HHsearch results for GI: 254780466 and protein with PDBid: 1mjf_A
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.15 E-value=0.018 Score=33.83 Aligned_cols=90 Identities=18% Similarity=0.282 Sum_probs=54.5
Q ss_pred CCCEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 27085172599897284147118984778761558713336785130013443577898999998899999999863968
Q gi|254780466|r 20 KDKIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRVLKPN 99 (375)
Q Consensus 20 ~nkI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~RvLK~~ 99 (375)
+-+|+.+|+.+.|+. +++.|+|+.|++-..+. ...-|+.+.+..|+|.|+++
T Consensus 135 rv~v~~~Da~~~l~~--~~~yDvIi~D~~~p~~~--------------------------~~~L~t~eF~~~~~~~L~~~ 186 (281)
T 1mjf_A 135 KAKLTIGDGFEFIKN--NRGFDVIIADSTDPVGP--------------------------AKVLFSEEFYRYVYDALNNP 186 (281)
T ss_dssp SEEEEESCHHHHHHH--CCCEEEEEEECCCCC-------------------------------TTSHHHHHHHHHHEEEE
T ss_pred CEEEEECHHHHHHHC--CCCCCEEEEECCCCCCC--------------------------CCCCCCHHHHHHHHHHHCCC
T ss_conf 669996218999730--78878899918998886--------------------------53236799999998741798
Q ss_pred CEEEEECC--H---HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC
Q ss_conf 72999834--6---8889999876405786012468731567777577
Q gi|254780466|r 100 GTLWVIGS--Y---HNIFRIGTMLQNLNFWILNDIVWRKSNPMPNFRG 142 (375)
Q Consensus 100 Gsi~v~~~--~---~~i~~i~~~l~~~gf~~~n~IIW~K~n~~pn~~g 142 (375)
|.+.+.+. + .....+...++++ |. + ++....++|.+.+
T Consensus 187 Gilv~q~~~~~~~~~~~~~i~~tl~~~-F~--~--V~~~~~~vp~y~~ 229 (281)
T 1mjf_A 187 GIYVTQAGSVYLFTDELISAYKEMKKV-FD--R--VYYYSFPVIGYAS 229 (281)
T ss_dssp EEEEEEEEETTTSHHHHHHHHHHHHHH-CS--E--EEEEEECCTTSSS
T ss_pred CEEEECCCCCHHCCHHHHHHHHHHHHH-CC--C--EEEEEEEECCCCC
T ss_conf 099990788000526789999999987-89--3--3999878568886