HHsearch results for GI: 254780466 and protein with PDBid: 1g8a_A

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 1pry_A
Probab=96.72  E-value=0.0029  Score=38.64  Aligned_cols=50  Identities=22%  Similarity=0.296  Sum_probs=42.0

Q ss_pred             CCCCCCEEEECCCCCHHHH-HHHHHHC--CEEEEEEECHHHHHHHHHHHHHCC
Q ss_conf             2899888998688851799-9999809--816999728999999999996305
Q gi|254780466|r  220 STKPGDIILDPFFGSGTSG-AVAKKLR--RSFIGIEMKQDYIDIATKRIASVQ  269 (375)
Q Consensus       220 ~S~~gDiVLDPF~GSGTT~-~aA~~lg--R~~IGiE~~~~Y~~~a~~Rl~~~~  269 (375)
                      --+||+.|||-.||+|+|. .+|...|  -+-+|+|+++..++.+.++.+...
T Consensus        70 ~i~pG~~VLDlG~G~G~~~~~la~~vg~~G~V~avD~s~~~l~~l~~~~~~~~  122 (227)
T 1g8a_A           70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERR  122 (227)
T ss_dssp             CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCT
T ss_pred             CCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             98999999997178788999999984899669999899999999998787669