304--------7887999999--99999999
No 162
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma- family, lyase; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=52.85 E-value=11 Score=16.75 Aligned_cols=96 Identities=8% Similarity=0.147 Sum_probs=47.2
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEEC
Q ss_conf 62138981206823888999999997317982079971665404679998616678559997357767603321311344
Q gi|254780465|r 102 ELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSE 181 (469)
Q Consensus 102 ELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~ 181 (469)
=.|+.-|..|+|..- +.+.+-.++.. -+.+-.+--|-.+..+.++..++-.--++||.|. +-+.-..| +..
T Consensus 80 PIy~sstf~f~~~~~-----~~~~~~~~~~~--~~YsR~gNPT~~~lE~~la~LEg~~~a~~fsSGM-AAi~~~l~-al~ 150 (445)
T 1qgn_A 80 PVVNTSAYFFNKTSE-----LIDFKEKRRAS--FEYGRYGNPTTVVLEEKISALEGAESTLLMASGM-CASTVMLL-ALV 150 (445)
T ss_dssp CBCCCSBBCBSSHHH-----HHHHHTTSSCC--CCBGGGCCHHHHHHHHHHHHHHTCSEEEEESCHH-HHHHHHHH-HHS
T ss_pred CCCCCCCEEECCHHH-----HHHHHCCCCCC--CEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHH-HHHHHHHH-HCC
T ss_conf 801676267189899-----99874387689--3455998878999999999984997389944899-99999999-637
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHC
Q ss_conf 7870899717965888999999750
Q gi|254780465|r 182 ASNINVIAVQSSFDDCQKIVKNLFS 206 (469)
Q Consensus 182 ~~Nv~~i~v~G~FDDcq~~Vk~~f~ 206 (469)
..+=|++..+.-+-....+.++.+.
T Consensus 151 ~~Gd~iv~~~~~Yg~T~~l~~~~l~ 175 (445)
T 1qgn_A 151 PAGGHIVTTTDCYRKTRIFIETILP 175 (445)
T ss_dssp CSSCEEEEETTSCHHHHHHHHHTGG
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 8999899857887761340232112
No 163
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii OT3}
Probab=52.47 E-value=11 Score=16.71 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 6823888999999997317982079971665404679998616678559997
Q gi|254780465|r 112 KDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYIL 163 (469)
Q Consensus 112 KD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vl 163 (469)
+...++..++.++..|. +.+..+.-..|+ .+.++....+.=++++|
T Consensus 65 ~~~sl~~~a~~L~~~L~---~~V~f~~d~~g~---~~~~~i~~l~~g~i~LL 110 (410)
T 2cun_A 65 DYTTTEEHARVLSELLD---QHVEYIEDIFGR---YAREKIKELKSGEVAIL 110 (410)
T ss_dssp TCCCSHHHHHHHHHHHT---SCEEECSCSSSH---HHHHHHHTCCTTCEEEC
T ss_pred CCCCHHHHHHHHHHHHC---CCEEECCCCCCH---HHHHHHHCCCCCCEEEE
T ss_conf 76755789999999968---952532344467---88999871787878986
No 164
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=52.09 E-value=11 Score=16.67 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=45.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+| ..+++..|+--|.|.+..|. ..+-+|++..= ++-..+++. ....+++.+.+| .+.++|+++++++...
T Consensus 9 GK-valITGas~GIG~aiA~~la-~~Ga~V~i~~r----~~~~l~~~~-~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 9 GK-VVVVTGGGRGIGAGIVRAFV-NSGARVVICDK----DESGGRALE-QELPGAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp TC-EEEEETCSSHHHHHHHHHHH-HTTCEEEEEES----CHHHHHHHH-HHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CC-EEEEECCCCHHHHHHHHHHH-HCCCEEEEEEC----CHHHHHHHH-HHCCCCEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 98-89994888889999999999-87999999979----989999999-86699779982079999999999999997
No 165
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 1llc_A*
Probab=51.74 E-value=7.9 Score=17.67 Aligned_cols=135 Identities=15% Similarity=0.145 Sum_probs=67.9
Q ss_pred HHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC--C----CCHHHHCCCEEECCCCEEEEEECCCHHHHH
Q ss_conf 9973179820799716654046799986166785599973577--6----760332131134478708997179658889
Q gi|254780465|r 125 HILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG--R----ISVVQQKQMTTSEASNINVIAVQSSFDDCQ 198 (469)
Q Consensus 125 ~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g--~----vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq 198 (469)
-+..++..++.|++| |..|++.+...+..+-++=++||-.. + .-+++. ..+....+ .+ ..++.++|
T Consensus 3 ~~~~~~~~KV~IiGa--G~VG~~la~~l~~~~l~~el~L~Di~~~~~~G~a~DL~h--~~~~~~~~--~~-~~~d~~~~- 74 (326)
T 2zqz_A 3 SITDKDHQKVILVGD--GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSN--ALPFTSPK--KI-YSAEYSDA- 74 (326)
T ss_dssp ---CCCCCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHT--TGGGSCCC--EE-EECCGGGG-
T ss_pred CCCCCCCCEEEEECC--CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC--CCCCCCCC--EE-ECCCHHHH-
T ss_conf 566788987999897--989999999998579988899990688856238898762--53136985--67-26986884-
Q ss_pred HHHHHHHCCHHHHCCCCCCCCCCCCHH--H--CC---CCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
Q ss_conf 999997501543135831134556544--4--01---1055899999874477887389963465788788667775089
Q gi|254780465|r 199 KIVKNLFSDVFFCHSVNLSGINSINWA--R--IM---AQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGL 271 (469)
Q Consensus 199 ~~Vk~~f~D~~~~~~~~l~s~NSIN~~--R--il---~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGL 271 (469)
.|.+. +-+++-.....+ | ++ +.++.-+- .++.+.... .+++-.+|==|+.+..+.+..|+
T Consensus 75 -------~daDv---vvi~ag~prkpg~~R~dll~~Na~I~~~~~--~~i~~~~p~-~~vivvsNPvd~~~~~~~~~sg~ 141 (326)
T 2zqz_A 75 -------KDADL---VVITAGAPQKPGETRLDLVNKNLKILKSIV--DPIVDSGFN-GIFLVAANPVDILTYATWKLSGF 141 (326)
T ss_dssp -------GGCSE---EEECCCCC-----CHHHHHHHHHHHHHHHH--HHHHHHTCC-SEEEECSSSHHHHHHHHHHHHCC
T ss_pred -------CCCEE---EEECCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHCCCCC-EEEEEECCCCHHHHHHHHHHHCC
T ss_conf -------69649---998789889989897898642469999987--553025897-29999168614899999997099
Q ss_pred CCCEEEEEC
Q ss_conf 877058723
Q gi|254780465|r 272 PIEKLIIAT 280 (469)
Q Consensus 272 PI~kli~At 280 (469)
|=+|++..-
T Consensus 142 ~~~rvig~g 150 (326)
T 2zqz_A 142 PKNRVVGSG 150 (326)
T ss_dssp CGGGEEECT
T ss_pred CHHHEEECC
T ss_conf 826577057
No 166
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=51.43 E-value=11 Score=16.60 Aligned_cols=77 Identities=6% Similarity=0.235 Sum_probs=45.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEEEC---------------
Q ss_conf 1798207997166540467999861667855999735776--76033213113447870899717---------------
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIAVQ--------------- 191 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~v~--------------- 191 (469)
+...++.|++..|+--|.|.+..|. ..+.+|++.+-... ...+.+ ++....+..+..+..|
T Consensus 43 ~~~~~VAlITGas~GIG~aiA~~La-~~Ga~Vvi~~~~~~~~~~~~~~-~l~~~~~~~~~~v~~Dl~~~~~~~~~~~~~~ 120 (328)
T 2qhx_A 43 APTVPVALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEANALSA-TLNARRPNSAITVQADLSNVATAPVSGADGS 120 (328)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHH-HHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHH-HHHHHCCCCEEEEEECCCCHHHCCCCCCCCC
T ss_conf 9999889995768789999999999-8799899982898889999999-9975248844899722211111122223322
Q ss_pred ---CCHHHHHHHHHHHHCC
Q ss_conf ---9658889999997501
Q gi|254780465|r 192 ---SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 192 ---G~FDDcq~~Vk~~f~D 207 (469)
.++++|+++|+++...
T Consensus 121 ~Dvt~~~~v~~lv~~~~~~ 139 (328)
T 2qhx_A 121 APVTLFTRCAELVAACYTH 139 (328)
T ss_dssp CCBCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
T ss_conf 5668799999999999998
No 167
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=50.51 E-value=10 Score=16.85 Aligned_cols=72 Identities=11% Similarity=0.068 Sum_probs=45.4
Q ss_pred HHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHH
Q ss_conf 73179820799716654046799986166785599973577676033213113447870899717-96588899999975
Q gi|254780465|r 127 LEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLF 205 (469)
Q Consensus 127 l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f 205 (469)
+..+++.+.|.+|+ +--|.|.+..|. ..+.+|++.|-..+ ...+ + ....++..+.+| .+.++|+++++++-
T Consensus 23 ~~l~gk~ilITGgs-~GIG~aia~~la-~~G~~Vii~~r~~~--~~~~-~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 94 (260)
T 3gem_A 23 MTLSSAPILITGAS-QRVGLHCALRLL-EHGHRVIISYRTEH--ASVT-E---LRQAGAVALYGDFSCETGIMAFIDLLK 94 (260)
T ss_dssp ----CCCEEESSTT-SHHHHHHHHHHH-HTTCCEEEEESSCC--HHHH-H---HHHHTCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCC-CHHHHHHHHHHH-HCCCEEEEEECCHH--HHHH-H---HHHCCCEEEEEECCCHHHHHHHHHHHH
T ss_conf 68698989997896-799999999999-88998999979828--9999-9---985798799930799999999999999
Q ss_pred C
Q ss_conf 0
Q gi|254780465|r 206 S 206 (469)
Q Consensus 206 ~ 206 (469)
.
T Consensus 95 ~ 95 (260)
T 3gem_A 95 T 95 (260)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 168
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomics; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=49.73 E-value=12 Score=16.43 Aligned_cols=17 Identities=0% Similarity=0.176 Sum_probs=7.1
Q ss_pred CEEECCCCHHHHHHHHH
Q ss_conf 10106899999999999
Q gi|254780465|r 443 NCKVMNKNIDEIKKFIK 459 (469)
Q Consensus 443 ~~~~l~nd~~~ik~fI~ 459 (469)
....+.-.+|.+.+.|.
T Consensus 398 ~liRlSVGlEd~~DLi~ 414 (421)
T 2ctz_A 398 EMVRLSVGLEHVEDLKA 414 (421)
T ss_dssp TEEEEECCSSCHHHHHH
T ss_pred CEEEEEECCCCHHHHHH
T ss_conf 97999963499999999
No 169
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=49.60 E-value=12 Score=16.41 Aligned_cols=66 Identities=12% Similarity=0.177 Sum_probs=40.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCH
Q ss_conf 982079971665404679998616678559997357767603321311344787089971796588899999975015
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDV 208 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~ 208 (469)
.+++.|+ .-||-+|++.+..+... +.++.++--+- +..++ ....++..+ .|++.|...+. +++.+.
T Consensus 3 ~kkIlV~-GatG~iG~~l~~~ll~~-g~~V~~~~R~~--~~~~~-----~~~~~~~~v--~~D~~d~~~l~-~a~~~~ 68 (206)
T 1hdo_A 3 VKKIAIF-GATGQTGLTTLAQAVQA-GYEVTVLVRDS--SRLPS-----EGPRPAHVV--VGDVLQAADVD-KTVAGQ 68 (206)
T ss_dssp CCEEEEE-STTSHHHHHHHHHHHHT-TCEEEEEESCG--GGSCS-----SSCCCSEEE--ESCTTSHHHHH-HHHTTC
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHHC-CCEEEEEECCH--HHCCC-----CCCCCCEEE--EECCCHHHHHH-HHHCCC
T ss_conf 8889999-99868999999999978-69899998483--65654-----335661589--60243367899-997699
No 170
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* 2p9q_A* 2paa_A*
Probab=49.08 E-value=12 Score=16.36 Aligned_cols=158 Identities=14% Similarity=0.176 Sum_probs=72.1
Q ss_pred CCC-CCCC-CHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCC
Q ss_conf 981-2068-23888999999997317982079971665404679998616678559997357767603321311344787
Q gi|254780465|r 107 PTL-SFKD-IAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASN 184 (469)
Q Consensus 107 PT~-aFKD-~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~N 184 (469)
|.. .++| +.|...+..|+..|.++ +..+--. .|..+..+....+.=++++| ..=|--+-.+.. .++
T Consensus 66 P~g~~~~~~~SL~~va~~L~~~L~~~---V~fv~d~---~g~~~~~~i~~l~~geI~LL-ENvRF~~eE~~n-----~~~ 133 (416)
T 2wzb_A 66 PDGVPMPDKYSLEPVAVELKSLLGKD---VLFLKDC---VGPEVEKACANPAAGSVILL-ENLRFHVEEEGK-----GKD 133 (416)
T ss_dssp CTTSCCHHHHCSHHHHHHHHHHHTSC---CEECSCS---SSHHHHHHHHSCCTTEEEEC-CCGGGSHHHHTC-----C--
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCC---EEECCCC---CHHHHHHHHHCCCCCCEEEH-HHHHHCCCHHCC-----CCC
T ss_conf 99986786578899999999976897---0764753---35888887641366718874-433305210024-----644
Q ss_pred EEEEEECCCHHHHHHHHHHHH------CCHHHHCCCC-CCCCCCC-----CHHHCCCCHHHHHHHHHHHC-CC-------
Q ss_conf 089971796588899999975------0154313583-1134556-----54440110558999998744-77-------
Q gi|254780465|r 185 INVIAVQSSFDDCQKIVKNLF------SDVFFCHSVN-LSGINSI-----NWARIMAQIVYYFVSSIALG-SP------- 244 (469)
Q Consensus 185 v~~i~v~G~FDDcq~~Vk~~f------~D~~~~~~~~-l~s~NSI-----N~~Ril~Q~vyYf~a~~~~~-~~------- 244 (469)
-..-...+.-..++.++|++- ...+|...++ -.|.-.+ =-|+++-.-+-+..-.++-. ++
T Consensus 134 ~~~~~~~~e~~~~~~fa~~LA~laDvyVNDAF~~aHR~haS~vgi~~~~~~aG~l~ekEl~~L~~~l~~~~rP~vaIlGG 213 (416)
T 2wzb_A 134 ASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGG 213 (416)
T ss_dssp --------CHHHHHHHHHHHHHTCSEEEECCGGGTTCCCHHHHCCCCSCEEECHHHHHHHHHHHHHHHSCCSSEEEEECS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 10001433367789999998632579962452212555541025046400017899999999999983878884799843
Q ss_pred -------------CCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf -------------88738996346578878866777508987705872
Q gi|254780465|r 245 -------------NRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA 279 (469)
Q Consensus 245 -------------~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A 279 (469)
.+.++..+-+|..+|.+- ....|..|++=.+-
T Consensus 214 aKisdKi~vi~~Ll~k~d~iiigG~~antfl---~a~~G~~iG~s~~e 258 (416)
T 2wzb_A 214 AKVADKIQLINNMLDKVNEMIIGGGMAFTFL---KVLNNMEIGTSLFD 258 (416)
T ss_dssp SCHHHHGGGHHHHTTTCSEEEECGGGHHHHH---HHHHCCCCTTSCCC
T ss_pred CCCCCHHHHHHHHHHHCCCEEECCHHHHHHH---HHHCCCCCCCCCCH
T ss_conf 7622289999999863283896609999999---99649855765410
No 171
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=48.61 E-value=12 Score=16.31 Aligned_cols=55 Identities=16% Similarity=0.277 Sum_probs=34.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECC
Q ss_conf 798207997166540467999861667855999735776760332131134478708997179
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQS 192 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G 192 (469)
..|++.||+| |-.|++++......++++++|--- . ....|+. ....++..+.+|-
T Consensus 22 m~kkIlvlGa--G~vg~~~a~~L~~~~~~~v~va~r-~-~~~a~~~----~~~~~~~~~~~D~ 76 (467)
T 2axq_A 22 MGKNVLLLGS--GFVAQPVIDTLAANDDINVTVACR-T-LANAQAL----AKPSGSKAISLDV 76 (467)
T ss_dssp -CEEEEEECC--STTHHHHHHHHHTSTTEEEEEEES-S-HHHHHHH----HGGGTCEEEECCT
T ss_pred CCCCEEEECC--CHHHHHHHHHHHHCCCCEEEEEEC-C-HHHHHHH----HHCCCCCEEEEEC
T ss_conf 4882899998--789999999997089934999969-9-9999998----6015984699847
No 172
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, thermus themophilus; HET: NAD; 2.16A {Thermus thermophilus HB8} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=48.33 E-value=13 Score=16.28 Aligned_cols=52 Identities=19% Similarity=0.212 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHHCCC-CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 238889999999973179-820799716654046799986166785599973577
Q gi|254780465|r 114 IAMQFIAELMDHILEERD-HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG 167 (469)
Q Consensus 114 ~a~q~l~~~~~~~l~~~~-~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g 167 (469)
+....+-..+..+|...+ +++.|++| |+.|.|.+......++.+++.++=.+
T Consensus 62 y~v~~L~~~i~~iLg~~~~~~v~I~Ga--G~~G~~L~~~~~~~~~~~ivgf~DdD 114 (211)
T 2dt5_A 62 YTVPVLKRELRHILGLNRKWGLCIVGM--GRLGSALADYPGFGESFELRGFFDVD 114 (211)
T ss_dssp EEHHHHHHHHHHHHTTTSCEEEEEECC--SHHHHHHHHCSCCCSSEEEEEEEESC
T ss_pred EEHHHHHHHHHHHHCCCCCCEEEEECC--CHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 898999999999809998851899878--88999999846325795699999698
No 173
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structural genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=48.27 E-value=13 Score=16.27 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=46.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 820799716654046799986166785599973577-676033213113447870899717-9658889999997501
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
.++.|++..|+--|.|.+..|. +.+-+|++..-+. +..+++ +++... +..++.+.+| .+-++++++|+++..+
T Consensus 5 GKv~lITG~s~GIG~aia~~la-~~Ga~V~i~~r~~~~l~~~~-~~i~~~-~~~~~~~~~D~~~~~~~~~l~~~~~~~ 79 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLC-KAGATVYITGRHLDTLRVVA-QEAQSL-GGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHH-HHHHHH-SSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHH-HHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9889995858699999999999-87998999979889999999-999964-993899976789999999999864686
No 174
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=48.02 E-value=10 Score=16.94 Aligned_cols=135 Identities=17% Similarity=0.194 Sum_probs=66.1
Q ss_pred HCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC------CCHHHHCCCEEECCCCEEEEEECCCHHHHHHHH
Q ss_conf 31798207997166540467999861667855999735776------760332131134478708997179658889999
Q gi|254780465|r 128 EERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR------ISVVQQKQMTTSEASNINVIAVQSSFDDCQKIV 201 (469)
Q Consensus 128 ~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~------vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~V 201 (469)
...++++.|++| |..|++.+.....++-++-++||=... .-+++. ..+....++.. -.|+.+||
T Consensus 3 ~~~~~KV~IiGa--G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~h--~~~~~~~~~~~--~~~~~~~~---- 72 (316)
T 1ldn_A 3 NNGGARVVVIGA--GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH--GKVFAPKPVDI--WHGDYDDC---- 72 (316)
T ss_dssp TTTSCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH--HTTSSSSCCEE--EECCGGGT----
T ss_pred CCCCCEEEEECC--CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC--CCCCCCCCEEE--ECCCHHHH----
T ss_conf 899986999897--989999999998179988799991789830658477652--43026997388--35987894----
Q ss_pred HHHHCCHHHHCCCCCCCCCCCCH----HHCCCCHHHHHHHH-HHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 99750154313583113455654----44011055899999-87447788738996346578878866777508987705
Q gi|254780465|r 202 KNLFSDVFFCHSVNLSGINSINW----ARIMAQIVYYFVSS-IALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKL 276 (469)
Q Consensus 202 k~~f~D~~~~~~~~l~s~NSIN~----~Ril~Q~vyYf~a~-~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kl 276 (469)
.|.++ .-+++-..... ..++..-+--+... .++.+.+..- +++=.+|=-|+.+..+.|..|+|=+|.
T Consensus 73 ----~~aDi---vvitag~~~k~g~~R~dll~~Na~I~~~~~~~i~~~~p~~-~vivvsNPvd~~~~~~~k~sg~~~~~v 144 (316)
T 1ldn_A 73 ----RDADL---VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQG-LFLVATNPVDILTYATWKFSGLPHERV 144 (316)
T ss_dssp ----TTCSE---EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCS-EEEECSSSHHHHHHHHHHHHTCCGGGE
T ss_pred ----CCCCE---EEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCE-EEEEECCCCCHHHHHHHHHHCCCCCCE
T ss_conf ----78999---9984798899898868998746047899999986338972-999934886378899999849896116
Q ss_pred EEEC
Q ss_conf 8723
Q gi|254780465|r 277 IIAT 280 (469)
Q Consensus 277 i~At 280 (469)
+..-
T Consensus 145 ig~g 148 (316)
T 1ldn_A 145 IGSG 148 (316)
T ss_dssp EECT
T ss_pred ECCC
T ss_conf 6465
No 175
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=47.90 E-value=13 Score=16.24 Aligned_cols=76 Identities=14% Similarity=0.122 Sum_probs=46.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC-CC----HHHHC-CCEEECCCCEEEEEEC-CCHHHHHHHH
Q ss_conf 1798207997166540467999861667855999735776-76----03321-3113447870899717-9658889999
Q gi|254780465|r 129 ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR-IS----VVQQK-QMTTSEASNINVIAVQ-SSFDDCQKIV 201 (469)
Q Consensus 129 ~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~-vS----~~Q~~-qmtt~~~~Nv~~i~v~-G~FDDcq~~V 201 (469)
-++|...|-+|++| -|.|.+..|. ..+.+|++.+-... .. ++++. +.....+..+..+.+| .+.++++.++
T Consensus 4 L~GKvalVTGas~G-IG~aia~~la-~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 81 (274)
T 3e03_A 4 LSGKTLFITGASRG-IGLAIALRAA-RDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHH-HTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
T ss_conf 89987999586878-9999999999-879989999797776688999999988677641870577626789999999999
Q ss_pred HHHHC
Q ss_conf 99750
Q gi|254780465|r 202 KNLFS 206 (469)
Q Consensus 202 k~~f~ 206 (469)
+++..
