HHsearch alignment for GI: 254780466 and conserved domain: smart00650
>smart00650 rADc Ribosomal RNA adenine dimethylases.
Probab=90.02 E-value=1 Score=24.49 Aligned_cols=55 Identities=18% Similarity=0.292 Sum_probs=44.2
Q ss_pred HHHHHHHCC-CCCCEEEECCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHH
Q ss_conf 999998528-9988899868885179999998098169997289999999999963
Q gi|254780466|r 213 LSRILVSST-KPGDIILDPFFGSGTSGAVAKKLRRSFIGIEMKQDYIDIATKRIAS 267 (375)
Q Consensus 213 leriI~~~S-~~gDiVLDPF~GSGTT~~aA~~lgR~~IGiE~~~~Y~~~a~~Rl~~ 267 (375)
T Consensus 2 i~kIv~~a~~~~~d~VlEIGPG~G~LT~~Ll~~~~~v~aiE~D~~l~~~L~~~~~~ 57 (169)
T smart00650 2 IDKIVRAANLRPGDTVLEIGPGKGALTEELLERAARVTAIEIDPRLAPRLREKFAA 57 (169)
T ss_pred HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCC
T ss_conf 88998863899949799968970299999997316353163788999999986410