HHsearch alignment for GI: 254780466 and conserved domain: pfam05175
>pfam05175 MTS Methyltransferase small domain. This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases .
Probab=95.46 E-value=0.036 Score=33.30 Aligned_cols=49 Identities=20% Similarity=0.220 Sum_probs=41.8
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHHHCC
Q ss_conf 8998889986888517999999809--816999728999999999996305
Q gi|254780466|r 221 TKPGDIILDPFFGSGTSGAVAKKLR--RSFIGIEMKQDYIDIATKRIASVQ 269 (375)
Q Consensus 221 S~~gDiVLDPF~GSGTT~~aA~~lg--R~~IGiE~~~~Y~~~a~~Rl~~~~ 269 (375)
T Consensus 29 ~~~~g~vLDlGcG~G~i~~~la~~~p~~~v~~vDi~~~Al~~a~~N~~~n~ 79 (170)
T pfam05175 29 KPLGGKVLDLGCGYGVLGAALAKRSPDLEVTMVDINARALESARANLAANG 79 (170)
T ss_pred CCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHC
T ss_conf 778994999776482989999997898679851544999999999999809