T Consensus 82 ~~~~~ 86 (274)
T 3e03_A 82 AATVD 86 (274)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 176
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=47.44 E-value=13 Score=16.19 Aligned_cols=75 Identities=9% Similarity=0.128 Sum_probs=47.8
Q ss_pred CCCCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCH-HHHHHHHHHHHCC
Q ss_conf 7982079971665-4046799986166785599973577676033213113447870899717965-8889999997501
Q gi|254780465|r 130 RDHYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSF-DDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~F-DDcq~~Vk~~f~D 207 (469)
++|...|.+|+++ =.|.|.+..|. ..+-+|++.+=....-+..+ +... ...+++.+..+.+. +++++++.++..+
T Consensus 5 ~gK~alITGaag~~GIG~aiA~~la-~~G~~V~i~~r~~~~~~~~~-~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCF-NQGATLAFTYLNESLEKRVR-PIAQ-ELNSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHH-TTTCEEEEEESSTTTHHHHH-HHHH-HTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHH-HHHH-HCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 9988999899998489999999999-87999999968879999999-9985-3688359984145378999999999998
No 177
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, lipid metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=47.14 E-value=13 Score=16.16 Aligned_cols=74 Identities=9% Similarity=0.087 Sum_probs=48.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEE------ECCCCEEEEEEC-CCHHHHHHHHH
Q ss_conf 9820799716654046799986166785599973577-676033213113------447870899717-96588899999
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTT------SEASNINVIAVQ-SSFDDCQKIVK 202 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt------~~~~Nv~~i~v~-G~FDDcq~~Vk 202 (469)
+.++.|++..|+--|.|.+..|.. .+-+|++.+-.. +..+.++ .+.. ..+.+++.+.+| .+.++++++++
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~-~Ga~V~~~~r~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 83 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAG-EGATVAACDLDRAAAQETVR-LLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH-TC------------CCEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 998899928787899999999998-79999999698899999999-9874221012567747999843799999999999
Q ss_pred HHHC
Q ss_conf 9750
Q gi|254780465|r 203 NLFS 206 (469)
Q Consensus 203 ~~f~ 206 (469)
++..
T Consensus 84 ~~~~ 87 (264)
T 2pd6_A 84 QVQA 87 (264)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 178
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=46.74 E-value=12 Score=16.42 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=38.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717965888999999
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKN 203 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~ 203 (469)
...++.|+|| |-+|+++++.....++.++.+.-.. .+..+.. ........ .++.+|.+.+.+.
T Consensus 4 m~~kI~ViGa--G~vG~~va~~L~~~~~~~v~~~dr~--~~~~~~~-----~~~~~~~~--~~d~~d~~~l~~~ 66 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHD--LAALAVL-----NRMGVATK--QVDAKDEAGLAKA 66 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESC--HHHHHHH-----HTTTCEEE--ECCTTCHHHHHHH
T ss_pred CCCCEEEECC--CHHHHHHHHHHHHCCCCCEEEECCC--HHHHHHC-----CCCCCCCC--CCCCCCHHHHHHH
T ss_conf 6078899867--9999999999987899847861265--6664100-----01222211--1244899999999
No 179
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=45.90 E-value=14 Score=16.03 Aligned_cols=71 Identities=8% Similarity=0.101 Sum_probs=45.6
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 9820799716654046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
..|+.+++..|+--|.|.+..|.. .+-+|++..=.. ..+++ .....+.+++.+.+| .+-++|+.+++++..
T Consensus 4 ~gKV~lITGas~GIG~aia~~la~-~G~~V~~~~r~~--~~l~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVA-AGDTVIGTARRT--EALDD--LVAAYPDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSG--GGGHH--HHHHCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCH--HHHHH--HHHHCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 998999908886999999999998-799999998999--99999--9997689579999737999999999999999
No 180
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=45.71 E-value=12 Score=16.50 Aligned_cols=132 Identities=17% Similarity=0.266 Sum_probs=69.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC--C----CCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577--6----76033213113447870899717965888999999
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG--R----ISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKN 203 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g--~----vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~ 203 (469)
+.+++.|++| |..|++.+......+-++-++||=-. + .-++ .++.+..+.++..- .|++.||
T Consensus 5 k~~KV~IiGa--G~VG~~~a~~l~~~~l~~el~L~Di~~~~a~g~a~DL--~~~~~~~~~~~~i~--~~~~~~~------ 72 (317)
T 3d0o_A 5 KGNKVVLIGN--GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDL--KHATPYSPTTVRVK--AGEYSDC------ 72 (317)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHH--HHHGGGSSSCCEEE--ECCGGGG------
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH--HHHCCCCCCCEEEE--CCCHHHH------
T ss_conf 7980999897--8899999999970799886999917897543488988--61251479976993--6978995------
Q ss_pred HHCCHHHHCCCCCCCCCCCCHH--H--CCCCHHHHHHHH-HHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 7501543135831134556544--4--011055899999-8744778873899634657887886677750898770587
Q gi|254780465|r 204 LFSDVFFCHSVNLSGINSINWA--R--IMAQIVYYFVSS-IALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLII 278 (469)
Q Consensus 204 ~f~D~~~~~~~~l~s~NSIN~~--R--il~Q~vyYf~a~-~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~ 278 (469)
.|.++ .-+++..+...+ | ++..-.=.+... -.+.+.+.. .+++-.+|==|+.+..+.|..|+|=+|.+-
T Consensus 73 --~daDv---vvitaG~~rk~g~~R~dll~~N~~i~~~i~~~i~~~~p~-~ivivvsNPvd~~~~~~~k~sg~~~~rvig 146 (317)
T 3d0o_A 73 --HDADL---VVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFD-GIFLVATNPVDILAYATWKFSGLPKERVIG 146 (317)
T ss_dssp --TTCSE---EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCC-SEEEECSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred --CCCCE---EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEEECCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf --79989---998368889989884677776799999999886424897-289993588417999999970999415898
Q ss_pred E
Q ss_conf 2
Q gi|254780465|r 279 A 279 (469)
Q Consensus 279 A 279 (469)
.
T Consensus 147 ~ 147 (317)
T 3d0o_A 147 S 147 (317)
T ss_dssp C
T ss_pred E
T ss_conf 4
No 181
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesis; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A*
Probab=44.72 E-value=14 Score=15.91 Aligned_cols=32 Identities=34% Similarity=0.383 Sum_probs=21.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 79820799716654046799986166785599973
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILF 164 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vly 164 (469)
++++++|+|| |=+|.+||.-.+. .+.+|.|+=
T Consensus 2 k~kki~IIGa--G~sGL~~A~~L~k-~g~~V~v~E 33 (384)
T 2bi7_A 2 KSKKILIVGA--GFSGAVIGRQLAE-KGHQVHIID 33 (384)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHT-TTCEEEEEE
T ss_pred CCCCEEEECC--CHHHHHHHHHHHH-CCCCEEEEE
T ss_conf 8686999896--1999999999984-899579997
No 182
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=44.70 E-value=8.6 Score=17.42 Aligned_cols=134 Identities=21% Similarity=0.253 Sum_probs=61.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHH--H-CCCEEECCCCEEEEEECCCHHHHHH---HHHHH
Q ss_conf 820799716654046799986166785599973577-676033--2-1311344787089971796588899---99997
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQ--Q-KQMTTSEASNINVIAVQSSFDDCQK---IVKNL 204 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q--~-~qmtt~~~~Nv~~i~v~G~FDDcq~---~Vk~~ 204 (469)
+++.|++| |..|++.+....... +.=++||=.. ....-+ . .|+.+..+.+.... -.|++.||.. +|=..
T Consensus 6 ~KI~IiGa--G~VG~~~a~~l~~~~-l~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~~~~~~~~dadivvita 81 (321)
T 3p7m_A 6 KKITLVGA--GNIGGTLAHLALIKQ-LGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVR-GTNDYKDLENSDVVIVTA 81 (321)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE-EESCGGGGTTCSEEEECC
T ss_pred CEEEEECC--CHHHHHHHHHHHHCC-CCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEE-CCCCHHHHCCCCEEEEEC
T ss_conf 87999998--989999999998289-98799992899800408577667476578984793-588678827898999806
Q ss_pred HC-CHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 50-15431358311345565444011055899999874477887389963465788788667775089877058723
Q gi|254780465|r 205 FS-DVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIAT 280 (469)
Q Consensus 205 f~-D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~At 280 (469)
-. ..+-..+..|-..|+ +|+-++. . ++.+.... .+++=.+|=-|+.+..+.|..|+|=+|++-..
T Consensus 82 g~~~k~g~~R~dll~~N~----~I~~~i~----~--~i~~~~p~-~ivlvvsNPvd~~~~~~~k~sg~p~~rvig~g 147 (321)
T 3p7m_A 82 GVPRKPGMSRDDLLGINI----KVMQTVG----E--GIKHNCPN-AFVICITNPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp SCCCCTTCCHHHHHHHHH----HHHHHHH----H--HHHHHCTT-CEEEECCSSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred CCCCCCCCCHHHHHHHHH----HHHHHHH----H--HHHHHCCC-CEEEEECCCHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf 768999998899999899----9999999----9--99863888-58999369616899999997099822277404
No 183
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1G07440, reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=44.68 E-value=14 Score=15.91 Aligned_cols=73 Identities=11% Similarity=0.141 Sum_probs=43.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|.+| |+--|.|.+..|. ..+.+|++.+-.. +..+..+ ++.. .+.++..+.+| .+.++++.+++++..
T Consensus 13 ~gK~alITGa-s~GIG~aiA~~la-~~Ga~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFA-GFGAVIHTCARNEYELNECLS-KWQK-KGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH-HHHH-TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHH-CCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9998999279-8689999999999-879999999799999999999-9873-298089998568999999999999999
No 184
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, structural genomics, PSI; 2.00A {Aquifex aeolicus VF5}
Probab=44.02 E-value=15 Score=15.84 Aligned_cols=74 Identities=12% Similarity=0.155 Sum_probs=46.0
Q ss_pred CCCCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 7982079971665-4046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|-+|+|+ --|.|.+.+|. ..+-+|++.+-..+.-+..+ +.. ..+.+++.+.+| .+-++++++++++..
T Consensus 20 ~gK~alVTGass~~GIG~aiA~~la-~~Ga~V~i~~~~~~~~~~~~-e~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFH-REGAQLAFTYATPKLEKRVR-EIA-KGFGSDLVVKCDVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHH-HHH-HHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHH-HHH-HHCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 8997999899998679999999999-86999999858868999999-998-5259728996575889999999999999
No 185
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 1p33_A*
Probab=43.02 E-value=15 Score=15.74 Aligned_cols=76 Identities=7% Similarity=0.232 Sum_probs=43.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--CCHHHHCCCEEECCCCEEEEE-----------------E
Q ss_conf 798207997166540467999861667855999735776--760332131134478708997-----------------1
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--ISVVQQKQMTTSEASNINVIA-----------------V 190 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--vS~~Q~~qmtt~~~~Nv~~i~-----------------v 190 (469)
...++.|++..|+--|.|.+.+|. ..+.+|++.+=... ...+. +++....+..+..+. +
T Consensus 7 ~~~~VAlVTG~s~GIG~aia~~la-~~Ga~Vvi~~~~~~~~~~~~~-~~l~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEANALS-ATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHH-HHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHH-HHHHHHCCCCEEEEEECHHHHHCCCCCCCCCCC
T ss_conf 999889997878889999999999-869989998189888999999-999742588448985000111102322233236
Q ss_pred C-CCHHHHHHHHHHHHCC
Q ss_conf 7-9658889999997501
Q gi|254780465|r 191 Q-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 191 ~-G~FDDcq~~Vk~~f~D 207 (469)
| .++|+|+++++++...
T Consensus 85 dv~~~~~v~~~~~~~~~~ 102 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTH 102 (291)
T ss_dssp CBCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
T ss_conf 778899999999999998
No 186
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=42.63 E-value=15 Score=15.70 Aligned_cols=44 Identities=9% Similarity=0.176 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 0899999987520265105520221100012134213889999999999986
Q gi|254780465|r 327 NSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEK 378 (469)
Q Consensus 327 d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~ 378 (469)
|-.+.-++++.+...|. ++...+..+++...|.. .++||++|+.
T Consensus 8 Dv~RaieLle~Lq~sge--vp~~KL~aLq~VLqSdF------~~avREVYeh 51 (53)
T 1zl8_A 8 DVQRILELMEHVQKTGE--VNNAKLASLQQVLQSEF------FGAVREVYET 51 (53)
T ss_dssp HHHHHHHHHHHHGGGSS--STHHHHHHHHHHHSCSH------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHH------HHHHHHHHHH
T ss_conf 79899999999988699--98699999999999999------9999999987
No 187
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=41.05 E-value=16 Score=15.53 Aligned_cols=130 Identities=18% Similarity=0.158 Sum_probs=65.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC--CC----CHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 9820799716654046799986166785599973577--67----60332131134478708997179658889999997
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG--RI----SVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNL 204 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g--~v----S~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~ 204 (469)
..++.|++| |..|++.+......+-+.=++||=-. +. -+++. +....+ ++ ....|+.++|
T Consensus 7 ~~KV~IiGa--G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~--~~~~~~-~~--~~~~~~~~~~------- 72 (318)
T 1y6j_A 7 RSKVAIIGA--GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH--GLPFMG-QM--SLYAGDYSDV------- 72 (318)
T ss_dssp CCCEEEECC--SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT--SCCCTT-CE--EEC--CGGGG-------
T ss_pred CCCEEEECC--CHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHC--CCCCCC-CC--EECCCCHHHH-------
T ss_conf 993899897--989999999998279998699990789707999999866--575689-85--4304887884-------
Q ss_pred HCCHHHHCCCCCCCCCCCCHH--H--CC---CCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 501543135831134556544--4--01---1055899999874477887389963465788788667775089877058
Q gi|254780465|r 205 FSDVFFCHSVNLSGINSINWA--R--IM---AQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLI 277 (469)
Q Consensus 205 f~D~~~~~~~~l~s~NSIN~~--R--il---~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli 277 (469)
.|.++ .-+++.-.-..+ | ++ +.++.-+-. .+......-.+ +=.+|=-|+.+..+.|..|+|=+|.+
T Consensus 73 -~~adv---vvitag~~rk~g~~R~dll~~Na~I~~~~~~--~i~~~~p~~iv-~vvsNPvd~~~~~~~k~sg~~~~~vi 145 (318)
T 1y6j_A 73 -KDCDV---IVVTAGANRKPGETRLDLAKKNVMIAKEVTQ--NIMKYYNHGVI-LVVSNPVDIITYMIQKWSGLPVGKVI 145 (318)
T ss_dssp -TTCSE---EEECCCC------CHHHHHHHHHHHHHHHHH--HHHHHCCSCEE-EECSSSHHHHHHHHHHHHTCCTTTEE
T ss_pred -CCCCE---EEECCCCCCCCCCCHHHHHHHCHHHHHHHHH--HHHHCCCCCEE-EEECCCCHHHHHHHHHHHCCCCCCEE
T ss_conf -78888---9972898899999877887656689999987--76423677289-98079607899999997299975789
Q ss_pred EECC
Q ss_conf 7236
Q gi|254780465|r 278 IATN 281 (469)
Q Consensus 278 ~AtN 281 (469)
..-.
T Consensus 146 g~gt 149 (318)
T 1y6j_A 146 GSGT 149 (318)
T ss_dssp ECTT
T ss_pred EEEE
T ss_conf 8730
No 188
>3i1j_A Oxidoreductase, short chain dehydrogenase/reductase family; dimer, mixed alpha-beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV}
Probab=40.85 E-value=16 Score=15.51 Aligned_cols=74 Identities=18% Similarity=0.274 Sum_probs=43.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEECC---CHHHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577-6760332131134478708997179---6588899999975
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQS---SFDDCQKIVKNLF 205 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~G---~FDDcq~~Vk~~f 205 (469)
++|.. +++..|+--|.|.+..|.. .+.+|++.+=.. +..++.+ ++....+.+..++.++. +.++++.+++++.
T Consensus 13 ~gKva-lITGas~GIG~aiA~~la~-~Ga~V~~~~r~~~~l~~~~~-~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 13 KGRVI-LVTGAARGIGAAAARAYAA-HGASVVLLGRTEASLAEVSD-QIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTCEE-EESSTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCEE-EEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHH-HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 96989-9968475999999999998-79989999898899999999-999627887339986144366999999999999
Q ss_pred C
Q ss_conf 0
Q gi|254780465|r 206 S 206 (469)
Q Consensus 206 ~ 206 (469)
.
T Consensus 90 ~ 90 (247)
T 3i1j_A 90 H 90 (247)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 189
>1f16_A Protein (apoptosis regulator BAX, membrane isoform alpha); helical protein; NMR {Homo sapiens} SCOP: f.1.4.1 PDB: 2k7w_A
Probab=40.29 E-value=16 Score=15.63 Aligned_cols=33 Identities=30% Similarity=0.745 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 65888999999750154313583113455654440110558999998
Q gi|254780465|r 193 SFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 193 ~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
..|--..++.++|.|- .|||+||++ .|+|-+.+
T Consensus 88 a~~~f~~Va~elF~dG------------~inWGRIva--l~~fa~~l 120 (192)
T 1f16_A 88 PREVFFRVAADMFSDG------------NFNWGRVVA--LFYFASKL 120 (192)
T ss_dssp HHHHHHHHHHHHTSSS------------SCCSHHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC------------CCCHHHHHH--HHHHHHHH
T ss_conf 9999999999997269------------974899999--99999999
No 190
>1t57_A Conserved protein MTH1675; structural genomics, FMN, methanobacterium thermoautotrophicum, PSI; HET: FMN; 2.30A {Methanothermobacterthermautotrophicus} SCOP: c.49.1.2
Probab=39.30 E-value=17 Score=15.35 Aligned_cols=54 Identities=17% Similarity=0.242 Sum_probs=29.0
Q ss_pred CCCCHHHHHHHHHHHHHHC---CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 0682388899999999731---79820799716654046799986166785599973577
Q gi|254780465|r 111 FKDIAMQFIAELMDHILEE---RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG 167 (469)
Q Consensus 111 FKD~a~q~l~~~~~~~l~~---~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g 167 (469)
|.+-|-+=.-..++...++ .+=+.+|+.-|||+|+-.+++.|++ ++ ++|=|..|
T Consensus 28 F~~pG~~NT~~tl~la~erA~e~gIk~iVVAStsG~TA~k~~e~~~~--~l-VvVTh~~G 84 (206)
T 1t57_A 28 FEEPGKENTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG--NI-VSVTHHAG 84 (206)
T ss_dssp ESSCSGGGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS--EE-EEECCCTT
T ss_pred ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCC--CE-EEEECCCC
T ss_conf 75888313899999999999986997799971887799999986589--79-99906468
No 191
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenase; HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=39.10 E-value=15 Score=15.76 Aligned_cols=131 Identities=16% Similarity=0.227 Sum_probs=67.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC--C----CHHHHCCCEEECCCCEEEEEECCCHHHHHH---HHH
Q ss_conf 8207997166540467999861667855999735776--7----603321311344787089971796588899---999
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR--I----SVVQQKQMTTSEASNINVIAVQSSFDDCQK---IVK 202 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~--v----S~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~---~Vk 202 (469)
+|+.|++| |..|++.+.....+.-.+-++||.-.. . -+++. +.+....++.+. .|++.||.. +|=
T Consensus 2 rKI~IiGa--G~VG~~~a~~l~~~~~~~el~LiDi~~~~~~g~a~Dl~~--~~~~~~~~~~i~--~~~~~~~~daDivvi 75 (309)
T 1hyh_A 2 RKIGIIGL--GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQD--AMANLEAHGNIV--INDWAALADADVVIS 75 (309)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH--HGGGSSSCCEEE--ESCGGGGTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHC--CCCCCCCCCEEE--CCCHHHHCCCCEEEE
T ss_conf 88999896--989999999998469999799985899725889999875--675578984794--287788568866899
Q ss_pred HHH-----CCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 975-----015431358311345565444011055899999874477887389963465788788667775089877058
Q gi|254780465|r 203 NLF-----SDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLI 277 (469)
Q Consensus 203 ~~f-----~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli 277 (469)
..- .+++-..+..|-..|. .|+-+++ .++.+.+.. .+++=.+|=-|+.+..+.|..|+|=+|++
T Consensus 76 tag~pr~~~~kpg~~R~dll~~N~----~I~~~i~------~~i~~~~p~-~ivivvsNPvd~~t~~~~k~sg~~~~rvi 144 (309)
T 1hyh_A 76 TLGNIKLQQDNPTGDRFAELKFTS----SMVQSVG------TNLKESGFH-GVLVVISNPVDVITALFQHVTGFPAHKVI 144 (309)
T ss_dssp CCSCGGGTC-------CTTHHHHH----HHHHHHH------HHHHHTTCC-SEEEECSSSHHHHHHHHHHHHCCCGGGEE
T ss_pred EECCCCCCCCCCCCCHHHHHHHHH----HHHHHHH------HHHHCCCCC-EEEEECCCCCHHHHHHHHHHCCCCHHHEE
T ss_conf 610133345799842899987667----7889999------987504983-29998178507888888861699778854
Q ss_pred EE
Q ss_conf 72
Q gi|254780465|r 278 IA 279 (469)
Q Consensus 278 ~A 279 (469)
-.
