HHsearch results for GI: 254780466 and protein with PDBid: 1xj5_A

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.92  E-value=0.011  Score=35.27  Aligned_cols=64  Identities=17%  Similarity=0.353  Sum_probs=41.9

Q ss_pred             HHHCCCEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             55327085172599897284147118984778761558713336785130013443577898999998899999999863
Q gi|254780466|r   17 FEWKDKIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRVL   96 (375)
Q Consensus        17 ~~~~nkI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~RvL   96 (375)
                      .+=+-+++.+|+.+.|+..++++.|+|+.|.+-..+.                          ...-|+.+++..|++.|
T Consensus       172 ~dprv~iii~Dg~~~l~~~~~~~yDvIIvD~~dp~~~--------------------------~~~L~t~eFy~~~~~~L  225 (334)
T 1xj5_A          172 EDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGP--------------------------AKELFEKPFFQSVARAL  225 (334)
T ss_dssp             GSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSG--------------------------GGGGGSHHHHHHHHHHE
T ss_pred             CCCCEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCC--------------------------CHHHCCHHHHHHHHHHC
T ss_conf             7998799986279997515335667799978998873--------------------------14336899999999756


Q ss_pred             CCCCEEEEEC
Q ss_conf             9687299983
Q gi|254780466|r   97 KPNGTLWVIG  106 (375)
Q Consensus        97 K~~Gsi~v~~  106 (375)
                      +++|.+.+.+
T Consensus       226 ~p~Gv~v~q~  235 (334)
T 1xj5_A          226 RPGGVVCTQA  235 (334)
T ss_dssp             EEEEEEEEEC
T ss_pred             CCCCEEEEEC
T ss_conf             9998999927