HHsearch results for GI: 254780466 and protein with PDBid: 2pjd_A
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.90 E-value=0.019 Score=33.67 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=23.4
Q ss_pred HHHHHHHHHCCCCCEEEEECCHHH-HHHHHHHHHHC
Q ss_conf 999999986396872999834688-89999876405
Q gi|254780466|r 87 AWLLACRRVLKPNGTLWVIGSYHN-IFRIGTMLQNL 121 (375)
Q Consensus 87 ~wl~e~~RvLK~~Gsi~v~~~~~~-i~~i~~~l~~~ 121 (375)
..|..+...|+++|.||+.|.-.. +-.+...+++.
T Consensus 93 ~~l~~~~~~l~~g~~i~~~G~~~~gi~s~~k~l~~~ 128 (343)
T 2pjd_A 93 FQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADY 128 (343)
T ss_dssp HHHHHHHTTSCTTCEEEEEEEGGGTGGGHHHHHTTT
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 999999974799977999974562678799999875