T Consensus 145 g~ 146 (309)
T 1hyh_A 145 GT 146 (309)
T ss_dssp EC
T ss_pred EH
T ss_conf 10
No 192
>2nl9_A Fusion protein consisting of induced myeloid leukemia cell differentiation protein...; apoptosis, MCL-1, BIM; HET: MSE; 1.55A {Rattus norvegicus} PDB: 2nla_A 3d7v_A 3io9_A 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 1wsx_A 2jm6_B 2roc_A 2rod_A 2kbw_A 3mk8_B
Probab=38.65 E-value=15 Score=15.64 Aligned_cols=32 Identities=25% Similarity=0.541 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 5888999999750154313583113455654440110558999998
Q gi|254780465|r 194 FDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 194 FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
.+--..+++++|.|.. +|||||++ .|+|-+.+
T Consensus 73 ~~~f~~V~~elf~dg~------------~nWGRIva--l~~F~g~l 104 (157)
T 2nl9_A 73 VKSLSRVMIHVFSDGV------------TNWGRIVT--LISFGAFV 104 (157)
T ss_dssp CHHHHHHHHHHGGGSC------------CCHHHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHCCCC------------CCHHHHHH--HHHHHHHH
T ss_conf 9999999999872688------------75569999--99999999
No 193
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase, center for structural genomics of infectious diseases; 2.35A {Vibrio cholerae}
Probab=38.30 E-value=18 Score=15.25 Aligned_cols=116 Identities=11% Similarity=0.095 Sum_probs=66.1
Q ss_pred CCEEEEECCCCCHHHHH--HHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHH
Q ss_conf 82079971665404679--9986166785599973577676033213113447870899717965888999999750154
Q gi|254780465|r 132 HYITIVGATSGDTGAAA--IKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVF 209 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa--~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~ 209 (469)
|++.+++.|-.|-|..+ +.+++..++++..++. .| | + .| +..++|.+-.
T Consensus 26 kKI~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~-TG--------q-------H---------~d----~~~~~~~~~~ 76 (396)
T 3dzc_A 26 KKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCV-TG--------Q-------H---------RE----MLDQVLELFS 76 (396)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHHHHCTTEEEEEEE-CC--------S-------S---------SH----HHHHHHHHTT
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEE-EC--------C-------C---------HH----HHHHHHHHCC
T ss_conf 61899997037099999999999738998779999-08--------9-------9---------88----9999998549
Q ss_pred HHCCCCCC-CCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 31358311-34556544401105589999987447788738996346578878866777508987705872
Q gi|254780465|r 210 FCHSVNLS-GINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA 279 (469)
Q Consensus 210 ~~~~~~l~-s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A 279 (469)
+.....+. ..++-+.+..+++++--|...+.-.+ |-.+.|-.--+--+.++..|+.|++||-++-.-
T Consensus 77 i~~d~~~~~~~~~~s~~~~~~~~i~~~~~~~~~~k---pD~VlV~GDr~e~la~a~aa~~~~ipi~HiegG 144 (396)
T 3dzc_A 77 ITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQ---PDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG 144 (396)
T ss_dssp CCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHC---CSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC
T ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC---CCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEC
T ss_conf 88873221588999899999999999999999719---999999588862254899999829978999712
No 194
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genomics, SGC stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=38.20 E-value=18 Score=15.24 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=10.1
Q ss_pred CCCCCCCC-CCHHHH-HHCCCCCC
Q ss_conf 17898888-888999-86156787
Q gi|254780465|r 5 STRNVDLS-LGFCDT-ILSGLATD 26 (469)
Q Consensus 5 STRg~~~~-~~f~~a-~~~Gla~D 26 (469)
|.+|..+. ..|+.- +..|.-+|
T Consensus 8 ~~~~~~p~~~~f~T~~vh~g~~~~ 31 (403)
T 3cog_A 8 SSQGFLPHFQHFATQAIHVGQDPE 31 (403)
T ss_dssp ---CCCCCCTTHHHHHHHTTCCGG
T ss_pred CCCCCCCCCCCCCHHHEECCCCCC
T ss_conf 866668889881434156888777
No 195
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii ME49} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 1sov_A 1sow_A* 3czm_A*
Probab=37.04 E-value=18 Score=15.12 Aligned_cols=139 Identities=15% Similarity=0.108 Sum_probs=67.8
Q ss_pred HCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC-CCH--HHH-CCCEEECCCCEEEEEECCCHHHHH---HH
Q ss_conf 31798207997166540467999861667855999735776-760--332-131134478708997179658889---99
Q gi|254780465|r 128 EERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR-ISV--VQQ-KQMTTSEASNINVIAVQSSFDDCQ---KI 200 (469)
Q Consensus 128 ~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~-vS~--~Q~-~qmtt~~~~Nv~~i~v~G~FDDcq---~~ 200 (469)
.++.+++.|++| |..|++.+.....+.-.+ ++||--.. ..+ ... .+..+..+.++++.+-++..++|. -+
T Consensus 6 ~~k~~KI~IiGa--G~VG~~~A~~l~~~~l~e-l~LiDi~~~~~~g~alDL~h~~~~~~~~~~i~~~~~~~~~~~~adiv 82 (331)
T 1pzg_A 6 VQRRKKVAMIGS--GMIGGTMGYLCALRELAD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCV 82 (331)
T ss_dssp CSCCCEEEEECC--SHHHHHHHHHHHHHTCCE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEE
T ss_pred CCCCCCEEEECC--CHHHHHHHHHHHCCCCCE-EEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHCCCEEE
T ss_conf 578993899897--989999999997189987-99990899802889998867011379966998179837761678289
Q ss_pred HHHHHCC--HH----HHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCC
Q ss_conf 9997501--54----31358311345565444011055899999874477887389963465788788667775089877
Q gi|254780465|r 201 VKNLFSD--VF----FCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIE 274 (469)
Q Consensus 201 Vk~~f~D--~~----~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~ 274 (469)
|=..-.- +. --.+..|...|. +|+-+++ -++.+....-.+ +=.+|=-|+.+..+.+..|+|=+
T Consensus 83 vitag~~rkpG~~~~~~sR~dll~~N~----~I~~~i~------~~i~~~~p~~iv-lvvtNPvd~~t~v~~k~sg~p~~ 151 (331)
T 1pzg_A 83 IVTAGLTKVPGKPDSEWSRNDLLPFNS----KIIREIG------QNIKKYCPKTFI-IVVTNPLDCMVKVMCEASGVPTN 151 (331)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHH----HHHHHHH------HHHHHHCTTCEE-EECCSSHHHHHHHHHHHHCCCGG
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHH----HHHHHHH------HHHHCCCCCEEE-EEECCCHHHHHHHHHHHCCCCCC
T ss_conf 970322125898877779999998747----7999999------988605996199-99458256799999997299832
Q ss_pred EEEEEC
Q ss_conf 058723
Q gi|254780465|r 275 KLIIAT 280 (469)
Q Consensus 275 kli~At 280 (469)
|++...
T Consensus 152 rvig~g 157 (331)
T 1pzg_A 152 MICGMA 157 (331)
T ss_dssp GEEECC
T ss_pred CCCCCC
T ss_conf 343412
No 196
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.82 E-value=19 Score=15.09 Aligned_cols=68 Identities=16% Similarity=0.067 Sum_probs=43.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++| ..+++..|+--|.|.+..|. ..+-+|++.+-+...-+.. ...+...+.+| .+-++|+++++++..
T Consensus 5 ~GK-~alITGas~GIG~aia~~la-~~Ga~V~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 73 (256)
T 2d1y_A 5 AGK-GVLVTGGARGIGRAIAQAFA-REGALVALCDLRPEGKEVA-------EAIGGAFFQVDLEDERERVRFVEEAAY 73 (256)
T ss_dssp TTC-EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSTTHHHHH-------HHHTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCC-EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHH-------HHCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf 998-89993888689999999999-8799999996887899999-------876993999868999999999999999
No 197
>2v4i_B Glutamate N-acetyltransferase 2 beta chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_D* 2vzk_B* 2w4n_B*
Probab=35.61 E-value=19 Score=14.97 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=29.3
Q ss_pred EEEEECC--CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHH
Q ss_conf 8997179--6588899999975015431358311345565444011055
Q gi|254780465|r 186 NVIAVQS--SFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIV 232 (469)
Q Consensus 186 ~~i~v~G--~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~v 232 (469)
-.+.|.| +-.|++.+-+.+-+..-.+..+ ..+--|||||+..+=
T Consensus 86 i~v~V~gA~s~~~A~~iAr~Ia~S~LVKTA~---~G~DpNWGRI~~AiG 131 (213)
T 2v4i_B 86 IEVQVTGARDDAQAKRVGKTVVNSPLVKTAV---HGCDPNWGRVAMAIG 131 (213)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTCHHHHHHH---HTTCCCHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCHHHHHHH---HCCCCCHHHHHHHHC
T ss_conf 9999727999999999999816784899987---356987889999853
No 198
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=35.32 E-value=20 Score=14.94 Aligned_cols=158 Identities=18% Similarity=0.253 Sum_probs=73.5
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCH-HHHHHH---HHCCCCCCEEEEECCCCCCCH
Q ss_conf 8825466213898120682388899999999731798207997166540-467999---861667855999735776760
Q gi|254780465|r 96 ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDT-GAAAIK---AFAGKKRINMYILFPEGRISV 171 (469)
Q Consensus 96 ~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDT-GsAa~~---a~~~~~~i~v~vlyP~g~vS~ 171 (469)
...+|. ||-|||++=|-=.. +.+- +.+.++++++.++ | .|| -.||++ .+...-++.++..+.....+.
T Consensus 127 ~~p~Vi-~~vG~~G~GKTTt~---aKlA-~~~~~~g~kv~l~-~--~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~d~~~ 198 (328)
T 3e70_C 127 EKPYVI-MFVGFNGSGKTTTI---AKLA-NWLKNHGFSVVIA-A--SDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAA 198 (328)
T ss_dssp CSSEEE-EEECCTTSSHHHHH---HHHH-HHHHHTTCCEEEE-E--ECCSSTTHHHHHHHHHHHTTCEEECCCTTCCHHH
T ss_pred CCCEEE-EEECCCCCCCCCHH---HHHH-HHHHHCCCCEEEE-E--CCCCCHHHHHHHHHHHHHHCCCEECCCCCCCHHH
T ss_conf 898699-99768778865438---9999-9999669960576-3--2324507999999998873576146789999999
Q ss_pred HHHCCCEEECCCCEEEEEEC--CC-------HHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHC
Q ss_conf 33213113447870899717--96-------5888999999750154313583113455654440110558999998744
Q gi|254780465|r 172 VQQKQMTTSEASNINVIAVQ--SS-------FDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALG 242 (469)
Q Consensus 172 ~Q~~qmtt~~~~Nv~~i~v~--G~-------FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~ 242 (469)
+-+.-+-.....|.-.+=|| |- .+..+.+.+.+ . + ....| +-+-+.+.-..+.+.-|+.++.+.
T Consensus 199 v~~~a~~~a~~~~~D~vlIDTaGR~~~~~~l~~el~~i~~~~-~--p--~~~ll--V~da~~g~~~~~~~~~f~~~~~~~ 271 (328)
T 3e70_C 199 VAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVT-K--P--NLVIF--VGDALAGNAIVEQARQFNEAVKID 271 (328)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECCSCCTTTCHHHHHHHHHHHH-C--C--SEEEE--EEEGGGTTHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC-C--C--CEEEE--ECCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 999999999986999898678777613099999999999762-9--9--74776--234212289999999986228998
Q ss_pred CCCCCEEEEE--ECCCHHHHHHHHHHHHCCCCCC
Q ss_conf 7788738996--3465788788667775089877
Q gi|254780465|r 243 SPNRNISFSV--PTGNFGDIFAGYMAKMMGLPIE 274 (469)
Q Consensus 243 ~~~~~i~f~V--PtGNfGni~Ag~~Ak~MGLPI~ 274 (469)
.+.+.= =|..+|.+++ ++...|+||.
T Consensus 272 ----g~IlTKlD~t~~~G~~ls--i~~~~~~Pi~ 299 (328)
T 3e70_C 272 ----GIILTKLDADARGGAALS--ISYVIDAPIL 299 (328)
T ss_dssp ----EEEEECGGGCSCCHHHHH--HHHHHTCCEE
T ss_pred ----EEEEEEECCCCCCCHHHH--HHHHHCCCEE
T ss_conf ----699970338986169999--9999797979
No 199
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomics consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=35.29 E-value=20 Score=14.93 Aligned_cols=63 Identities=14% Similarity=0.249 Sum_probs=25.8
Q ss_pred CCCEEEEECC-CCCHHHHHHHHHC----------CCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCC
Q ss_conf 9820799716-6540467999861----------6678559997357767603321311344787089971796
Q gi|254780465|r 131 DHYITIVGAT-SGDTGAAAIKAFA----------GKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSS 193 (469)
Q Consensus 131 ~~~~~il~AT-SGDTGsAa~~a~~----------~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~ 193 (469)
++.+.+...| ||-|-+..+-.+. ...+..++|+.|......-...++......++..+.+.|.
T Consensus 57 g~dviv~a~TGsGKTlay~lp~l~~~~~~~~~~~~~~~~~alil~PtreLa~qi~~~~~~l~~~~~~~~~~~g~ 130 (228)
T 3iuy_A 57 GIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGG 130 (228)
T ss_dssp TCCEEEECCTTSCHHHHHHHHHHHHHC---------CCCSEEEECSSHHHHHHHHHHHHHHCCTTCCEEEECC-
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 99889987899986366553289987620000001578549998285889999999999863389649999799
No 200
>1vra_B Arginine biosynthesis bifunctional protein ARGJ; 10175521, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=35.09 E-value=20 Score=14.91 Aligned_cols=43 Identities=16% Similarity=0.280 Sum_probs=29.7
Q ss_pred EEEECC--CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHH
Q ss_conf 997179--6588899999975015431358311345565444011055
Q gi|254780465|r 187 VIAVQS--SFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIV 232 (469)
Q Consensus 187 ~i~v~G--~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~v 232 (469)
.+.|.| +-.||..+.+.+-+..-.+..+ ..+-=|||||+.-+=
T Consensus 94 ~v~V~gA~s~~~A~~iA~sIanS~LVKTAi---~G~DpNWGRI~~AiG 138 (215)
T 1vra_B 94 EVEVTGAANDQEAGMVAKQIVGSDLVKTAI---YGADANWGRIICAIG 138 (215)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTCHHHHHHH---HTTCCCHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHCCCHHHHHHH---HCCCCCHHHHHHHHC
T ss_conf 999931899999999999974279999998---531888899887753
No 201
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=34.87 E-value=17 Score=15.41 Aligned_cols=157 Identities=15% Similarity=0.202 Sum_probs=72.6
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCE
Q ss_conf 9812068-238889999999973179820799716654046799986166785599973577676033213113447870
Q gi|254780465|r 107 PTLSFKD-IAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNI 185 (469)
Q Consensus 107 PT~aFKD-~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv 185 (469)
|.+.++| +.+...+..|+..|.+ ++..+--..| .++..+....+.=++++| ..=|--+-.+.. -...+
T Consensus 66 P~g~~~~~~SL~pva~~L~~~l~~---~V~f~~d~~g---~~~~~~i~~~~~G~IlLL-ENvRF~~~E~~~-~~~~~--- 134 (415)
T 1qpg_A 66 PNGERNEKYSLAPVAKELQSLLGK---DVTFLNDCVG---PEVEAAVKASAPGSVILL-ENLRYHIEEEGS-RKVDG--- 134 (415)
T ss_dssp CCSSCCGGGCSHHHHHHHHHHHTS---CCEEESCSSS---HHHHHHHHTCCTTEEEEE-CCGGGSHHHHTE-EEETT---
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCC---CEEECCCCCC---HHHHHHHHHCCCCCEEEE-ECCCCCCCHHCC-CCCCH---
T ss_conf 999879876839999999998789---7497067666---476767874787718984-201104110015-64312---
Q ss_pred EEEEECCCHHHHHHHHHHH------HCCHHHHCCCC-CCCCCCCC-----HHHCCCCHHHHHHHHHHHCC-C--------
Q ss_conf 8997179658889999997------50154313583-11345565-----44401105589999987447-7--------
Q gi|254780465|r 186 NVIAVQSSFDDCQKIVKNL------FSDVFFCHSVN-LSGINSIN-----WARIMAQIVYYFVSSIALGS-P-------- 244 (469)
Q Consensus 186 ~~i~v~G~FDDcq~~Vk~~------f~D~~~~~~~~-l~s~NSIN-----~~Ril~Q~vyYf~a~~~~~~-~-------- 244 (469)
-.....-+.+..++|++ |...+|...++ -+|...+. -||+|-+-+-+....++-.. +
T Consensus 135 --~~~~~~~~n~~~fak~LA~laDiyVNDAF~~aHR~haS~~g~~~~~s~aG~lmekEl~~L~~~l~~p~rP~~aIlGGa 212 (415)
T 1qpg_A 135 --QKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGA 212 (415)
T ss_dssp --EEEECCHHHHHHHHHHHHHTCSEEEECCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHSSCCSSEEEEECSS
T ss_pred --HHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf --332111342899999986424474305322135244522344578340138899999999999818899869997257
Q ss_pred ------------CCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf ------------88738996346578878866777508987705872
Q gi|254780465|r 245 ------------NRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA 279 (469)
Q Consensus 245 ------------~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A 279 (469)
.+.++..+-.|..+|.+- ....|..|++-.+-
T Consensus 213 KisdKi~~l~~l~~k~D~iiigG~mantfl---ka~~g~~ig~s~~e 256 (415)
T 1qpg_A 213 KVADKIQLIDNLLDKVDSIIIGGGMAFTFK---KVLENTEIGDSIFD 256 (415)
T ss_dssp CSGGGHHHHHHHTTTCSEEEECGGGHHHHH---HHHSCCCCCSCCCC
T ss_pred CHHHHHHHHHHHHHHCCEEEECCHHHHHHH---HHCCCCCCCCCCHH
T ss_conf 353589999988753011563528999998---75124626730035
No 202
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein ligase, unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=34.80 E-value=20 Score=14.88 Aligned_cols=33 Identities=30% Similarity=0.436 Sum_probs=26.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 98207997166540467999861667855999735
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFP 165 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP 165 (469)
-+++.|++| |..|++.+.......-.+-++||=
T Consensus 14 ~~KI~IiGa--G~VG~~~A~~l~~~~l~~el~L~D 46 (303)
T 2i6t_A 14 VNKITVVGG--GELGIACTLAISAKGIADRLVLLD 46 (303)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 875999997--989999999998479998799997
No 203
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolidine carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis H37RV} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 2aqh_A* 2aqk_A* ...
Probab=34.79 E-value=20 Score=14.88 Aligned_cols=70 Identities=6% Similarity=0.051 Sum_probs=40.4
Q ss_pred CCCCEEEEECC--CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 79820799716--654046799986166785599973577676033213113447870899717-9658889999997
Q gi|254780465|r 130 RDHYITIVGAT--SGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 130 ~~~~~~il~AT--SGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
++|.+.|.+|. || -|.|.+.+|. ..+.+|++.+-.. .+..++.. ...+.+...+.++ -+.+|++.+++++
T Consensus 6 ~gK~~lItGaag~~G-IG~aiA~~la-~~Ga~Vvi~~~~~--~~l~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~i 78 (269)
T 2h7i_A 6 DGKRILVSGIITDSS-IAFHIARVAQ-EQGAQLVLTGFDR--LRLIQRIT-DRLPAKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp TTCEEEECCCSSTTS-HHHHHHHHHH-HTTCEEEEEECSC--HHHHHHHH-TTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCH-HHHHHHHHHH-HCCCEEEEEECCH--HHHHHHHH-HHHCCCCEEEEEEEECHHHHHHHHHHH
T ss_conf 888799989999977-9999999999-8699999996883--78999999-970887508999862227799999999
No 204
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 1mg5_A*
Probab=34.69 E-value=20 Score=14.87 Aligned_cols=74 Identities=12% Similarity=0.313 Sum_probs=42.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEECC--CHHHHHHHHHHHHC
Q ss_conf 79820799716654046799986166785599973577-6760332131134478708997179--65888999999750
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQS--SFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~G--~FDDcq~~Vk~~f~ 206 (469)
++|.+.|-+|+ +--|.|.+..|.. .+.++++..=.. +....++.+-. ..+.++..+.++- +.++++++++++..
T Consensus 4 ~gK~~lITGas-~GIG~aiA~~la~-~Ga~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 4 TNKNVIFVAAL-GGIGLDTSRELVK-RNLKNFVILDRVENPTALAELKAI-NPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-TCCSEEEEEESSCCHHHHHHHHHH-CTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-CCCEEEEEECCCCCHHHHHHHHHH-CCCCCEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 99999995388-8899999999998-799799997885568999999961-78998699993248989999999999999
No 205
>2v65_A LDH-A, L-lactate dehydrogenase A chain; oxidoreductase, NAD, FISH, cytoplasm, glycolysis, psychrophIle; 2.35A {Champsocephalus gunnari}
Probab=34.51 E-value=9.7 Score=17.06 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHC----CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 8899999999731----7982079971665404679998616678559997357
Q gi|254780465|r 117 QFIAELMDHILEE----RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPE 166 (469)
Q Consensus 117 q~l~~~~~~~l~~----~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~ 166 (469)
.+-..++.|.+.+ +..++.|++| |..|++.+......+-++-++||=.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~KV~IiGa--G~VG~~~a~~l~~~~~~~el~L~Di 53 (331)
T 2v65_A 2 STKEKLISHVMKEEPVGSRSKVTVVGV--GMVGMASAISILLKDLCDELAMVDV 53 (331)
T ss_dssp CHHHHHCCCCCCSCCCCCSSCEEEECC--SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCHHHHHHHHHCCCCCCCCCEEEEECC--CHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 706889987742277779997999897--8899999999984699887999818
No 206
>2wh6_A Early antigen protein R; mitochondrion, early protein, transmembrane, viral protein, apoptosis; 1.50A {Human herpesvirus 4} PDB: 2v6q_A 1q59_A
Probab=33.61 E-value=21 Score=14.75 Aligned_cols=25 Identities=16% Similarity=0.321 Sum_probs=15.1
Q ss_pred HHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHH
Q ss_conf 8899999975015431358311345565444011055
Q gi|254780465|r 196 DCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIV 232 (469)
Q Consensus 196 Dcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~v 232 (469)
+-.++..++|.| ..+|||||++=..
