HHsearch results for GI: 254780466 and protein with PDBid: 1xj5_A
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.92 E-value=0.011 Score=35.27 Aligned_cols=64 Identities=17% Similarity=0.353 Sum_probs=41.9
Q ss_pred HHHCCCEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 55327085172599897284147118984778761558713336785130013443577898999998899999999863
Q gi|254780466|r 17 FEWKDKIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRVL 96 (375)
Q Consensus 17 ~~~~nkI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~RvL 96 (375)
.+=+-+++.+|+.+.|+..++++.|+|+.|.+-..+. ...-|+.+++..|++.|
T Consensus 172 ~dprv~iii~Dg~~~l~~~~~~~yDvIIvD~~dp~~~--------------------------~~~L~t~eFy~~~~~~L 225 (334)
T 1xj5_A 172 EDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGP--------------------------AKELFEKPFFQSVARAL 225 (334)
T ss_dssp GSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSG--------------------------GGGGGSHHHHHHHHHHE
T ss_pred CCCCEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCC--------------------------CHHHCCHHHHHHHHHHC
T ss_conf 7998799986279997515335667799978998873--------------------------14336899999999756
Q ss_pred CCCCEEEEEC
Q ss_conf 9687299983
Q gi|254780466|r 97 KPNGTLWVIG 106 (375)
Q Consensus 97 K~~Gsi~v~~ 106 (375)
+++|.+.+.+
T Consensus 226 ~p~Gv~v~q~ 235 (334)
T 1xj5_A 226 RPGGVVCTQA 235 (334)
T ss_dssp EEEEEEEEEC
T ss_pred CCCCEEEEEC
T ss_conf 9998999927