HHsearch results for GI: 254780466 and protein with PDBid: 1g8a_A
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 1pry_A
Probab=96.72 E-value=0.0029 Score=38.64 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=42.0
Q ss_pred CCCCCCEEEECCCCCHHHH-HHHHHHC--CEEEEEEECHHHHHHHHHHHHHCC
Q ss_conf 2899888998688851799-9999809--816999728999999999996305
Q gi|254780466|r 220 STKPGDIILDPFFGSGTSG-AVAKKLR--RSFIGIEMKQDYIDIATKRIASVQ 269 (375)
Q Consensus 220 ~S~~gDiVLDPF~GSGTT~-~aA~~lg--R~~IGiE~~~~Y~~~a~~Rl~~~~ 269 (375)
--+||+.|||-.||+|+|. .+|...| -+-+|+|+++..++.+.++.+...
T Consensus 70 ~i~pG~~VLDlG~G~G~~~~~la~~vg~~G~V~avD~s~~~l~~l~~~~~~~~ 122 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERR 122 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCT
T ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf 98999999997178788999999984899669999899999999998787669