T Consensus 95 ~F~~V~~EiF~D------------G~~NWGRIVa~fa 119 (173)
T 2wh6_A 95 DFNSVFLEIFHR------------GDPSLGRALAWMA 119 (173)
T ss_dssp HHHHHHHHHHSS------------SCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHC------------CCCCHHHHHHHHH
T ss_conf 999999999836------------9985999999999
No 207
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=33.47 E-value=21 Score=14.74 Aligned_cols=75 Identities=20% Similarity=0.200 Sum_probs=43.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC------CCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHH
Q ss_conf 820799716654046799986166785599973577------67603321311344787089971796588899999975
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG------RISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLF 205 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g------~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f 205 (469)
.|..|++..|+--|.|.+..|. ..+-+|++.+=.. +-.+..+...-............-.+.++++.+|+++.
T Consensus 9 gKvalITGas~GIG~aiA~~la-~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 87 (319)
T 1gz6_A 9 GRVVLVTGAGGGLGRAYALAFA-ERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
T ss_conf 9889995858789999999999-869989999577214332203899999999975204601102341799999999999
Q ss_pred CC
Q ss_conf 01
Q gi|254780465|r 206 SD 207 (469)
Q Consensus 206 ~D 207 (469)
..
T Consensus 88 ~~ 89 (319)
T 1gz6_A 88 DT 89 (319)
T ss_dssp HH
T ss_pred HH
T ss_conf 96
No 208
>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.46 E-value=21 Score=14.74 Aligned_cols=149 Identities=19% Similarity=0.186 Sum_probs=76.1
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHH
Q ss_conf 99999999731798207997166540467999861667855999735776760332131134478708997179658889
Q gi|254780465|r 119 IAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQ 198 (469)
Q Consensus 119 l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq 198 (469)
|..++......++-. +...+||-.-|+--|..-.++++++|= .|+...+=|+. -++-++.|.-+.-|--
T Consensus 16 l~~l~~~~a~~~~~~---~~~~~~~l~~~~~iA~~l~~~~DVIIS--RGgTa~~Ir~~------~~iPVVeI~vs~~Dil 84 (196)
T 2q5c_A 16 LLNLFPKLALEKNFI---PITKTASLTRASKIAFGLQDEVDAIIS--RGATSDYIKKS------VSIPSISIKVTRFDTM 84 (196)
T ss_dssp HHHHHHHHHHHHTCE---EEEEECCHHHHHHHHHHHTTTCSEEEE--EHHHHHHHHTT------CSSCEEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCE---EEEEEEEHHHHHHHHHHHHCCCCEEEE--CCHHHHHHHHH------CCCCEEEECCCHHHHH
T ss_conf 999999999754875---678866699999999975439879998--96589999982------8997799807887999
Q ss_pred HHHHHHHCCHHHHCCCCCCC-CCCCCHHHCCCCHH------HHH------HHH-HHHCCCCCCEEEEEECCCHHHHHHHH
Q ss_conf 99999750154313583113-45565444011055------899------999-87447788738996346578878866
Q gi|254780465|r 199 KIVKNLFSDVFFCHSVNLSG-INSINWARIMAQIV------YYF------VSS-IALGSPNRNISFSVPTGNFGDIFAGY 264 (469)
Q Consensus 199 ~~Vk~~f~D~~~~~~~~l~s-~NSIN~~Ril~Q~v------yYf------~a~-~~~~~~~~~i~f~VPtGNfGni~Ag~ 264 (469)
+.++++ +....++.+.+ -|.+++.+.+.++. |.+ ... .++.+.+ +..+| |...++-
T Consensus 85 ~al~~a---~~~~~kiavvgf~~~~~~~~~i~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G--~~vvV-----G~~~~~~ 154 (196)
T 2q5c_A 85 RAVYNA---KRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTEN--IKIVV-----SGKTVTD 154 (196)
T ss_dssp HHHHHH---GGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTT--CCEEE-----ECHHHHH
T ss_pred HHHHHH---HHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC--CCEEE-----CCHHHHH
T ss_conf 999999---9758978999678501589999998599559999668899999999999869--98999-----9879999
Q ss_pred HHHHCCCCCCEEEEECCCCCHHHHHHH
Q ss_conf 777508987705872367633567753
Q gi|254780465|r 265 MAKMMGLPIEKLIIATNENDTLVRMFD 291 (469)
Q Consensus 265 ~Ak~MGLPI~kli~AtN~NdiL~rf~~ 291 (469)
+|+++|+| .+.+-+ ..+.+.+.|+
T Consensus 155 ~A~~~Gl~--~ili~S-g~eSI~~Al~ 178 (196)
T 2q5c_A 155 EAIKQGLY--GETINS-GEESLRRAIE 178 (196)
T ss_dssp HHHHTTCE--EEECCC-CHHHHHHHHH
T ss_pred HHHHCCCC--EEEEEC-CHHHHHHHHH
T ss_conf 99985997--899965-4999999999
No 209
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=33.42 E-value=21 Score=14.73 Aligned_cols=160 Identities=11% Similarity=0.184 Sum_probs=77.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CC---------CHHHH-CCCEEECCCCEEEEEEC-CCHHHHHH
Q ss_conf 820799716654046799986166785599973577-67---------60332-13113447870899717-96588899
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RI---------SVVQQ-KQMTTSEASNINVIAVQ-SSFDDCQK 199 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~v---------S~~Q~-~qmtt~~~~Nv~~i~v~-G~FDDcq~ 199 (469)
.|..+++..|+--|.|.+..|.. .+-+|++.+=.. +. .+.++ .+.....+.+++.+.+| .+.++|++
T Consensus 46 GKvalVTGas~GIG~aiA~~la~-~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~ 124 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQ-DGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHH-TTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
T ss_conf 98799928786899999999998-79989998375211002231048999999999999729818999834899999999
Q ss_pred HHHHHHCCHHHHCCCC-------------CCCCCCCCHHHCCCCHHHH-HH---HHH-HHC-C-CCCCE-EEEEECCCHH
Q ss_conf 9999750154313583-------------1134556544401105589-99---998-744-7-78873-8996346578
Q gi|254780465|r 200 IVKNLFSDVFFCHSVN-------------LSGINSINWARIMAQIVYY-FV---SSI-ALG-S-PNRNI-SFSVPTGNFG 258 (469)
Q Consensus 200 ~Vk~~f~D~~~~~~~~-------------l~s~NSIN~~Ril~Q~vyY-f~---a~~-~~~-~-~~~~i-~f~VPtGNfG 258 (469)
+++++... | .++. +....-=.|-+++---++- |+ +.+ .+. + .+..| +++=-.|..|
T Consensus 125 ~~~~~~~~--~-G~iDiLVnnAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IInisS~~~~~~ 201 (317)
T 3oec_A 125 VVDEALAE--F-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG 201 (317)
T ss_dssp HHHHHHHH--H-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred HHHHHHHH--C-CCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC
T ss_conf 99999997--5-99978998999999999023999999999999739999999999999998689966999846665778
Q ss_pred H-HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCC-CCCCCCCCCC
Q ss_conf 8-788667775089877058723676335677532220102-3455656420
Q gi|254780465|r 259 D-IFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPE-IVMETTSPAM 308 (469)
Q Consensus 259 n-i~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~-~~~~T~SpsM 308 (469)
. -.+.|-|-|.|+- -|.|.+.. +|.+. -.+.+++|-+
T Consensus 202 ~~~~~~Y~asKaav~------------~ltr~lA~-Ela~~gIrVN~V~PG~ 240 (317)
T 3oec_A 202 APGQSHYAASKHGVQ------------GLMLSLAN-EVGRHNIRVNSVNPGA 240 (317)
T ss_dssp CTTBHHHHHHHHHHH------------HHHHHHHH-HHGGGTEEEEEEEECS
T ss_pred CCCCHHHHHHHHHHH------------HHHHHHHH-HHHHHCEEEEEEECCC
T ss_conf 999778999999999------------99999999-8603191899996188
No 210
>2knq_A General secretion pathway protein H; GSPH, minor pseudopilin, methylation, transport protein, Pro transport; NMR {Escherichia coli}
Probab=32.95 E-value=20 Score=14.85 Aligned_cols=36 Identities=8% Similarity=0.182 Sum_probs=25.0
Q ss_pred CEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCC
Q ss_conf 559997357767603321311344787089971796
Q gi|254780465|r 158 INMYILFPEGRISVVQQKQMTTSEASNINVIAVQSS 193 (469)
Q Consensus 158 i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~ 193 (469)
.--++|+|.|-+|+++-.-.....++-++.+.++|.
T Consensus 94 ~Pqil~~psGE~TPF~L~~~~~~~~~~~~~l~~dG~ 129 (142)
T 2knq_A 94 QPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGS 129 (142)
T ss_dssp SCSEEECTTSBBCCEEEEEEETTTCCEEEEEEESSB
T ss_pred CCEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCC
T ss_conf 982999478876787999842788883599995796
No 211
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=32.71 E-value=21 Score=14.65 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=23.6
Q ss_pred HHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 99997317982079971665404679998616678559997
Q gi|254780465|r 123 MDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYIL 163 (469)
Q Consensus 123 ~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vl 163 (469)
++.+-+..++++.|+|| |+.|...+..+.. .+.++.+.
T Consensus 13 ~~~~~~~~~kkilvIGa--G~~~~~~a~~L~~-~~~~v~v~ 50 (144)
T 3oj0_A 13 YDIVRKNGGNKILLVGN--GMLASEIAPYFSY-PQYKVTVA 50 (144)
T ss_dssp HHHHHHHCCCEEEEECC--SHHHHHHGGGCCT-TTCEEEEE
T ss_pred HHHHHHCCCCEEEEECC--HHHHHHHHHHHHH-CCCEEEEE
T ss_conf 99998639999999997--8999999999985-69846898
No 212
>1qbj_A Protein (double-stranded RNA specific adenosine deaminase (ADAR1)); protein/Z-DNA complex, hydrolase/DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A
Probab=32.46 E-value=8.2 Score=17.56 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=27.1
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCC
Q ss_conf 7886677750898770587236763356775322201023
Q gi|254780465|r 260 IFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEI 299 (469)
Q Consensus 260 i~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~ 299 (469)
++|..+||+.|+| | ...|.+|+++.+.|.-.+..
T Consensus 28 ~tA~~LAk~lg~~--K----k~vN~~LY~L~k~g~v~~~~ 61 (81)
T 1qbj_A 28 TTAHDLSGKLGTP--K----KEINRVLYSLAKKGKLQKEA 61 (81)
T ss_dssp BCHHHHHHHHTCC--H----HHHHHHHHHHHHTTSEEEES
T ss_pred HHHHHHHHHHCCC--H----HHHHHHHHHHHHCCCEEECC
T ss_conf 2199999996988--8----89899999999879864069
No 213
>3bdm_F Proteasome component C1; ubiquitin, proteolysis, pathogen, virulence factor, cytoplasm, hydrolase, nucleus, protease; HET: GDT; 2.70A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1fnt_G* 2zcy_F* 1z7q_G
Probab=32.29 E-value=22 Score=14.61 Aligned_cols=24 Identities=13% Similarity=0.012 Sum_probs=19.4
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHH
Q ss_conf 4787089971796588899999975
Q gi|254780465|r 181 EASNINVIAVQSSFDDCQKIVKNLF 205 (469)
Q Consensus 181 ~~~Nv~~i~v~G~FDDcq~~Vk~~f 205 (469)
..+++ .+++-|..-|||.+++.+-
T Consensus 69 I~~~i-~~a~sG~~aD~~~l~~~~r 92 (287)
T 3bdm_F 69 VDRHI-GCVYSGLIPDGRHLVNRGR 92 (287)
T ss_dssp ETTTE-EEEEEECHHHHHHHHHHHH
T ss_pred ECCCE-EEEEEECHHHHHHHHHHHH
T ss_conf 77980-7999875688999999999
No 214
>2v7p_A L-lactate dehydrogenase; oxidoreductase, phosphorylation, NAD, cytoplasm, glycolysis, thermophIle; HET: NAD; 2.10A {Thermus thermophilus} PDB: 2e37_A* 2v6m_A*
Probab=31.96 E-value=22 Score=14.57 Aligned_cols=139 Identities=17% Similarity=0.139 Sum_probs=69.1
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC------CCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHC
Q ss_conf 20799716654046799986166785599973577------676033213113447870899717965888999999750
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG------RISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFS 206 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g------~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~ 206 (469)
++.|++| |..|++.+......+-++=++||=.. .+-+++. ..+. ..++..- .|++.|| .
T Consensus 2 KV~IiGa--G~VG~~la~~l~~~~~~~el~L~Di~~~~~~g~a~Dl~~--~~~~-~~~~~i~--~~~~~~l--------~ 66 (310)
T 2v7p_A 2 KVGIVGS--GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILH--ATPF-AHPVWVR--AGSYGDL--------E 66 (310)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHT--TGGG-SCCCEEE--EECGGGG--------T
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHHC--CCCC-CCCEEEE--CCCHHHH--------C
T ss_conf 7999996--989999999998469988799993889856452276554--2624-7873783--4987895--------5
Q ss_pred CHHHHCCCCCCCCCCC----CHHHCCCCHHHHHHHH-HHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 1543135831134556----5444011055899999-8744778873899634657887886677750898770587236
Q gi|254780465|r 207 DVFFCHSVNLSGINSI----NWARIMAQIVYYFVSS-IALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATN 281 (469)
Q Consensus 207 D~~~~~~~~l~s~NSI----N~~Ril~Q~vyYf~a~-~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN 281 (469)
|.++ +-+++-.+- +-.-++..-+--+... .++.+.+..- +++-.+|==|+.+..+.|..|+|=+|++-.-.
T Consensus 67 ~adi---vvitag~~~kpg~~R~dl~~~Na~I~~~i~~~i~~~~p~~-ivivvsNPvd~~~~~~~k~sg~~~~rvig~gt 142 (310)
T 2v7p_A 67 GARA---VVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEA-VLLVATNPVDVMTQVAYRLSGLPPGRVVGSGT 142 (310)
T ss_dssp TCSE---EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTC-EEEECSSSHHHHHHHHHHHHCCCGGGEEECTT
T ss_pred CCCE---EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE-EEEEECCCCCHHHHHHHHHCCCCHHHCCCCCH
T ss_conf 6888---9984688899998878888865899999999873259973-99992687438999999970989044115550
Q ss_pred CCCH--HHHHH
Q ss_conf 7633--56775
Q gi|254780465|r 282 ENDT--LVRMF 290 (469)
Q Consensus 282 ~Ndi--L~rf~ 290 (469)
.-|. +.+++
T Consensus 143 ~LDs~R~~~~i 153 (310)
T 2v7p_A 143 ILDTARFRALL 153 (310)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 89999999999
No 215
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=31.70 E-value=22 Score=14.54 Aligned_cols=68 Identities=9% Similarity=0.249 Sum_probs=41.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
.+|.. +++..|+--|.|.+..|.. .+-+|++.+-.. ..+++ .. ....+++.+.+| .+.++++++++++
T Consensus 6 ~GK~a-lITGas~GIG~aia~~la~-~Ga~V~~~~r~~--~~l~~--~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~ 74 (244)
T 3d3w_A 6 AGRRV-LVTGAGKGIGRGTVQALHA-TGARVVAVSRTQ--ADLDS--LV-RECPGIEPVCVDLGDWEATERALGSV 74 (244)
T ss_dssp TTCEE-EEESTTSHHHHHHHHHHHH-TTCEEEEEESCH--HHHHH--HH-HHSTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCCEE-EEECCCCHHHHHHHHHHHH-CCCEEEEEECCH--HHHHH--HH-HHCCCCEEEEEECCCHHHHHHHHHHC
T ss_conf 99989-9938975999999999998-799999997999--99999--99-86589749998289999999999971
No 216
>3it4_B Arginine biosynthesis bifunctional protein ARGJ beta chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_B
Probab=31.68 E-value=22 Score=14.54 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=28.0
Q ss_pred EEEECC--CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHH
Q ss_conf 997179--6588899999975015431358311345565444011055
Q gi|254780465|r 187 VIAVQS--SFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIV 232 (469)
Q Consensus 187 ~i~v~G--~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~v 232 (469)
.+.|.| +-.|+..+.+.+-+..-.+..+ ..+--|||||+.-+=
T Consensus 88 ~v~V~gA~s~~~A~~iA~~Ia~S~LVKtAi---~G~DpNWGRIlaAiG 132 (205)
T 3it4_B 88 TVTVTGAATEDDALVAARQIARDSLVKTAL---FGSDPNWGRVLAAVG 132 (205)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHCHHHHHHH---HTTCCCHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHHCHHHHHHH---HCCCCCHHHHHHCCC
T ss_conf 999945876799999999984159999998---468998788644012
No 217
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=31.53 E-value=22 Score=14.52 Aligned_cols=63 Identities=10% Similarity=0.123 Sum_probs=43.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+|. .+++..|+--|.|.+..|.. .+-+|++.+-.. ...+++..+.+| .+.++++++++++...
T Consensus 15 gK~-alITGas~GIG~aia~~la~-~Ga~V~~~~r~~------------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (247)
T 1uzm_A 15 SRS-VLVTGGNRGIGLAIAQRLAA-DGHKVAVTHRGS------------GAPKGLFGVEVDVTDSDAVDRAFTAVEEH 78 (247)
T ss_dssp CCE-EEETTTTSHHHHHHHHHHHH-TTCEEEEEESSS------------CCCTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCE-EEEECCCCHHHHHHHHHHHH-CCCEEEEEECCC------------CHHCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 987-99938888899999999998-799899997982------------11067549996369999999999999997
No 218
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A*
Probab=31.32 E-value=23 Score=14.50 Aligned_cols=74 Identities=9% Similarity=0.049 Sum_probs=45.3
Q ss_pred CCCCEEEEEC-CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHC
Q ss_conf 7982079971-6654046799986166785599973577676033213113447870899717965888999999750
Q gi|254780465|r 130 RDHYITIVGA-TSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~A-TSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~ 206 (469)
++|.+.|-++ .|.=-|.|.+.+|. ..+-+|++.|-.. -.+..+ +.....+..+.......+.+++++++.++..
T Consensus 25 ~gK~~lITG~a~s~GIG~aiA~~la-~~Ga~Vii~~~~~-~~~~~~-~~~~~~~~~~~~~~d~~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMH-REGAELAFTYVGQ-FKDRVE-KLCAEFNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHH-HTTCEEEEEECTT-CHHHHH-HHHGGGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEEEEECCC-HHHHHH-HHHHHCCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf 9988999799887389999999999-8699999996882-599999-9998439714676102042889999999999
No 219
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A
Probab=31.16 E-value=23 Score=14.48 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=19.1
Q ss_pred CCCEEEEECC-CCCHHHHHHHHHCC-------CCCCEEEEECCCCCC
Q ss_conf 9820799716-65404679998616-------678559997357767
Q gi|254780465|r 131 DHYITIVGAT-SGDTGAAAIKAFAG-------KKRINMYILFPEGRI 169 (469)
Q Consensus 131 ~~~~~il~AT-SGDTGsAa~~a~~~-------~~~i~v~vlyP~g~v 169 (469)
++.+.+...| ||-|-+-.+-.... ..+..++|+-|....
T Consensus 38 g~dvi~~a~TGsGKTlay~lp~l~~~~~~~~~~~~~~alil~PtreL 84 (207)
T 2gxq_A 38 GKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTREL 84 (207)
T ss_dssp TCCEEEECCTTSCHHHHHHHHHHHHCCCCCCTTCCCSEEEECSSHHH
T ss_pred CCCEEEECCCCCCCCCEEECCHHHHHCCCCCCCCCCEEEEEECCHHH
T ss_conf 99889988899997434305077653011003689879999798999
No 220
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=30.58 E-value=11 Score=16.65 Aligned_cols=91 Identities=15% Similarity=0.199 Sum_probs=59.2
Q ss_pred EEEEECCCHHHHHHHH-HHHHCC--CCCCEEEEECCCCCHHHHHHH--CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8996346578878866-777508--987705872367633567753--22201023455656420013401378899987
Q gi|254780465|r 249 SFSVPTGNFGDIFAGY-MAKMMG--LPIEKLIIATNENDTLVRMFD--MGMYRPEIVMETTSPAMDIQIPSNFERLLFEI 323 (469)
Q Consensus 249 ~f~VPtGNfGni~Ag~-~Ak~MG--LPI~kli~AtN~NdiL~rf~~--tG~y~~~~~~~T~SpsMDI~v~SNfERllf~l 323 (469)
.+.+|+.+-=+..-.+ -..+.| |=++|.-+..|..++|++|+. .|.-.-.....+.|=.| .|...+++++--.+
T Consensus 298 llyiP~~~p~~~~~~~~~~~~~~i~LY~krVfI~d~~~~LLP~wl~FvrGVVDS~DLpLNvSRE~-LQ~d~~l~kI~~~i 376 (666)
T 2o1u_A 298 ILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRET-LQQHKLLKVIRKKL 376 (666)
T ss_dssp EEEECSSCCC------------CEEEEETTEEEESCCCTTSCGGGTTCEEEEEESSSCSSSCHHH-HHTCHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHCHHHHHHHCCEECCCCCCCCCHHHH-HHHHHHHHHHHHHH
T ss_conf 99711458444454432430476489973038605454438287753211200112675410555-54239999999999
Q ss_pred HCCCHHHHHHHHHHHCCCCCC
Q ss_conf 097089999998752026510
Q gi|254780465|r 324 SGRNSLLVKEAFYSLENKKYF 344 (469)
Q Consensus 324 ~~~d~~~v~~~m~~l~~~g~~ 344 (469)
+.+|..++.++..+..|
T Consensus 377 ----~kkv~~~L~~la~~e~y 393 (666)
T 2o1u_A 377 ----VRKTLDMIKKIADEKYN 393 (666)
T ss_dssp ----HHHHHHHHHHSCHHHHH
T ss_pred ----HHHHHHHHHHHCCHHHH
T ss_conf ----99999999874000479
No 221
>1ii2_A Phosphoenolpyruvate carboxykinase; phosphate binding loop, lyase; 2.00A {Trypanosoma cruzi} SCOP: c.91.1.1 c.109.1.1
Probab=30.46 E-value=16 Score=15.46 Aligned_cols=15 Identities=13% Similarity=0.357 Sum_probs=6.9
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 138899999999999
Q gi|254780465|r 362 RASMEDVNSVIKSVL 376 (469)
Q Consensus 362 svsDeet~~~Ik~~y 376 (469)
++.=+.|.+.|..+.
