HHsearch alignment for GI: 254780466 and conserved domain: PRK13168

>PRK13168 rumA 23S rRNA 5-methyluridine methyltransferase; Reviewed.
Probab=97.40  E-value=0.00058  Score=44.24  Aligned_cols=59  Identities=22%  Similarity=0.339  Sum_probs=46.9

Q ss_pred             CHHHHHHHHHHC-CCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHH
Q ss_conf             189999999852-89988899868885179999998098169997289999999999963
Q gi|254780466|r  209 PEALLSRILVSS-TKPGDIILDPFFGSGTSGAVAKKLRRSFIGIEMKQDYIDIATKRIAS  267 (375)
Q Consensus       209 P~~LleriI~~~-S~~gDiVLDPF~GSGTT~~aA~~lgR~~IGiE~~~~Y~~~a~~Rl~~  267 (375)
T Consensus       279 ae~L~~~a~~~l~~~~~~~VlDLYcGvGtfsl~LA~~~~~V~gvE~~~~av~~A~~Na~~  338 (440)
T PRK13168        279 NQKMVARALEWLDPQPGDRVLDLFCGLGNFTLPLARQAAEVVGVEGVPAMVERARENARR  338 (440)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             999999999985267898899862385621111353067688760579999999999997