T Consensus 427 Ri~l~~Tr~ii~ai~ 441 (524)
T 1ii2_A 427 RMPLRVTRAIIDAIH 441 (524)
T ss_dssp ECCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
T ss_conf 628899999999997
No 222
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=30.28 E-value=23 Score=14.38 Aligned_cols=124 Identities=19% Similarity=0.214 Sum_probs=66.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCC------CCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHH
Q ss_conf 82079971665404679998616678559997357------767603321311344787089971796588899999975
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPE------GRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLF 205 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~------g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f 205 (469)
+++.|++| |..|++.+......+-.+ ++||-- |..-+++. .....+.++.+. ..++++||.
T Consensus 3 ~KV~iiGa--G~VG~~~a~~l~~~~l~e-l~L~D~~~~~~~g~a~DL~~--~~~~~~~~~~v~-~~~~~~~~~------- 69 (309)
T 1ur5_A 3 KKISIIGA--GFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGKALDLYE--ASPIEGFDVRVT-GTNNYADTA------- 69 (309)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHT--THHHHTCCCCEE-EESCGGGGT-------
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCCE-EEEECCCCCHHHHHHHHHHH--HHCCCCCCCEEE-ECCCHHHHC-------
T ss_conf 74999997--989999999998489987-99980898711538988872--211268886797-159989968-------
Q ss_pred CCHHH------------HCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC
Q ss_conf 01543------------135831134556544401105589999987447788738996346578878866777508987
Q gi|254780465|r 206 SDVFF------------CHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPI 273 (469)
Q Consensus 206 ~D~~~------------~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI 273 (469)
|.+. ..+..|-..|.-..-.+.+ ++.+.+.. .+++=.+|=-|+.+.+.++..|+|=
T Consensus 70 -dadivvitag~~~kpg~~R~dll~~Na~i~k~i~~----------~i~~~~p~-~~v~vvtNPvd~~~~i~~~~sg~~~ 137 (309)
T 1ur5_A 70 -NSDVIVVTSGAPRKPGMSREDLIKVNADITRACIS----------QAAPLSPN-AVIIMVNNPLDAMTYLAAEVSGFPK 137 (309)
T ss_dssp -TCSEEEECCCC--------CHHHHHHHHHHHHHHH----------HHGGGCTT-CEEEECCSSHHHHHHHHHHHHCCCG
T ss_pred -CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH----------HHHHHCCC-EEEEEECCCCCHHHHHHHHHCCCCH
T ss_conf -99999986898899998878887767999999987----------87632998-0999946871089999999759975
Q ss_pred CEEEEEC
Q ss_conf 7058723
Q gi|254780465|r 274 EKLIIAT 280 (469)
Q Consensus 274 ~kli~At 280 (469)
+|++-..
T Consensus 138 ~rvig~g 144 (309)
T 1ur5_A 138 ERVIGQA 144 (309)
T ss_dssp GGEEECC
T ss_pred HHEEECC
T ss_conf 7788513
No 223
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=30.17 E-value=24 Score=14.37 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=37.5
Q ss_pred EEEECCCCCHHHHHHHHHCCCCCCEEEEEC-CCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHH
Q ss_conf 799716654046799986166785599973-57767603321311344787089971796588899999
Q gi|254780465|r 135 TIVGATSGDTGAAAIKAFAGKKRINMYILF-PEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVK 202 (469)
Q Consensus 135 ~il~ATSGDTGsAa~~a~~~~~~i~v~vly-P~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk 202 (469)
++++..||-.|++.++.+... +-+|.++- +..+.+......+......+|..+ .|+..|-..+.+
T Consensus 7 ILVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v--~~D~~~~~~~~~ 72 (313)
T 1qyd_A 7 VLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI--EASLDDHQRLVD 72 (313)
T ss_dssp EEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE--CCCSSCHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEE--EEECCCCHHHHH
T ss_conf 999899848999999999978-896999989974356566777765204896899--964211045788
No 224
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, fatty acid biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii}
Probab=29.98 E-value=24 Score=14.35 Aligned_cols=69 Identities=9% Similarity=0.203 Sum_probs=41.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNL 204 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~ 204 (469)
++|. .+++..|+--|.|.+..|.. .+-+|++.+-.. ...++ .....++++..+.+| .+-++|++++++.
T Consensus 13 ~gK~-alVTGas~GIG~aia~~la~-~Ga~V~i~~r~~--~~l~~--~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 82 (249)
T 3f9i_A 13 TGKT-SLITGASSGIGSAIARLLHK-LGSKVIISGSNE--EKLKS--LGNALKDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp TTCE-EEETTTTSHHHHHHHHHHHH-TTCEEEEEESCH--HHHHH--HHHHHCSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCE-EEEECCCCHHHHHHHHHHHH-CCCEEEEEECCH--HHHHH--HHHHHCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 8998-99938787899999999998-799999997999--99999--99985668349987899999999999975
No 225
>3lls_A 3-ketoacyl-(acyl-carrier-protein) reductase; niaid, emerald biostructures, UW, SBRI, oxidoreductase, structural genomics; 2.40A {Mycobacterium tuberculosis}
Probab=29.98 E-value=24 Score=14.35 Aligned_cols=14 Identities=7% Similarity=0.285 Sum_probs=8.0
Q ss_pred CCCCCCHHHHHHHH
Q ss_conf 20013401378899
Q gi|254780465|r 307 AMDIQIPSNFERLL 320 (469)
Q Consensus 307 sMDI~v~SNfERll 320 (469)
..||......+++.
T Consensus 286 ~~Dvtd~~~v~~lv 299 (475)
T 3lls_A 286 WLDVTADDAVDKIS 299 (475)
T ss_dssp ECCTTSTTHHHHHH
T ss_pred EECCCCHHHHHHHH
T ss_conf 94379899999999
No 226
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=29.58 E-value=24 Score=14.31 Aligned_cols=124 Identities=19% Similarity=0.240 Sum_probs=66.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC------CCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577------676033213113447870899717965888999999
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG------RISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKN 203 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g------~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~ 203 (469)
+..++.|++| |..|++.+...+...-..=++||=-. ..-+++.. .+..+.+ .+ ..|++.||
T Consensus 4 ~~~KV~IiGa--G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~DL~~~--~~~~~~~--~i-~~~~~~~~------ 70 (318)
T 1ez4_A 4 NHQKVVLVGD--GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDA--QAFTAPK--KI-YSGEYSDC------ 70 (318)
T ss_dssp TBCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGG--GGGSCCC--EE-EECCGGGG------
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCC--CCCCCCC--EE-ECCCHHHH------
T ss_conf 9987999897--9899999999982799887999758998455565666516--5456883--67-24998996------
Q ss_pred HHCCHHHH------------CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
Q ss_conf 75015431------------358311345565444011055899999874477887389963465788788667775089
Q gi|254780465|r 204 LFSDVFFC------------HSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGL 271 (469)
Q Consensus 204 ~f~D~~~~------------~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGL 271 (469)
.|.++. .+..|-..|.--.-.+.+ ++.+.+..-.+.| .+|=-|+.+..+.|..|+
T Consensus 71 --~~aDivvitaG~~~k~g~~R~dll~~Na~i~~~~~~----------~i~~~~p~~iviv-vsNPvd~~t~~~~k~sg~ 137 (318)
T 1ez4_A 71 --KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVK----------PVVDSGFDGIFLV-AANPVDILTYATWKFSGF 137 (318)
T ss_dssp --TTCSEEEECCCC----------CHHHHHHHHHHHHH----------HHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCC
T ss_pred --CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH----------HHHHHCCCCEEEE-ECCCCCHHHHHHHHHCCC
T ss_conf --799899994897789999868999888999999999----------9996257838999-658851789999997198
Q ss_pred CCCEEEEE
Q ss_conf 87705872
Q gi|254780465|r 272 PIEKLIIA 279 (469)
Q Consensus 272 PI~kli~A 279 (469)
|=+|.+-.
T Consensus 138 ~~~rvig~ 145 (318)
T 1ez4_A 138 PKERVIGS 145 (318)
T ss_dssp CGGGEEEC
T ss_pred CCHHEEEC
T ss_conf 81208773
No 227
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=28.82 E-value=25 Score=14.22 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=28.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 798207997166540467999861667855999735
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFP 165 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP 165 (469)
+..|+.|++| |..|++.+.......-++-++||=
T Consensus 6 ~~~KV~IiGa--G~VG~~~a~~l~~~~l~~el~L~D 39 (319)
T 1lld_A 6 KPTKLAVIGA--GAVGSTLAFAAAQRGIAREIVLED 39 (319)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 9985999997--989999999998179998799995
No 228
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=28.67 E-value=25 Score=14.20 Aligned_cols=21 Identities=33% Similarity=0.264 Sum_probs=14.3
Q ss_pred ECCCCCCCCCCCHHHHHHHHH
Q ss_conf 213898120682388899999
Q gi|254780465|r 103 LFHGPTLSFKDIAMQFIAELM 123 (469)
Q Consensus 103 LfHGPT~aFKD~a~q~l~~~~ 123 (469)
||+|||+.=|-.=++-+|..+
T Consensus 54 Ll~GPpG~GKT~lAkalA~~l 74 (310)
T 1ofh_A 54 LMIGPTGVGKTEIARRLAKLA 74 (310)
T ss_dssp EEECCTTSSHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHH
T ss_conf 998999988889999998874
No 229
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=28.63 E-value=25 Score=14.20 Aligned_cols=12 Identities=17% Similarity=0.379 Sum_probs=5.3
Q ss_pred CHHHHHHHHHHH
Q ss_conf 658889999997
Q gi|254780465|r 193 SFDDCQKIVKNL 204 (469)
Q Consensus 193 ~FDDcq~~Vk~~ 204 (469)
+-||.....+++
T Consensus 164 ~~~d~~~aa~~L 175 (312)
T 2yxt_A 164 SQEEALRVMDML 175 (312)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 889999999999
No 230
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=28.51 E-value=25 Score=14.18 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=24.3
Q ss_pred HHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 997317982079971665404679998616678559
Q gi|254780465|r 125 HILEERDHYITIVGATSGDTGAAAIKAFAGKKRINM 160 (469)
Q Consensus 125 ~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v 160 (469)
|..+.+.-++.|++| |-+|+.++..++....+.+
T Consensus 10 ~~~~~~~mki~vlG~--G~vG~~~~~~L~~~~~v~~ 43 (365)
T 2z2v_A 10 HHIEGRHMKVLILGA--GNIGRAIAWDLKDEFDVYI 43 (365)
T ss_dssp ------CCEEEEECC--SHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCCCCEEEEECC--CHHHHHHHHHHHCCCCEEE
T ss_conf 211587257999997--5999999999864798699
No 231
>1y2y_A Ribosome biogenesis protein NOP10; box H/ACA snoRNA,snoRNP, pseudouridine, biosynthetic protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.16.1 PDB: 2aqa_A
Probab=28.46 E-value=11 Score=16.67 Aligned_cols=10 Identities=40% Similarity=0.919 Sum_probs=7.5
Q ss_pred ECCCCCCCHH
Q ss_conf 7188434988
Q gi|254780465|r 409 ATAHPSKFPD 418 (469)
Q Consensus 409 ATAHPaKFpe 418 (469)
-.||||+|+.
T Consensus 28 ~sAHPArFSP 37 (58)
T 1y2y_A 28 KSAHPARFSP 37 (58)
T ss_dssp SSSCSSSSCS
T ss_pred ECCCCCCCCC
T ss_conf 0336774686
No 232
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=28.44 E-value=25 Score=14.17 Aligned_cols=126 Identities=14% Similarity=0.117 Sum_probs=66.3
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC-CCHHHH---CCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCH
Q ss_conf 207997166540467999861667855999735776-760332---1311344787089971796588899999975015
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR-ISVVQQ---KQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDV 208 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~-vS~~Q~---~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~ 208 (469)
|+.|++| |..|++.+......+.+.=++||=... ..+-+. .++.+....+..... .++.++| .|.
T Consensus 2 KV~IiGa--G~VG~~~A~~l~~~~~~~el~L~Di~~~~a~g~a~DL~h~~~~~~~~~~v~~-~~~~~~~--------~~a 70 (294)
T 1oju_A 2 KLGFVGA--GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG-GADYSLL--------KGS 70 (294)
T ss_dssp EEEEECC--SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE-ESCGGGG--------TTC
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEC-CCCHHHC--------CCC
T ss_conf 7999996--9889999999984799887999938898228899998663655899874653-7897892--------888
Q ss_pred HHH------------CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 431------------35831134556544401105589999987447788738996346578878866777508987705
Q gi|254780465|r 209 FFC------------HSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKL 276 (469)
Q Consensus 209 ~~~------------~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kl 276 (469)
++. .+..|-..|. +|+.+++ .++.+.. +-.+++..+|==|+.+..+.+..|+|=+|.
T Consensus 71 dvvvitag~~~~~g~~R~dll~~N~----~i~~~~~------~~i~~~~-p~~ivivvsNPvd~~t~~~~~~sg~~~~~v 139 (294)
T 1oju_A 71 EIIVVTAGLARKPGMTRLDLAHKNA----GIIKDIA------KKIVENA-PESKILVVTNPMDVMTYIMWKESGKPRNEV 139 (294)
T ss_dssp SEEEECCCCCCCSSCCHHHHHHHHH----HHHHHHH------HHHHTTS-TTCEEEECSSSHHHHHHHHHHHSCCCTTSE
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHH----HHHHHHH------HHHHHHC-CCEEEEECCCCCCHHHHHHHHHHCCCCCCE
T ss_conf 7899941478899987466654557----9999999------9998419-980999527863113499999829995128
Q ss_pred EEEC
Q ss_conf 8723
Q gi|254780465|r 277 IIAT 280 (469)
Q Consensus 277 i~At 280 (469)
+-..
T Consensus 140 ~g~g 143 (294)
T 1oju_A 140 FGMG 143 (294)
T ss_dssp EECS
T ss_pred EECC
T ss_conf 9717
No 233
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=28.32 E-value=25 Score=14.16 Aligned_cols=45 Identities=7% Similarity=0.065 Sum_probs=28.9
Q ss_pred CCCEEEEECCCCC-HHHHHHHHHC---CCCCCEEEEECCCCCCCHHHHC
Q ss_conf 9820799716654-0467999861---6678559997357767603321
Q gi|254780465|r 131 DHYITIVGATSGD-TGAAAIKAFA---GKKRINMYILFPEGRISVVQQK 175 (469)
Q Consensus 131 ~~~~~il~ATSGD-TGsAa~~a~~---~~~~i~v~vlyP~g~vS~~Q~~ 175 (469)
+.++-|+.+|-|+ ++++.+++.. |.+++..+-++|...+.++.++
T Consensus 2 ~~~I~ili~sHG~~~A~gl~~~~~~i~G~~~~~~i~~~~~~~~~~~~~~ 50 (130)
T 3gx1_A 2 NAQVEVIVMMHGRSTATSMVETVQELLSIESGIALDMPLTVEVKAMYEK 50 (130)
T ss_dssp CSSCEEEEEEESSSHHHHHHHHHHHHHTCCCCEEEEECTTSCHHHHHHH
T ss_pred CCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
T ss_conf 9865699984987999999999999749987699981599998999999
No 234
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=28.27 E-value=25 Score=14.15 Aligned_cols=60 Identities=20% Similarity=0.301 Sum_probs=25.3
Q ss_pred EEEEECC-CCCHHHHHHH---HHCCCCCCEEEEECCCCCCCHHHHCCCEEE-CCCCEEEEEECCC
Q ss_conf 0799716-6540467999---861667855999735776760332131134-4787089971796
Q gi|254780465|r 134 ITIVGAT-SGDTGAAAIK---AFAGKKRINMYILFPEGRISVVQQKQMTTS-EASNINVIAVQSS 193 (469)
Q Consensus 134 ~~il~AT-SGDTGsAa~~---a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~-~~~Nv~~i~v~G~ 193 (469)
+.|...| ||-|-.+.+. ......+..++|+.|.......+...+... ...++.+..+.|+
T Consensus 47 vlv~apTGsGKT~~~~lp~l~~~~~~~~~~~li~~p~~~l~~q~~~~~~~~~~~~~~~v~~~~g~ 111 (367)
T 1hv8_A 47 IVAQARTGSGKTASFAIPLIELVNENNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGG 111 (367)
T ss_dssp EEEECCSSSSHHHHHHHHHHHHSCSSSSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTT
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 99988999769999999999986542896699995106766777889998731589569999799
No 235
>3gr6_A Enoyl-[acyl-carrier-protein] reductase [NADH]; enoyl reductase, NADP, triclosan, oxidoreductase; HET: NAP TCL; 2.28A {Staphylococcus aureus} PDB: 3gns_A* 3gnt_A
Probab=28.12 E-value=26 Score=14.14 Aligned_cols=76 Identities=7% Similarity=0.115 Sum_probs=45.0
Q ss_pred HCCCCCEEEEECCCC-CHHHHHHHHHCCCCCCEEEEECCCCC-CCHHHHCCCEEECCCCEEEEEECC-CHHHHHHHHHHH
Q ss_conf 317982079971665-40467999861667855999735776-760332131134478708997179-658889999997
Q gi|254780465|r 128 EERDHYITIVGATSG-DTGAAAIKAFAGKKRINMYILFPEGR-ISVVQQKQMTTSEASNINVIAVQS-SFDDCQKIVKNL 204 (469)
Q Consensus 128 ~~~~~~~~il~ATSG-DTGsAa~~a~~~~~~i~v~vlyP~g~-vS~~Q~~qmtt~~~~Nv~~i~v~G-~FDDcq~~Vk~~ 204 (469)
.-++|.+.|.+|+|| =-|.|.+..|. ..+-+|++.+-..+ ..++++ +.......+.+.+..+- +-++.+..+..+
T Consensus 7 ~l~~K~~lItGaas~~GIG~aiA~~la-~~G~~V~i~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (260)
T 3gr6_A 7 NLENKTYVIMGIANKRSIAFGVAKVLD-QLGAKLVFTYRKERSRKELEK-LLEQLNQPEAHLYQIDVQSDEEVINGFEQI 84 (260)
T ss_dssp CCSSCEEEEECCCSTTCHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHH-HTCSSCCSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-HHHHCCCCCEEEEEEECHHHHHHHHHHHHH
T ss_conf 989998999899998479999999999-879999999688888999999-987446774379984110156777899999
Q ss_pred H
Q ss_conf 5
Q gi|254780465|r 205 F 205 (469)
Q Consensus 205 f 205 (469)
.
T Consensus 85 ~ 85 (260)
T 3gr6_A 85 G 85 (260)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 236
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural genomics consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=27.97 E-value=26 Score=14.12 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=14.2
Q ss_pred EEEECCCCCCCHHHHHHHHC-CCCCCCHHHHHHHC
Q ss_conf 99971884349888999808-79888988988741
Q gi|254780465|r 406 VTLATAHPSKFPDTVKAASG-IVPDCPISLEQMMR 439 (469)
Q Consensus 406 VvLATAHPaKFpe~V~~Aig-~~~~~P~~L~~l~~ 439 (469)
+.+-|-+-.+.-..+.+.+. ...++|+.|.++..
T Consensus 377 ~~~~~~~~~~~~~~i~~~l~~~~~~vp~~l~~~~~ 411 (417)
T 2i4i_A 377 TSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY 411 (417)
T ss_dssp EEEECGGGGGGHHHHHHHHHHTTCCCCHHHHHHHT
T ss_pred EEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 99973789999999999998702836899999888
No 237
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B}
Probab=27.76 E-value=26 Score=14.09 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=43.7
Q ss_pred CCCCEEEEECCC-CCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 798207997166-54046799986166785599973577676033213113447870899717-965888999999750
Q gi|254780465|r 130 RDHYITIVGATS-GDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 130 ~~~~~~il~ATS-GDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
++|...|-+|++ .=-|.|.+..|. ..+-+|++.+=..+.-+ +..+.....+. ...+.+| .+.++++++++++..
T Consensus 13 ~gK~alITGaa~s~GIG~aiA~~la-~~Ga~V~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~Dv~d~~~~~~~~~~~~~ 88 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACK-REGAELAFTYVGDRFKD-RITEFAAEFGS-ELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHH-HHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHH-HHHHHHHHCCC-EEEEEEECCCHHHHHHHHHHHHH
T ss_conf 7998999899876089999999999-86999999958878899-99999974497-38999733887999999999998
No 238
>3g7k_A 3-methylitaconate isomerase; DAPF family fold, closed conformation, open conformation; 2.70A {Eubacterium barkeri}
Probab=27.57 E-value=23 Score=14.39 Aligned_cols=108 Identities=20% Similarity=0.241 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCH--------HHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH-
Q ss_conf 65888999999750154313583113455654--------440110558999998744778873899634657887886-
Q gi|254780465|r 193 SFDDCQKIVKNLFSDVFFCHSVNLSGINSINW--------ARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAG- 263 (469)
Q Consensus 193 ~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~--------~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag- 263 (469)
+-..-+.+.-.++.-.+-+.--.++.++|..- .|--+-+-|-| .|+.-....|+ =+||.||++||
T Consensus 30 d~~~~d~~ll~~mGSpD~rQiDGlGGg~s~tSKvaIV~~S~~~~~DVDY~F---~QV~v~~~~VD---~~~NCGN~~saV 103 (391)
T 3g7k_A 30 DQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTHPDADVDYTF---AQVSITDAVVD---YNGNCGNISAGV 103 (391)
T ss_dssp SHHHHHHHHHHHHTCSCTTCTTSSSCSSGGGSEEEEEEECCSTTCSEEEEE---EEECSSSSCEE---CSSCCHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE---EEEECCCCEEE---CCCCCCCHHHHC
T ss_conf 878999999997189980211677677666635999915877885047888---87523664441---344544245403
Q ss_pred -HHHHHCCC-CC----CEE-EEECCCCCHHHHHHH--------CCCHHCCCCCCCCCC
Q ss_conf -67775089-87----705-872367633567753--------222010234556564
Q gi|254780465|r 264 -YMAKMMGL-PI----EKL-IIATNENDTLVRMFD--------MGMYRPEIVMETTSP 306 (469)
Q Consensus 264 -~~Ak~MGL-PI----~kl-i~AtN~NdiL~rf~~--------tG~y~~~~~~~T~Sp 306 (469)
-+|-.+|| |. .++ |--+|.+.+++--+. .|+++-..|.-|-||
T Consensus 104 gpfAie~GLV~~~~~~t~VRI~n~NT~k~i~~~v~~~~G~~~~~Gd~~IdGVpGt~a~ 161 (391)
T 3g7k_A 104 GPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNAP 161 (391)
T ss_dssp HHHHHHTTSSCCCSSEEEEEEEETTTCCEEEEEEEEETTEECCCCSBCCTTSSSCBCC
T ss_pred CHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCC
T ss_conf 0568867872368994589999717898799999757982021066232577888882
No 239
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfuration; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=27.56 E-value=26 Score=14.07 Aligned_cols=14 Identities=43% Similarity=0.377 Sum_probs=6.8
Q ss_pred EEECCCCCHHHHHHHHH
Q ss_conf 99716654046799986
Q gi|254780465|r 136 IVGATSGDTGAAAIKAF 152 (469)
Q Consensus 136 il~ATSGDTGsAa~~a~ 152 (469)
.++.+|| -||+.++
T Consensus 151 a~~fsSG---MAAIsav 164 (464)
T 1ibj_A 151 AFCFTSG---MAALSAV 164 (464)
T ss_dssp EEEESSH---HHHHHHH
T ss_pred EEEEHHH---HHHHHHH
T ss_conf 9983269---9999999
No 240
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoid, oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.55 E-value=26 Score=14.07 Aligned_cols=67 Identities=16% Similarity=0.170 Sum_probs=36.3
Q ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCC--HHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 820799716654046799986166785599973577676--0332131134478708997179658889999997
Q gi|254780465|r 132 HYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRIS--VVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNL 204 (469)
Q Consensus 132 ~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS--~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~ 204 (469)
+++ +++..||-.|++.+.++... +.++.+|-=...-+ ..+..+ .....+|..+ .|+.+|-..+.+.+
T Consensus 11 ~KV-lV~GaTG~iG~~lv~~Ll~~-g~~V~vl~R~~~~~~~k~~~~~--~l~~~gv~~v--~gD~~d~~~l~~a~ 79 (346)
T 3i6i_A 11 GRV-LIAGATGFIGQFVATASLDA-HRPTYILARPGPRSPSKAKIFK--ALEDKGAIIV--YGLINEQEAMEKIL 79 (346)
T ss_dssp CCE-EEECTTSHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHH--HHHHTTCEEE--ECCTTCHHHHHHHH
T ss_pred CEE-EEECCCCHHHHHHHHHHHHC-CCCEEEEECCCCCCHHHHHHHH--HHHHCCCEEE--EEECCCCCHHHHHH
T ss_conf 919-99898968999999999968-9948999899987755789998--8750893899--93055510399996
No 241
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=27.53 E-value=9.7 Score=17.05 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=27.5
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCC
Q ss_conf 7886677750898770587236763356775322201023
Q gi|254780465|r 260 IFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEI 299 (469)
Q Consensus 260 i~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~ 299 (469)
++|-.+||+.|+| | ...|.+|+++-+.|.-.+..
T Consensus 32 ~tA~~LAk~lg~~--K----k~vN~~LY~L~k~g~v~~~~ 65 (77)
T 1qgp_A 32 TTAHDLSGKLGTP--K----KEINRVLYSLAKKGKLQKEA 65 (77)
T ss_dssp EEHHHHHHHHCCC--H----HHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHCCC--H----HHHHHHHHHHHHCCCEEECC
T ss_conf 0299999996988--8----88899999999878953069
No 242
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=27.52 E-value=26 Score=14.07 Aligned_cols=66 Identities=15% Similarity=0.263 Sum_probs=39.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHH
Q ss_conf 79820799716654046799986166785599973577-676033213113447870899717-965888999999
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKN 203 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~ 203 (469)
++|...|.+| |+--|.|.+..|. ..+-+|++.+=.. +..++++ ...+++.+.+| .+.|++++++++
T Consensus 6 ~gK~alITGa-s~GIG~aia~~la-~~Ga~V~~~~r~~~~l~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~ 73 (244)
T 1cyd_A 6 SGLRALVTGA-GKGIGRDTVKALH-ASGAKVVAVTRTNSDLVSLAK------ECPGIEPVCVDLGDWDATEKALGG 73 (244)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH------HSTTCEEEECCTTCHHHHHHHHTT
T ss_pred CCCEEEEECC-CCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH------HCCCCEEEEEECCCHHHHHHHHHH
T ss_conf 9998999488-8689999999999-879999999798899999998------648974999838999999999985
No 243
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=26.76 E-value=23 Score=14.43 Aligned_cols=46 Identities=24% Similarity=0.235 Sum_probs=22.6
Q ss_pred CCCCCCCCH--HHHHHHHHH-----HHHHCCCCCEEEEECCCCCHHHHHHHHHC
Q ss_conf 981206823--888999999-----99731798207997166540467999861
Q gi|254780465|r 107 PTLSFKDIA--MQFIAELMD-----HILEERDHYITIVGATSGDTGAAAIKAFA 153 (469)
Q Consensus 107 PT~aFKD~a--~q~l~~~~~-----~~l~~~~~~~~il~ATSGDTGsAa~~a~~ 153 (469)
.+..+||.. -+-.++.+- ..+.+++++ .+|+-+.|-|....-+.+.
T Consensus 28 ~~~~~~d~~~~~~~aa~~i~~~i~~k~~~~~~~~-~vl~LsGGsTP~~~Y~~L~ 80 (312)
T 3e15_A 28 KYLEAKDLTDFNQKSAYYICHQIAEKQLSKEGGH-VVIGLSGGKTPIDVYKNIA 80 (312)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHSTTCC-CEEEECCSHHHHHHHHHHT
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEECCCCCHHHHHHHHH
T ss_conf 5896068878999999999999998786465998-8999689801999999999
No 244
>3lra_A Disks large homolog 1, maguk P55 subfamily member protein LIN-7 homolog C; tripartite complex, L27 tetramer, cell junction; 2.95A {Homo sapiens} PDB: 1rso_A 1y74_A
Probab=26.25 E-value=27 Score=13.91 Aligned_cols=72 Identities=18% Similarity=0.296 Sum_probs=47.0
Q ss_pred HHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHH
Q ss_conf 67753222010234556564200134013788999870970899999987520265105520221100012134213889
Q gi|254780465|r 287 VRMFDMGMYRPEIVMETTSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASME 366 (469)
Q Consensus 287 ~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDe 366 (469)
|+-+..-+|.+.....+ |.| .-+.+++| |..++-++.+.+...|. ++...+..+++...|
T Consensus 175 HD~VAqk~y~p~~~~v~--Ppl--~~~~~l~~--------d~~r~V~Lv~~~q~~g~--~~~~~l~~~~~~~~~------ 234 (254)
T 3lra_A 175 HDTVAQKNYDLEVLFQG--PAL--GEPVRLER--------DICRAIELLEKLQRSGE--VPPQKLQALQRVLQS------ 234 (254)
T ss_dssp HHHHHTTCCCHHHHHTH--HHH--CSHHHHHH--------HHHHHHHHHHHHHHTTS--SCCHHHHHHHHHHHC------
T ss_pred HHHHHHCCCCCCCCCCC--CCC--CCCCCCCH--------HHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHH------
T ss_conf 99987402598655689--998--77654403--------57899999987522589--984899999999999------
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999986
Q gi|254780465|r 367 DVNSVIKSVLEK 378 (469)
Q Consensus 367 et~~~Ik~~y~~ 378 (469)
+-..+||.+|+.
T Consensus 235 ~~~~~~r~~~~~ 246 (254)
T 3lra_A 235 EFCNAVREVYEH 246 (254)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 245
>2qe7_A ATP synthase subunit alpha; blockage of ATP hydrolysis, F1-ATPase, single particle analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP} PDB: 1sky_B
Probab=26.20 E-value=28 Score=13.91 Aligned_cols=26 Identities=15% Similarity=-0.028 Sum_probs=13.2
Q ss_pred HHHHCCCHHCCCCCCCCCCCCCCCCH
Q ss_conf 77532220102345565642001340
Q gi|254780465|r 288 RMFDMGMYRPEIVMETTSPAMDIQIP 313 (469)
Q Consensus 288 rf~~tG~y~~~~~~~T~SpsMDI~v~ 313 (469)
+.+..|.|-.-.+..++|--|+-...
T Consensus 347 ~La~~g~~PAId~~~S~SRv~~~~~~ 372 (502)
T 2qe7_A 347 DLFYSGVRPAVNVGISVSRVGGAAQI 372 (502)
T ss_dssp HHHTTTCSSCBCTTTCEESSGGGGSC
T ss_pred HHHHCCCCCCCCCCCCHHHCCCHHHH
T ss_conf 78867999973876025434861556
No 246
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=26.09 E-value=27 Score=13.95 Aligned_cols=98 Identities=9% Similarity=0.141 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCEEEECCC-----CCEEEEECCCCCCCCCCCHHHHHHHHH-HH----HHHCCCCCEEE
Q ss_conf 998999999999863047667860477248-----825466213898120682388899999-99----97317982079
Q gi|254780465|r 67 IKSSKLRDIVNRSYHCFRNAAVTPLIQLNA-----NEFLLELFHGPTLSFKDIAMQFIAELM-DH----ILEERDHYITI 136 (469)
Q Consensus 67 i~~~~l~~ii~~ay~~f~~~~~~pl~~l~~-----~~~vlELfHGPT~aFKD~a~q~l~~~~-~~----~l~~~~~~~~i 136 (469)
|++++|.+++++.|+.-. ++++ |.-+-. .-++.-=.|=|.- ..+..++ .. .....+..+++
T Consensus 26 Is~e~l~~ll~~~~~~~~-~~~l-IID~R~~~Ey~~gHI~gAiNip~~-------~~~~~~l~~~~~~~~~~~k~~~vI~ 96 (175)
T 2a2k_A 26 ISPETMVALLTGKFSNIV-DKFV-IVDCRYPYEYEGGHIKTAVNLPLE-------RDAESFLLKSPIAPCSLDKRVILIF 96 (175)
T ss_dssp ECHHHHHHHHTTTTTTTE-EEEE-EEECSCHHHHHTCEETTCEECCSH-------HHHHHHHHSSCCCC----CEEEEEE
T ss_pred ECHHHHHHHHHCCCCCCC-CCEE-EEECCCHHHHHCCCCCCCCCCCCH-------HHHHHHHHHCHHHHHHCCCCCCEEE
T ss_conf 489999999955321466-8889-997788777528735774637836-------7888876423001444158951899
Q ss_pred EECCCCCHHHHHHHHHCCC----------CCCEEEEECCCCCCCHHHHC
Q ss_conf 9716654046799986166----------78559997357767603321
Q gi|254780465|r 137 VGATSGDTGAAAIKAFAGK----------KRINMYILFPEGRISVVQQK 175 (469)
Q Consensus 137 l~ATSGDTGsAa~~a~~~~----------~~i~v~vlyP~g~vS~~Q~~ 175 (469)
.|.+||+.|..++..++.. .--+|+|| +||.+..++.
T Consensus 97 yC~~s~~r~~~~a~~l~~~~~~~~~~~~lg~~~VyvL--~GGf~~f~~~ 143 (175)
T 2a2k_A 97 HSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYIL--KGGYKEFFPQ 143 (175)
T ss_dssp ECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEE--TTHHHHHTTT
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE--CCCHHHHHHH
T ss_conf 8068883229999999998887501335789869997--7928999987
No 247
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=25.54 E-value=28 Score=13.83 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=18.3
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHCCH
Q ss_conf 787089971796588899999975015
Q gi|254780465|r 182 ASNINVIAVQSSFDDCQKIVKNLFSDV 208 (469)
Q Consensus 182 ~~Nv~~i~v~G~FDDcq~~Vk~~f~D~ 208 (469)
++....+.=.|+|+.|+++|+++++..
T Consensus 290 ~~~~~~~~Gtgnf~~C~~~v~~ll~~~ 316 (456)
T 3cj1_A 290 GSAIVSLSGTSNATLCRDLVSRLFNIS 316 (456)
T ss_dssp -CCEEEEEECCCHHHHHHHHHTTCCCS
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCC
T ss_conf 761354257778899999999985447
No 248
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* 3jq7_A* 3jq8_A* ...
Probab=25.50 E-value=28 Score=13.82 Aligned_cols=73 Identities=11% Similarity=0.236 Sum_probs=41.8
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CC-CHHHHCCCEEECCCCEEEEEECCCH-----HHHHHHHHH
Q ss_conf 9820799716654046799986166785599973577-67-6033213113447870899717965-----888999999
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RI-SVVQQKQMTTSEASNINVIAVQSSF-----DDCQKIVKN 203 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~v-S~~Q~~qmtt~~~~Nv~~i~v~G~F-----DDcq~~Vk~ 203 (469)
+.++.|++..|+--|.|.+..|. ..+-+|++.+=.. +. ..+. .++....+..+..+.++-.- ++|++++++
T Consensus 22 ~gkvAlITGas~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~~-~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~lv~~ 99 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLH-QTGYRVVIHYHNSAEAAVSLA-DELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHH-HHTCEEEEEESSCHHHHHHHH-HHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHHHHHHHH-HHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99989995868789999999999-879989999698078999999-9999853985699984035416479999999999
Q ss_pred HH
Q ss_conf 75
Q gi|254780465|r 204 LF 205 (469)
Q Consensus 204 ~f 205 (469)
+.
T Consensus 100 ~~ 101 (288)
T 2x9g_A 100 CF 101 (288)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 249
>2qy9_A Cell division protein FTSY; SRP receptor, protein targeting, simibi class GTPase, cell cycle, GTP-binding, inner membrane, membrane; 1.90A {Escherichia coli} SCOP: a.24.13.1 c.37.1.10 PDB: 1fts_A
Probab=25.34 E-value=29 Score=13.80 Aligned_cols=210 Identities=20% Similarity=0.289 Sum_probs=91.5
Q ss_pred CCCCHHHHHHHHHHHH----CCCCCC-HHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHH
Q ss_conf 0999899999999875----157899-89999999998630476678604772488254662138981206823888999
Q gi|254780465|r 47 RGLSYQEIALFIFRLF----IGQEIK-SSKLRDIVNRSYHCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAE 121 (469)
Q Consensus 47 ~~~sy~e~a~~il~~f----~~~~i~-~~~l~~ii~~ay~~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~ 121 (469)
++.++ +++.+|++.. .+.++. .+.+..++.+.....-.+...|+..-....++. ||=||+++=|-=.. +.
T Consensus 44 aDV~~-~~a~~ii~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~p~vi-l~vG~nG~GKTTTi---aK 118 (309)
T 2qy9_A 44 ADVGV-ETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKAPFVI-LMVGVNGVGKTTTI---GK 118 (309)
T ss_dssp TTCCH-HHHHHHHHHHHHHHHHTTCCBGGGHHHHHHHHHHHHHHTTCCCCCCCSCTTEEE-EEECCTTSCHHHHH---HH
T ss_pred CCCCH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-EEECCCCCCCCCHH---HH
T ss_conf 59988-999999999998734356785999999999999874102233111146898699-99657666765507---89
Q ss_pred HHHHHHHCCCCCEEEEECCCCCHH-HHHHHH---HCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC--CCHH
Q ss_conf 999997317982079971665404-679998---6166785599973577676033213113447870899717--9658
Q gi|254780465|r 122 LMDHILEERDHYITIVGATSGDTG-AAAIKA---FAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ--SSFD 195 (469)
Q Consensus 122 ~~~~~l~~~~~~~~il~ATSGDTG-sAa~~a---~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~--G~FD 195 (469)
+- +.+.++++++ .++| +||- .||++- +..+-++.++.-+.....+.+-+.-+-.....|.-.+=|| |---
T Consensus 119 LA-~~~~~~~~~V-~lva--~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~d~~~i~~~~~~~a~~~~~D~vliDTaGR~~ 194 (309)
T 2qy9_A 119 LA-RQFEQQGKSV-MLAA--GDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQ 194 (309)
T ss_dssp HH-HHHHTTTCCE-EEEC--CCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHHHHTTCSEEEECCCCCGG
T ss_pred HH-HHHHHCCCCC-EEEE--CCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 99-9998567761-4864--453065499999998752498377337888799999999999997699899968988776
Q ss_pred HHHHHHHHH------HC--CHHHHCCCCCCCCCCCCHH-HCCCCHHHHHHHHHHHCCCCCCEEEEE--ECCCHHHHHHHH
Q ss_conf 889999997------50--1543135831134556544-401105589999987447788738996--346578878866
Q gi|254780465|r 196 DCQKIVKNL------FS--DVFFCHSVNLSGINSINWA-RIMAQIVYYFVSSIALGSPNRNISFSV--PTGNFGDIFAGY 264 (469)
Q Consensus 196 Dcq~~Vk~~------f~--D~~~~~~~~l~s~NSIN~~-Ril~Q~vyYf~a~~~~~~~~~~i~f~V--PtGNfGni~Ag~ 264 (469)
-=..+..++ .. |........| +-+-+.+ .-+-| +.-|+....+. .+.+.= =|..+|.+++
T Consensus 195 ~~~~lm~EL~~i~~~~~~~~~~~p~e~~L--Vlda~~g~~~~~~-~~~f~~~~~~~----g~IlTKlD~t~k~G~~ls-- 265 (309)
T 2qy9_A 195 NKSHLMEELKKIVRVMKKLDVEAPHEVML--TIDASTGQNAVSQ-AKLFHEAVGLT----GITLTKLDGTAKGGVIFS-- 265 (309)
T ss_dssp GHHHHHHHHHHHHHHHTTTCTTCCSEEEE--EEEGGGTHHHHHH-HHHHHHHSCCC----EEEEECCTTCTTTTHHHH--
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCEEEE--ECCCCCCHHHHHH-HHHHCCCCCCC----EEEEECCCCCCCCCHHHH--
T ss_conf 78999999999999987533678724565--1003233779999-98623126887----799954347887649999--
Q ss_pred HHHHCCCCCC
Q ss_conf 7775089877
Q gi|254780465|r 265 MAKMMGLPIE 274 (469)
Q Consensus 265 ~Ak~MGLPI~ 274 (469)
++...|+||.
T Consensus 266 ~~~~~~~Pi~ 275 (309)
T 2qy9_A 266 VADQFGIPIR 275 (309)
T ss_dssp HHHHHCCCEE
T ss_pred HHHHHCCCEE
T ss_conf 9999897979
No 250
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic transport, mRNA export, protein interaction; HET: ADP; 3.19A {Homo sapiens}
Probab=25.09 E-value=29 Score=13.77 Aligned_cols=48 Identities=17% Similarity=0.220 Sum_probs=29.6
Q ss_pred HHHHHHHCCCCCEEEEECC-CCCHHHHHHHHH----CCCCCCEEEEECCCCCC
Q ss_conf 9999973179820799716-654046799986----16678559997357767
Q gi|254780465|r 122 LMDHILEERDHYITIVGAT-SGDTGAAAIKAF----AGKKRINMYILFPEGRI 169 (469)
Q Consensus 122 ~~~~~l~~~~~~~~il~AT-SGDTGsAa~~a~----~~~~~i~v~vlyP~g~v 169 (469)
.+...|...++.+.+...| ||-|=+.++-++ ....+..++||.|..-.
T Consensus 122 aip~il~~~g~dvlv~apTGSGKTlaf~lP~l~~l~~~~~~~~~lil~PtreL 174 (479)
T 3fmp_B 122 ALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYEL 174 (479)
T ss_dssp HHHHHTSBSCCEEEEECCSSSSHHHHHHHHHHTTCCTTSCSCCEEEECSSHHH
T ss_pred HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHH
T ss_conf 99999816899589984898379999999999976313788669999465999
No 251
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Vibrio parahaemolyticus AQ3810}
Probab=24.62 E-value=29 Score=13.71 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=43.3
Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHC
Q ss_conf 0799716654046799986166785599973577-676033213113447870899717-965888999999750
Q gi|254780465|r 134 ITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG-RISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFS 206 (469)
Q Consensus 134 ~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g-~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~ 206 (469)
+++++..|+-.|.|.+..|. ..+-++++..=.. +..++++ ..+.+++.+.+| .+.++++++++++..
T Consensus 3 iVlITGassGIG~a~A~~la-~~G~~V~l~~R~~~~l~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYD-AEGKATYLTGRSESKLSTVTN-----CLSNNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHH-----TCSSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH-----HHCCCCCEEEEECCCHHHHHHHHHHHCC
T ss_conf 99991877199999999999-879989999899999999999-----8543468897006999999999998588
No 252
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3o8q_B*
Probab=24.52 E-value=29 Score=13.70 Aligned_cols=129 Identities=16% Similarity=0.229 Sum_probs=58.0
Q ss_pred CCCCCCCHHHHHHCCCCCCC---CCCCCCCCCCCCHHH-HHHH---------CCCCHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 98888888999861567878---632861078889889-9877---------0999899999999875157899899999
Q gi|254780465|r 8 NVDLSLGFCDTILSGLATDG---GLYIPKYIPRLSEKE-IKDL---------RGLSYQEIALFIFRLFIGQEIKSSKLRD 74 (469)
Q Consensus 8 g~~~~~~f~~a~~~Gla~DG---GL~vP~~~p~~~~~~-~~~~---------~~~sy~e~a~~il~~f~~~~i~~~~l~~ 74 (469)
|+-...|.+-.+.+-+...- +.|.|..++.=+... +..+ -+++|.+-+... + +++++..
T Consensus 15 G~PI~hSlSP~ihn~~f~~~gi~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~----~-d~l~~~A--- 86 (281)
T 3o8q_A 15 GNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRF----A-DRLTERA--- 86 (281)
T ss_dssp CCSSSCCCHHHHHHHHHHHTTCCEEEEEECCCTTCHHHHHHHHHHTTCCEEEECTTSHHHHHHH----C-SEECHHH---
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH----C-CCCCHHH---
T ss_conf 5785201359999999998699928987655888999999999847987168740213577622----2-5578788---
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC
Q ss_conf 99998630476678604772488254662138981206823888999999997317982079971665404679998616
Q gi|254780465|r 75 IVNRSYHCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAG 154 (469)
Q Consensus 75 ii~~ay~~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~ 154 (469)
+.... +=.+.+..++.+.-.-. | +..++..+.+......++++.|++| |-++.|++.+...
T Consensus 87 ---~~iga-----vNTv~~~~dg~l~G~NT--------D-~~G~~~~l~~~~~~~~~~~vlilGa--GGaa~ai~~al~~ 147 (281)
T 3o8q_A 87 ---RLAGA-----VNTLKKLDDGEILGDNT--------D-GEGLVQDLLAQQVLLKGATILLIGA--GGAARGVLKPLLD 147 (281)
T ss_dssp ---HHHTC-----CSEEEECTTSCEEEECC--------H-HHHHHHHHHHTTCCCTTCEEEEECC--SHHHHHHHHHHHT
T ss_pred ---HHHCC-----CCEEEECCCCEEEEEEC--------C-HHHHHHCCCCCCCCCCCCEEEEECC--HHHHHHHHHHHHH
T ss_conf ---87266-----53488767987999955--------7-1665403000255766666999654--3658999999986
Q ss_pred CCCCEEEEE
Q ss_conf 678559997
Q gi|254780465|r 155 KKRINMYIL 163 (469)
Q Consensus 155 ~~~i~v~vl 163 (469)
...-++.|.
T Consensus 148 ~g~~~i~v~ 156 (281)
T 3o8q_A 148 QQPASITVT 156 (281)
T ss_dssp TCCSEEEEE
T ss_pred CCCCEEECC
T ss_conf 488642211
No 253
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=23.88 E-value=30 Score=13.62 Aligned_cols=21 Identities=29% Similarity=0.466 Sum_probs=10.5
Q ss_pred EEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 38996346578878866777508
Q gi|254780465|r 248 ISFSVPTGNFGDIFAGYMAKMMG 270 (469)
Q Consensus 248 i~f~VPtGNfGni~Ag~~Ak~MG 270 (469)
+.+.|+.| |-++|+.+|+.+|
T Consensus 29 ~IvgI~rg--G~~~a~~la~~L~ 49 (153)
T 1vdm_A 29 VIIGVARG--GLIPAVRLSHILG 49 (153)
T ss_dssp EEEEETTT--THHHHHHHHHHTT
T ss_pred EEEEECCC--CHHHHHHHHHHHC
T ss_conf 99998888--6899999999868
No 254
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxidoreductase; 2.22A {Candida tropicalis}
Probab=23.85 E-value=30 Score=13.62 Aligned_cols=36 Identities=11% Similarity=-0.010 Sum_probs=19.0
Q ss_pred HHHHHHHHHHH---CCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999875---1578998999999999863047667
Q gi|254780465|r 52 QEIALFIFRLF---IGQEIKSSKLRDIVNRSYHCFRNAA 87 (469)
Q Consensus 52 ~e~a~~il~~f---~~~~i~~~~l~~ii~~ay~~f~~~~ 87 (469)
.+++.++-+.. +.+--+.++.+++++++.+.|..-|
T Consensus 55 ~~~~~ei~~~~~~~~~D~~~~~~~~~~v~~~~~~~G~iD 93 (604)
T 2et6_A 55 DVVVDEIVKNGGVAVADYNNVLDGDKIVETAVKNFGTVH 93 (604)
T ss_dssp HHHHHHHHHTTCEEEEECCCTTCHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf 999999985198899976999999999999999749997
No 255
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protein; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=23.77 E-value=30 Score=13.61 Aligned_cols=10 Identities=0% Similarity=-0.047 Sum_probs=4.1
Q ss_pred CCHHHHHHHH
Q ss_conf 9989999999
Q gi|254780465|r 67 IKSSKLRDIV 76 (469)
Q Consensus 67 i~~~~l~~ii 76 (469)
|++.++-+-+
T Consensus 61 i~e~~~i~~~ 70 (511)
T 2weu_A 61 LDEREWLPRC 70 (511)
T ss_dssp CCHHHHHHHT
T ss_pred CCHHHHHHHH
T ss_conf 9979999982
No 256
>1fx0_B ATP synthase beta chain; latent ATPase, thermal stability, potential tentoxin binding site, hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_B*
Probab=23.77 E-value=30 Score=13.61 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=19.6
Q ss_pred HHHHHH-CCCCCEEEE-ECCCCCHHHH--HH-HHHCCCCCCEEEEECC
Q ss_conf 999973-179820799-7166540467--99-9861667855999735
Q gi|254780465|r 123 MDHILE-ERDHYITIV-GATSGDTGAA--AI-KAFAGKKRINMYILFP 165 (469)
Q Consensus 123 ~~~~l~-~~~~~~~il-~ATSGDTGsA--a~-~a~~~~~~i~v~vlyP 165 (469)
+|-++. -+++++-|. ++-+|-|--+ .+ +.-+....+.|+++-=
T Consensus 156 ID~l~pigkGQr~gIfgg~g~GKt~l~~~~~~n~~~~~~~v~V~~~iG 203 (498)
T 1fx0_B 156 VNLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 203 (498)
T ss_dssp HHHHSCCCTTCCEEEEECSSSSHHHHHHHHHHHTTTTCSSCEEEEEES
T ss_pred ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 033145046777774558998878999999997887569989999964
No 257
>1iru_F 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4
Probab=23.64 E-value=31 Score=13.59 Aligned_cols=56 Identities=9% Similarity=0.015 Sum_probs=29.1
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
Q ss_conf 787089971796588899999975015431358311345565444011055899999874
Q gi|254780465|r 182 ASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIAL 241 (469)
Q Consensus 182 ~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~ 241 (469)
++|+ .+++-|.+-|+|.+++.+-..- ..+.+.---.+...++...+......|.+.
T Consensus 67 ~~~i-~~~~sG~~~D~~~l~~~~r~~~---~~~~~~~~~~i~~~~la~~l~~~~~~~t~~ 122 (263)
T 1iru_F 67 DNHI-GISIAGLTADARLLCNFMRQEC---LDSRFVFDRPLPVSRLVSLIGSKTQIPTQR 122 (263)
T ss_dssp ETTE-EEEEEECHHHHHHHHHHHHHHH---HHHHHHHSSCCCHHHHHHHHHHHHHHHHHB
T ss_pred CCCE-EEEEEEEEHHHHHHHHHHHHHH---HHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 6977-9997770075899999999999---999986288621889999888999988775
No 258
>2kua_A BCL-2-like protein 10; BOO, DIVA, apoptosis, BH3-only, membrane, mitochondri nucleus, transmembrane; NMR {Mus musculus}
Probab=23.47 E-value=17 Score=15.37 Aligned_cols=19 Identities=11% Similarity=0.225 Sum_probs=12.0
Q ss_pred CCHHHHHHHHHHHHHHCCC
Q ss_conf 8238889999999973179
Q gi|254780465|r 113 DIAMQFIAELMDHILEERD 131 (469)
Q Consensus 113 D~a~q~l~~~~~~~l~~~~ 131 (469)
.-..+++.-++.|.+++.+
T Consensus 15 ~~t~~L~~DYl~y~~~~pg 33 (170)
T 2kua_A 15 ERTRRLLSDYIFFCAREPD 33 (170)
T ss_dssp HHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999964899
No 259
>3fmc_A Putative succinylglutamate desuccinylase / aspartoacylase; YP_926482.1, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Shewanella amazonensis SB2B} PDB: 3lwu_A*
Probab=23.39 E-value=31 Score=13.56 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=20.3
Q ss_pred CCCCCEEEEECCCCCH--HHHHHHHHCC----CCCCEEEEECCCCCCCH
Q ss_conf 1798207997166540--4679998616----67855999735776760
Q gi|254780465|r 129 ERDHYITIVGATSGDT--GAAAIKAFAG----KKRINMYILFPEGRISV 171 (469)
Q Consensus 129 ~~~~~~~il~ATSGDT--GsAa~~a~~~----~~~i~v~vlyP~g~vS~ 171 (469)
+.+.++.|.++.-||- |..++.-+.. .+-...+++.|-.-..-
T Consensus 31 ~~Gp~v~i~agiHGdE~~g~~~~~~L~~~l~~~~l~G~v~ivP~~Np~g 79 (368)
T 3fmc_A 31 GAGPSVYIQANVHGAEVQGNAVIYQLMKLLEHYELLGDISLVPLANPLG 79 (368)
T ss_dssp SSCCCEEEEECSSTTCTHHHHHHHHHHHHHTTSCBSSCEEEECSCCHHH
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
T ss_conf 9998899987867461889999999998524530485099985468899
No 260
>1yqh_A DUF77, IG hypothetical 16092; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Bacillus cereus atcc 14579} SCOP: d.58.48.1
Probab=23.37 E-value=27 Score=13.99 Aligned_cols=16 Identities=19% Similarity=0.241 Sum_probs=13.8
Q ss_pred ECCCHHHHHHHHHHHH
Q ss_conf 1796588899999975
Q gi|254780465|r 190 VQSSFDDCQKIVKNLF 205 (469)
Q Consensus 190 v~G~FDDcq~~Vk~~f 205 (469)
|+|++|+|..+||++.
T Consensus 50 IEGe~dev~~~v~~~~ 65 (109)
T 1yqh_A 50 LEGELDVLLDVVKRAQ 65 (109)
T ss_dssp EEECHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHH
T ss_conf 9768999999999999
No 261
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase/structural protein complex; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B
Probab=22.85 E-value=17 Score=15.43 Aligned_cols=11 Identities=36% Similarity=0.730 Sum_probs=8.4
Q ss_pred EECCCCCCCHH
Q ss_conf 97188434988
Q gi|254780465|r 408 LATAHPSKFPD 418 (469)
Q Consensus 408 LATAHPaKFpe 418 (469)
...|||+||+.
T Consensus 27 t~~ahParfSP 37 (60)
T 2aus_D 27 TKVAHPPRFSP 37 (60)
T ss_dssp CEESSCCCCCS
T ss_pred CCCCCCCCCCC
T ss_conf 57678998897
No 262
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=22.65 E-value=32 Score=13.46 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=58.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC------CCCHHHHCCCEEECCCCEEEEEECCCHHHH---HHHH
Q ss_conf 9820799716654046799986166785599973577------676033213113447870899717965888---9999
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG------RISVVQQKQMTTSEASNINVIAVQSSFDDC---QKIV 201 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g------~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDc---q~~V 201 (469)
.+++.|++| |..|++.+.......-.+ ++||=-. ..-+++. ..+....+...+. .++..|| +-+|
T Consensus 4 ~~KV~IiGa--G~VG~~~A~~l~~~~~~e-l~L~Di~~~~~~g~a~Dl~h--~~~~~~~~~~~~~-~~~~~~~~~adivV 77 (317)
T 2ewd_A 4 RRKIAVIGS--GQIGGNIAYIVGKDNLAD-VVLFDIAEGIPQGKALDITH--SMVMFGSTSKVIG-TDDYADISGSDVVI 77 (317)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHHTCCE-EEEECSSSSHHHHHHHHHHH--HHHHHTCCCCEEE-ESCGGGGTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCCE-EEEECCCCCCCCEEEEHHHC--CCCCCCCCCEEEE-CCCHHHHCCCCEEE
T ss_conf 997999898--989999999997189987-99984899935320309658--6743588746960-58878957898799
Q ss_pred HHHHC-CHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 99750-1543135831134556544401105589999987447788738996346578878866777508987705872
Q gi|254780465|r 202 KNLFS-DVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA 279 (469)
Q Consensus 202 k~~f~-D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A 279 (469)
=..-. ..+=..+..|-..|. +|+-+++ -++.+....- ..+=.+|==|+.+..+.|..|+|=+|.+-.
T Consensus 78 i~ag~~r~~g~~R~dl~~~Na----~I~~~i~------~~i~~~~p~~-ivivvtNPvd~~t~~~~k~sg~~~~rvig~ 145 (317)
T 2ewd_A 78 ITASIPGRPKDDRSELLFGNA----RILDSVA------EGVKKYCPNA-FVICITNPLDVMVSHFQKVSGLPHNKVCGM 145 (317)
T ss_dssp ECCCCSSCCSSCGGGGHHHHH----HHHHHHH------HHHHHHCTTS-EEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred EECCCCCCCCCCHHHHHHHHH----HHHHHHH------HHHHHHCCCC-EEEEECCCCHHHHHHHHHHHCCCCCCEECC
T ss_conf 947888998989899977345----6899999------9999649994-799924870489999999629993123036
No 263
>2ck3_D ATP synthase beta chain; ATP phosphorylase, ATP phosphorylase (H+ transporting), F1FO ATP synthase, F1-ATPase, hydrolase, ATP synthesis; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1cow_D* 1bmf_D* 1e1q_D* 1e1r_D* 1efr_D* 1e79_E* 1h8h_D* 1ohh_D* 1qo1_D 1w0j_D* 1w0k_D* 1h8e_D* 2jdi_D* 2jiz_D* 2jj1_D* 2jj2_D* 2v7q_D* 2wss_D* 2w6j_D 2w6e_D ...
Probab=22.43 E-value=32 Score=13.43 Aligned_cols=22 Identities=27% Similarity=0.499 Sum_probs=11.6
Q ss_pred HHHHCCCHHCCCCCCCCCCCCC
Q ss_conf 7753222010234556564200
Q gi|254780465|r 288 RMFDMGMYRPEIVMETTSPAMD 309 (469)
Q Consensus 288 rf~~tG~y~~~~~~~T~SpsMD 309 (469)
+.+..|.|-.-.+..++|-.|+
T Consensus 342 ~la~~g~~PAId~l~S~SR~~~ 363 (482)
T 2ck3_D 342 AIAELGIYPAVDPLDSTSRIMD 363 (482)
T ss_dssp HHHTTTCSSCBCTTSCEETTCS
T ss_pred HHHHCCCCCCCCCCCCHHHCCC
T ss_conf 8986799998487513222266
No 264
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=22.26 E-value=33 Score=13.41 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=25.8
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 2079971665404679998616678559997357
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPE 166 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~ 166 (469)
++.|++| |..|++.+......+-+.=++||-.
T Consensus 2 KI~IiGa--G~VG~~~a~~l~~~~~~~el~L~Di 33 (304)
T 2v6b_A 2 KVGVVGT--GFVGSTAAFALVLRGSCSELVLVDR 33 (304)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 7999996--8899999999983799886999858
No 265
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=22.19 E-value=33 Score=13.40 Aligned_cols=128 Identities=15% Similarity=0.125 Sum_probs=64.6
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC------CCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHC
Q ss_conf 20799716654046799986166785599973577------676033213113447870899717965888999999750
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG------RISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFS 206 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g------~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~ 206 (469)
+++|++| |..|++.+.....++-++-++||=.. ..-+++- ...... .+.. ..|+..| +.
T Consensus 2 KV~IiGa--G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h--~~~~~~-~~~i--~~~~~~~--------~~ 66 (319)
T 1a5z_A 2 KIGIVGL--GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH--GTPFTR-RANI--YAGDYAD--------LK 66 (319)
T ss_dssp EEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH--HGGGSC-CCEE--EECCGGG--------GT
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHC--CCCCCC-CCEE--ECCCHHH--------HC
T ss_conf 7999997--989999999998379988799985888734418998867--464578-8758--2398799--------47
Q ss_pred CHHHHCCCCCCCCCCCCH----HHCC---CCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 154313583113455654----4401---105589999987447788738996346578878866777508987705872
Q gi|254780465|r 207 DVFFCHSVNLSGINSINW----ARIM---AQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA 279 (469)
Q Consensus 207 D~~~~~~~~l~s~NSIN~----~Ril---~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A 279 (469)
|.++ +-+++.-.... ..++ ++++.-+-. ++.+....- +++=.+|=-|+.+.++.|..|+|-+|.+-+
T Consensus 67 ~adi---vvitag~~~kpg~~R~dll~~Na~I~~~i~~--~i~~~~p~~-~vlvvsNPvd~~~~~~~k~sg~~~~~vig~ 140 (319)
T 1a5z_A 67 GSDV---VIVAAGVPQKPGETRLQLLGRNARVMKEIAR--NVSKYAPDS-IVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp TCSE---EEECCCCCCCSSCCHHHHHHHHHHHHHHHHH--HHHHHCTTC-EEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCE---EEECCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHCCCC-EEEEECCCHHHHHHHHHHHCCCCHHHEEEE
T ss_conf 9999---9986899899999878987622678888999--998429983-899934862568999999749983458840
Q ss_pred CC
Q ss_conf 36
Q gi|254780465|r 280 TN 281 (469)
Q Consensus 280 tN 281 (469)
-.
T Consensus 141 gt 142 (319)
T 1a5z_A 141 GT 142 (319)
T ss_dssp TT
T ss_pred CC
T ss_conf 33
No 266
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=22.08 E-value=33 Score=13.38 Aligned_cols=51 Identities=14% Similarity=0.264 Sum_probs=29.9
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHC---CCCCCEEEEECCCCCCCH
Q ss_conf 99999999731798207997166540467999861---667855999735776760
Q gi|254780465|r 119 IAELMDHILEERDHYITIVGATSGDTGAAAIKAFA---GKKRINMYILFPEGRISV 171 (469)
Q Consensus 119 l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~---~~~~i~v~vlyP~g~vS~ 171 (469)
+..++...+++.+.+. ++++=||-.-||.+.+.. +.+++..+.+ |.+-.|+
T Consensus 12 l~~~i~~~v~~~g~k~-vvvglSGGVDSav~A~La~~a~~~~v~~v~m-p~~~~~~ 65 (268)
T 1xng_A 12 LCDFLEKEVQKRGFKK-VVYGLSGGLDSAVVGVLCQKVFKENAHALLM-PSSVSMP 65 (268)
T ss_dssp HHHHHHHHHHHTTCCC-EEEECCSSHHHHHHHHHHHHHHGGGEEEEEC-CCSSSCH
T ss_pred HHHHHHHHHHHCCCCE-EEEECCCCHHHHHHHHHHHHHHHHCCEEEEC-CCHHCCH
T ss_conf 9999999999829981-9997868899999999999850322678713-5010571
No 267
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=22.06 E-value=33 Score=13.38 Aligned_cols=96 Identities=16% Similarity=0.214 Sum_probs=54.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCC---CCE-----EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 78998999999999863047667860477248---825-----4662138981206823888999999997317982079
Q gi|254780465|r 65 QEIKSSKLRDIVNRSYHCFRNAAVTPLIQLNA---NEF-----LLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITI 136 (469)
Q Consensus 65 ~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~~---~~~-----vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~i 136 (469)
.+++..+..++++.-+... -+.|-...+. +.| ..|++ |. -+ .+..-+-++.++.|
T Consensus 61 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~rY~r~~~~~~~~-~~------~~-------~~~Q~kL~~~~Vlv 123 (353)
T 3h5n_A 61 ANIPEKDFSNCFRFLKENF---FIIPGEYNNSTENNRYSRNFLHYQSY-GA------NP-------VLVQDKLKNAKVVI 123 (353)
T ss_dssp CCSCHHHHHHHHHHHHHTT---SEEEGGGGCSCTTSTTHHHHHHHHHT-TC------CH-------HHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHHHHHHCC---CCCCCCCCCHHHHHHHHHHHCCHHHC-CC------CC-------HHHHHHHHCCCEEE
T ss_conf 3675667999999998769---51560137813542556654004205-88------60-------79999985697999
Q ss_pred EECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC--CHHHHCCCEEE
Q ss_conf 971665404679998616678559997357767--60332131134
Q gi|254780465|r 137 VGATSGDTGAAAIKAFAGKKRINMYILFPEGRI--SVVQQKQMTTS 180 (469)
Q Consensus 137 l~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v--S~~Q~~qmtt~ 180 (469)
++| |-.|+.++..... .++.-+.|.=.+.| |.++|+.+.+.
T Consensus 124 iG~--GglGs~va~~La~-~Gvg~i~lvD~D~Ve~sNLnRQ~l~~~ 166 (353)
T 3h5n_A 124 LGC--GGIGNHVSVILAT-SGIGEIILIDNDQIENTNLTRQVLFSE 166 (353)
T ss_dssp ECC--SHHHHHHHHHHHH-HTCSEEEEEECCBCCGGGGGTCTTCCG
T ss_pred ECC--CHHHHHHHHHHHH-HCCCEEEEEECCEECHHHHCCCCCCCH
T ss_conf 876--8899999999998-269769999799915768572023596
No 268
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=22.01 E-value=33 Score=13.37 Aligned_cols=21 Identities=10% Similarity=0.109 Sum_probs=14.5
Q ss_pred EEEEECCCCCHHHHHHHHHCC
Q ss_conf 079971665404679998616
Q gi|254780465|r 134 ITIVGATSGDTGAAAIKAFAG 154 (469)
Q Consensus 134 ~~il~ATSGDTGsAa~~a~~~ 154 (469)
+++.|..||..|..++..++.
T Consensus 92 iV~yc~~s~~rs~~~a~~l~~ 112 (161)
T 1c25_A 92 VVFHCEFSSERGPRMCRYVRE 112 (161)
T ss_dssp EEEECSSSSSHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHH
T ss_conf 999969998049999999998
No 269
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, PSI, MCSG; 2.00A {Saccharomyces cerevisiae}
Probab=21.80 E-value=33 Score=13.35 Aligned_cols=72 Identities=7% Similarity=0.128 Sum_probs=43.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEC-CCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 9820799716654046799986166785599973-577676033213113447870899717-9658889999997501
Q gi|254780465|r 131 DHYITIVGATSGDTGAAAIKAFAGKKRINMYILF-PEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 131 ~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vly-P~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
+|.+.|-+|+|| -|.|.+..|... +-+++|.. -.. -..+++ +....+.+++.+.+| .+-++++++++++...
T Consensus 2 GKv~lITGas~G-IG~aia~~la~~-Ga~v~v~~~~r~-~~~l~~--l~~~~~~~~~~~~~Dvt~~~~~~~~~~~~~~~ 75 (254)
T 3kzv_A 2 GKVILVTGVSRG-IGKSIVDVLFSL-DKDTVVYGVARS-EAPLKK--LKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp CCEEEECSTTSH-HHHHHHHHHHHH-CSSCEEEEEESC-HHHHHH--HHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHC-CCCEEEEECCCC-HHHHHH--HHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 998999477759-999999999977-998899972699-999999--99970994799981289999999999999997
No 270
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=21.72 E-value=18 Score=15.21 Aligned_cols=11 Identities=27% Similarity=0.416 Sum_probs=8.0
Q ss_pred EECCCCCCCHH
Q ss_conf 97188434988
Q gi|254780465|r 408 LATAHPSKFPD 418 (469)
Q Consensus 408 LATAHPaKFpe 418 (469)
...|||+||+.
T Consensus 28 t~~a~ParfSP 38 (60)
T 2apo_B 28 TVIPKPPKFSL 38 (60)
T ss_dssp CBCCCCCCCCT
T ss_pred CCCCCCCCCCC
T ss_conf 67678998897
No 271
>1vi2_A Shikimate 5-dehydrogenase 2; structural genomics, oxidoreductase; HET: MSE NAD; 2.10A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 PDB: 1npd_A* 1o9b_A*
Probab=21.69 E-value=33 Score=13.33 Aligned_cols=23 Identities=22% Similarity=0.221 Sum_probs=11.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCC
Q ss_conf 7982079971665404679998616
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAG 154 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~ 154 (469)
+++++.|++| |-++.|++.+...
T Consensus 125 ~~k~vlilGa--GGaa~Ai~~~l~~ 147 (300)
T 1vi2_A 125 KGKTMVLLGA--GGASTAIGAQGAI 147 (300)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHH
T ss_pred CCCEEEEECC--CCHHHHHHHHHHH
T ss_conf 7876799547--6125899999997
No 272
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=21.58 E-value=33 Score=13.32 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=21.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
Q ss_conf 6823888999999997317982079971665404
Q gi|254780465|r 112 KDIAMQFIAELMDHILEERDHYITIVGATSGDTG 145 (469)
Q Consensus 112 KD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTG 145 (469)
-|..+.+-|-+..+ ...+.++.|++.|+|+.|
T Consensus 18 DDe~l~~GGtia~~--~~~G~~V~vv~lT~G~~g 49 (270)
T 3dfi_A 18 DDAVLSVGASLAQA--EQDGGKVTVFTVFAGSAA 49 (270)
T ss_dssp THHHHHHHHHHHHH--HHTTCEEEEEESSCCCCC
T ss_pred CHHHHHHHHHHHHH--HHCCCCEEEEEECCCCCC
T ss_conf 64888779999999--977993899997589656
No 273
>1stz_A Heat-inducible transcription repressor HRCA homolog; circe element, structural genomics, BSGC structure funded by NIH; 2.20A {Thermotoga maritima} SCOP: a.4.5.51 d.110.2.3
Probab=21.40 E-value=33 Score=13.40 Aligned_cols=43 Identities=12% Similarity=-0.050 Sum_probs=24.3
Q ss_pred HHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEE
Q ss_conf 6799986166785599973577676033213113447870899
Q gi|254780465|r 146 AAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVI 188 (469)
Q Consensus 146 sAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i 188 (469)
..|+....+..+.-.+|.-|.-.-..+++-++.-..+..+.++
T Consensus 121 ~~aa~~Ls~lt~~~~vv~~p~~~~~~l~~i~lv~l~~~~~l~v 163 (338)
T 1stz_A 121 FLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFS 163 (338)
T ss_dssp HHHHHHHHHHHTCEEEEECCCGGGCBCCEEEEEECSSSEEEEE
T ss_pred HHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEECCCCCEEE
T ss_conf 9999999987246467645752312022789998167750589
No 274
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4
Probab=21.32 E-value=19 Score=14.98 Aligned_cols=22 Identities=0% Similarity=0.175 Sum_probs=15.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 6899999999999611552058
Q gi|254780465|r 447 MNKNIDEIKKFIKKRNMESKIE 468 (469)
Q Consensus 447 l~nd~~~ik~fI~~k~~~~~~~ 468 (469)
..++..-.|++|+.+....+++
T Consensus 454 ~K~Sa~~y~~ii~~n~~p~~~~ 475 (481)
T 1qvb_A 454 LRPSALVFREIATHNGIPDELQ 475 (481)
T ss_dssp ECHHHHHHHHHHHHTBCCGGGG
T ss_pred CCCHHHHHHHHHHHCCCCCCCC
T ss_conf 0449999999998589982334
No 275
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=21.28 E-value=34 Score=13.27 Aligned_cols=132 Identities=17% Similarity=0.123 Sum_probs=65.4
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC--C----CCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHC
Q ss_conf 20799716654046799986166785599973577--6----76033213113447870899717965888999999750
Q gi|254780465|r 133 YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEG--R----ISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFS 206 (469)
Q Consensus 133 ~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g--~----vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~ 206 (469)
++.|++| |..|++.+.....+.-.+=++||=-. + .-+++ ++.+....+..... .+++.|| .
T Consensus 2 KI~IiGa--G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~--~~~~~~~~~~~i~~-~~~~~~~--------~ 68 (310)
T 1guz_A 2 KITVIGA--GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMY--ESGPVGLFDTKVTG-SNDYADT--------A 68 (310)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHH--TTHHHHTCCCEEEE-ESCGGGG--------T
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHH--CCCCCCCCCCEEEC-CCCHHHH--------C
T ss_conf 7999996--98999999999827999815997379982057998866--44765678747966-8867883--------6
Q ss_pred CHHHHCCCCCCCCCCCCHH--HC--CCCHHHHHHHH-HHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 1543135831134556544--40--11055899999-8744778873899634657887886677750898770587236
Q gi|254780465|r 207 DVFFCHSVNLSGINSINWA--RI--MAQIVYYFVSS-IALGSPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATN 281 (469)
Q Consensus 207 D~~~~~~~~l~s~NSIN~~--Ri--l~Q~vyYf~a~-~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN 281 (469)
|.++ .-+++..+-..+ |. +..-+=-|... -++.+...+-.+ +=.+|=-|+.+..+.+..|+|=+|++....
T Consensus 69 dadi---vvitag~~~k~g~~R~dll~~N~~I~~~i~~~i~~~~~~~iv-lvvtNPvd~~~~~~~~~sg~p~~rvig~gt 144 (310)
T 1guz_A 69 NSDI---VIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPII-IVVSNPLDIMTHVAWVRSGLPKERVIGMAG 144 (310)
T ss_dssp TCSE---EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEE-EECCSSHHHHHHHHHHHHCSCGGGEEEECH
T ss_pred CCCE---EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE-EECCCCHHHHHHHHHHHCCCCHHHEEEEEC
T ss_conf 8988---999500688989988999999999999998774156998299-976885177999999974997253897531
No 276
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=21.04 E-value=31 Score=13.57 Aligned_cols=130 Identities=12% Similarity=0.193 Sum_probs=66.1
Q ss_pred HHHHHCC-CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 9987515-789989999999998630476678604772488254662138981206823888999999997317982079
Q gi|254780465|r 58 IFRLFIG-QEIKSSKLRDIVNRSYHCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITI 136 (469)
Q Consensus 58 il~~f~~-~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~i 136 (469)
|++.|++ +|++.+++..|++.|-.. .. ....-..+..+..|.-||--|.. |.--. ++.+..+-+.+.+.
T Consensus 1 ~mkh~l~i~dls~~ei~~ll~~A~~l-k~-~~~~~~~~l~~k~v~llF~epST-------RTR~S-Fe~A~~~LGg~~i~ 70 (307)
T 2i6u_A 1 VIRHFLRDDDLSPAEQAEVLELAAEL-KK-DPVSRRPLQGPRGVAVIFDKNST-------RTRFS-FELGIAQLGGHAVV 70 (307)
T ss_dssp CCCCBSSGGGSCHHHHHHHHHHHHHH-HH-STTSCCTTTTTCEEEEEESSCCS-------HHHHH-HHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHH-HH-CCCCCCCCCCCCEEEEEECCCCC-------CHHHH-HHHHHHHCCCEEEE
T ss_conf 97356981009999999999999998-62-74346744679779999679975-------43999-99999986991851
Q ss_pred EE-CCC----CCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCC-HHHHHHHHHHH
Q ss_conf 97-166----5404679998616678559997357767603321311344787089971796-58889999997
Q gi|254780465|r 137 VG-ATS----GDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSS-FDDCQKIVKNL 204 (469)
Q Consensus 137 l~-ATS----GDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~-FDDcq~~Vk~~ 204 (469)
+- .+| |+|=.-.+..+... .+++|+.... -..+++ +. ...+|-+|.-.++ .-=||.|..-.
T Consensus 71 ~~~~~ss~~kgEs~~Dt~~~l~~~--~d~iv~R~~~-~~~~~~--~a--~~~~vPVINag~~~~HPtQaLlDl~ 137 (307)
T 2i6u_A 71 VDSGSTQLGRDETLQDTAKVLSRY--VDAIVWRTFG-QERLDA--MA--SVATVPVINALSDEFHPCQVLADLQ 137 (307)
T ss_dssp EEGGGSGGGGTCCHHHHHHHHHHH--EEEEEEECSS-HHHHHH--HH--HHCSSCEEESCCSSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCC--CCCEEEECHH-HHHHHH--HH--HHCCCCEEECCCCCCCHHHHHHHHH
T ss_conf 775435678898599999997442--2201341023-456999--98--7278764647998877689999999
No 277
>3gqb_B V-type ATP synthase beta chain; A3B3, V-ATPase, ATP synthesis, ATP-binding, hydrogen ION transport, hydrolase, ION transport; 2.80A {Thermus thermophilus HB8} PDB: 3a5c_D* 3a5d_D
Probab=20.98 E-value=34 Score=13.23 Aligned_cols=22 Identities=23% Similarity=0.392 Sum_probs=12.0
Q ss_pred HHHHCCCHHCCCCCCCCCCCCC
Q ss_conf 7753222010234556564200
Q gi|254780465|r 288 RMFDMGMYRPEIVMETTSPAMD 309 (469)
Q Consensus 288 rf~~tG~y~~~~~~~T~SpsMD 309 (469)
+....|.|-.-.+..+.|--|+
T Consensus 342 ~La~~g~yPAId~~~S~SR~~~ 363 (464)
T 3gqb_B 342 ELHRKGIYPPIDPLPSLSRLMN 363 (464)
T ss_dssp HHHHTTCSSCBCTTTCEETTGG
T ss_pred HHHHCCCCCCCCCCCCCCCCCC
T ss_conf 8997699887676764320033
No 278
>2ibo_A Hypothetical protein SP2199; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Streptococcus pneumoniae TIGR4} SCOP: d.58.48.1
Probab=20.86 E-value=31 Score=13.58 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=14.4
Q ss_pred ECCCHHHHHHHHHHHHC
Q ss_conf 17965888999999750
Q gi|254780465|r 190 VQSSFDDCQKIVKNLFS 206 (469)
Q Consensus 190 v~G~FDDcq~~Vk~~f~ 206 (469)
|+|++|++..+|+++..
T Consensus 45 IEGe~d~vm~~vk~~~e 61 (104)
T 2ibo_A 45 LEGEFDELMRILKEALE 61 (104)
T ss_dssp EEEEHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
T ss_conf 32789999999999999
No 279
>1j3b_A ATP-dependent phosphoenolpyruvate carboxykinase; adenosine triphosphate, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus HB8} SCOP: c.91.1.1 c.109.1.1 PDB: 1xkv_A* 2pc9_A*
Probab=20.84 E-value=29 Score=13.74 Aligned_cols=16 Identities=6% Similarity=0.181 Sum_probs=7.6
Q ss_pred CCHHHHHHHHHHHHHH
Q ss_conf 9989999999998630
Q gi|254780465|r 67 IKSSKLRDIVNRSYHC 82 (469)
Q Consensus 67 i~~~~l~~ii~~ay~~ 82 (469)
|+++....+.+++...
T Consensus 78 i~~e~F~~L~~~~~~y 93 (529)
T 1j3b_A 78 FAPEAFEALYQRVVQY 93 (529)
T ss_dssp ECHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
T ss_conf 8999999999999999
No 280
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short- chain oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=20.63 E-value=35 Score=13.18 Aligned_cols=65 Identities=12% Similarity=0.166 Sum_probs=42.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEEC-CCHHHHHHHHHHHHCC
Q ss_conf 79820799716654046799986166785599973577676033213113447870899717-9658889999997501
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQ-SSFDDCQKIVKNLFSD 207 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~-G~FDDcq~~Vk~~f~D 207 (469)
++|...|-+| |+--|.|.+..|.. .+-+|++..-. ..+ ...++....+| .+.++++++++++...
T Consensus 6 ~gK~alVTGa-s~GIG~aia~~la~-~Ga~V~~~~~~--~~~---------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 71 (250)
T 2fwm_X 6 SGKNVWVTGA-GKGIGYATALAFVE-AGAKVTGFDQA--FTQ---------EQYPFATEVMDVADAAQVAQVCQRLLAE 71 (250)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-TTCEEEEEESC--CCS---------SCCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHH-CCCEEEEEECC--HHH---------CCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 9998999488-76899999999998-79999996377--034---------5887508981179999999999999997
No 281
>6ldh_A M4 APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.00A {Squalus acanthias} SCOP: c.2.1.5 d.162.1.1 PDB: 8ldh_A* 1ldm_A* 9ldt_A* 9ldb_A* 1i10_A* 3ldh_A* 3h3f_A* 1t2f_A* 1i0z_A* 5ldh_A* 1v6a_A*
Probab=20.55 E-value=35 Score=13.17 Aligned_cols=125 Identities=18% Similarity=0.173 Sum_probs=61.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCC------CCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHH
Q ss_conf 798207997166540467999861667855999735776------76033213113447870899717965888999999
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGR------ISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKN 203 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~------vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~ 203 (469)
+-.++.|++| |..|++.+......+-.+=++||--.. .-+++- +.+..... .+--.++..+|
T Consensus 20 ~~~KI~IiGa--G~VG~~~a~~l~~~~l~~el~L~D~~~~~a~g~a~DL~h--~~~~~~~~--~~~~~~d~~~~------ 87 (330)
T 6ldh_A 20 SYNKITVVGV--GAVGMACAISILMKDLADEVALVDVMEDKLKGEMMDLQH--GSLFLHTA--KIVSGKDYSVS------ 87 (330)
T ss_dssp CSSEEEEECC--SHHHHHHHHHHHTTTCCSEEEEECSCHHHHHHHHHHHHH--TGGGCCCS--CEEEESSGGGG------
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHC--CCCCCCCC--EEECCCCHHHH------
T ss_conf 7987999898--989999999998279988799991899815999999875--76557998--49848867884------
Q ss_pred HHCCHHHH------------CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
Q ss_conf 75015431------------358311345565444011055899999874477887389963465788788667775089
Q gi|254780465|r 204 LFSDVFFC------------HSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTGNFGDIFAGYMAKMMGL 271 (469)
Q Consensus 204 ~f~D~~~~------------~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~Ak~MGL 271 (469)
.|.+.. .+..|...|. .++-+++ -.+.+..... +++=.+|==|+.+-.+.+..|+
T Consensus 88 --~~advvvi~ag~~rkpg~~R~dl~~~Na----~i~~~~~------~~i~~~~p~~-~vivvsNPvd~~~~~~~~~sg~ 154 (330)
T 6ldh_A 88 --AGSKLVVITAGARQQEGESRLNLVQRNV----NIFKFII------PNIVKHSPDC-IILVVSNPVDVLTYVAWKLSGL 154 (330)
T ss_dssp --TTCSEEEECCCCCCCTTCCHHHHHHHHH----HHHHHHH------HHHHHHCTTC-EEEECCSSHHHHHHHHHHHHTC
T ss_pred --CCCCEEEEECCCCCCCCCCHHHHHHHHH----HHHHHHH------HHHHHCCCCE-EEEEECCCCHHHHHHHHHHHCC
T ss_conf --6775899716888999998789988679----9999999------8776229972-9998168713799999998687
Q ss_pred CCCEEEEE
Q ss_conf 87705872
Q gi|254780465|r 272 PIEKLIIA 279 (469)
Q Consensus 272 PI~kli~A 279 (469)
|=+|.+-.
T Consensus 155 p~~~vig~ 162 (330)
T 6ldh_A 155 PMHRIIGS 162 (330)
T ss_dssp CGGGEEEC
T ss_pred CCCCEEEC
T ss_conf 97147964
No 282
>1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; phosphoglyerate mutase, SH3 domain binding, structural genomics, TBSGC; 1.70A {Mycobacterium tuberculosis} SCOP: c.60.1.1
Probab=20.41 E-value=34 Score=13.29 Aligned_cols=27 Identities=7% Similarity=0.287 Sum_probs=15.5
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHCCCCCCE
Q ss_conf 8873899634657887886677750898770
Q gi|254780465|r 245 NRNISFSVPTGNFGDIFAGYMAKMMGLPIEK 275 (469)
Q Consensus 245 ~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~k 275 (469)
++.| .+|=.| ++..++++..+|||.+.
T Consensus 175 ~~~V-LIVsHG---~~IR~l~~~l~~l~~e~ 201 (265)
T 1rii_A 175 GKTV-LIVAHG---NSLRALVKHLDQMSDDE 201 (265)
T ss_dssp TCCE-EEEECH---HHHHHHHHHHTTCCHHH
T ss_pred CCCE-EEEECC---HHHHHHHHHHHCCCHHH
T ss_conf 9818-999475---89999999994889899
No 283
>1iru_I 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4
Probab=20.32 E-value=19 Score=14.96 Aligned_cols=24 Identities=13% Similarity=0.034 Sum_probs=18.4
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHH
Q ss_conf 4787089971796588899999975
Q gi|254780465|r 181 EASNINVIAVQSSFDDCQKIVKNLF 205 (469)
Q Consensus 181 ~~~Nv~~i~v~G~FDDcq~~Vk~~f 205 (469)
.++|+ .+++-|..-|||.+++.+-
T Consensus 37 I~~~i-~~~~aG~~aD~~~l~~~~~ 60 (234)
T 1iru_I 37 ISPNI-YCCGAGTAADTDMTTQLIS 60 (234)
T ss_dssp EETTE-EEEEEESHHHHHHHHHHHH
T ss_pred ECCCE-EEEEECCHHHHHHHHHHHH
T ss_conf 67979-9999507289999999999
No 284
>3gmb_A 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase; flavin monooxygenase, oxidoreductase; HET: FAD; 2.10A {Mesorhizobium loti} PDB: 3gmc_A*
Probab=20.17 E-value=36 Score=13.12 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=24.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 7982079971665404679998616678559997
Q gi|254780465|r 130 RDHYITIVGATSGDTGAAAIKAFAGKKRINMYIL 163 (469)
Q Consensus 130 ~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vl 163 (469)
+.+++.|++| |=.|.+++..++ +.+++|.|+
T Consensus 46 ~~~~V~IVGa--GpaGl~~A~~La-r~G~~V~Vl 76 (415)
T 3gmb_A 46 KTRRAEVAGG--GFAGLTAAIALK-QNGWDVRLH 76 (415)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHH-HTTCEEEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHH-HCCCCEEEE
T ss_conf 9898999896--789999999999-689999999
No 285
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=20.05 E-value=36 Score=13.10 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=26.6
Q ss_pred HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC--CCCCEEEEECCCCCCC
Q ss_conf 999997317982079971665404679998616--6785599973577676
Q gi|254780465|r 122 LMDHILEERDHYITIVGATSGDTGAAAIKAFAG--KKRINMYILFPEGRIS 170 (469)
Q Consensus 122 ~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~--~~~i~v~vlyP~g~vS 170 (469)
.+.-.+++.+.+ .++++=||-.-||.+.+... ..++.. +..|....+
T Consensus 19 ~i~~~~~~~~~~-~vvvglSGGVDSav~A~L~~~a~~~v~~-v~m~~~~~~ 67 (249)
T 3fiu_A 19 WLSDSCMNYPAE-GFVIGLSGGIDSAVAASLAVKTGLPTTA-LILPSDNNQ 67 (249)
T ss_dssp HHHHHHHTTTCS-EEEEECCSSHHHHHHHHHHHHTTSCEEE-EECCCTTSC
T ss_pred HHHHHHHHCCCC-EEEEECCCCHHHHHHHHHHHHCCCCCEE-EECCCCCCC
T ss_conf 999999980998-2999677989999999999982987525-236876330
Done!