HHsearch results for GI: 254780466 and protein with PDBid: 3cvo_A
>3cvo_A Methyltransferase-like protein of unknown function; YP_167254.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=94.62 E-value=0.13 Score=28.68 Aligned_cols=165 Identities=13% Similarity=0.137 Sum_probs=96.0
Q ss_pred CCCCC--CCCCCCHH--HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCCCHH
Q ss_conf 87533--68778189--999999852899888998688851799999980981699972899999999999630568765
Q gi|254780466|r 199 DGEKL--HPTQKPEA--LLSRILVSSTKPGDIILDPFFGSGTSGAVAKKLRRSFIGIEMKQDYIDIATKRIASVQPLGNI 274 (375)
Q Consensus 199 ~g~k~--HPTqKP~~--LleriI~~~S~~gDiVLDPF~GSGTT~~aA~~lgR~~IGiE~~~~Y~~~a~~Rl~~~~~~~~~ 274 (375)
.+++. +.|..+.+ |++..+. ++++||.- +-.|||..+|+..+.+.+.+|.|+++++..++++.........
T Consensus 6 ~~~~~~p~lt~~~~e~~~l~~~l~----~~~~iLE~-GSGgST~~~a~~~~~~I~SVE~d~~W~~~v~~~l~~~~~~~~~ 80 (202)
T 3cvo_A 6 SGDQMRPELTMPPAEAEALRMAYE----EAEVILEY-GSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGT 80 (202)
T ss_dssp ---CCCCCCCSCHHHHHHHHHHHH----HCSEEEEE-SCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHC----CCCEEEEE-CCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 777668777899889999999825----79999996-8989899999817980899679999999999986541330123
Q ss_pred HHCCCC-----------CCCCCCCCCHHHHHHC---C-C-CCCCCEEECCCCCEEE------EECCCCCEEECC-EEC-C
Q ss_conf 630244-----------4333775523469882---8-6-5877657668980699------981598178698-653-1
Q gi|254780466|r 275 ELTVLT-----------GKRTEPRVAFNLLVER---G-L-IQPGQILTNAQGNISA------TVCADGTLISGT-ELG-S 330 (375)
Q Consensus 275 ~~~~~~-----------~~~~~~rvpfg~lie~---g-~-l~~g~~L~~~~~~~~a------~v~~DG~l~~~~-~~g-s 330 (375)
.+.... ......+..|...... . . -++--+|.|-+-|..| .++.+|.|+.+| ... .
T Consensus 81 ~~~~~~~d~g~~~~~g~p~~~~~~~~~~~Y~~~i~~~~~~~~~DlIlIDGR~R~aC~l~~~~~lk~ggiIifDDy~~R~~ 160 (202)
T 3cvo_A 81 EVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLFDDYSQRRW 160 (202)
T ss_dssp EEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEETTGGGCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
T ss_conf 34434467664333689962544401988788898753456887899756378999999999669994899967877626
Q ss_pred HHHHHHHHCCCCCCCCEEEEEEEECCEEEEHHHHHHHHHH
Q ss_conf 9999987449810067114679759957129999999998
Q gi|254780466|r 331 IHRVGAKVSGSETCNGWNFWYFEKLGELHSINTLRILVRK 370 (375)
Q Consensus 331 Ih~i~a~~~~~~~cNGw~fw~~~~~~~~~~id~lR~~~r~ 370 (375)
-|.|---+.--+.+.---.+++ +.+..+.++|-+.++.
T Consensus 161 Yh~v~~~~~~~~~~~r~a~F~v--~~~~~~~~~l~~~~~~ 198 (202)
T 3cvo_A 161 QHQVEEFLGAPLMIGRLAAFQV--EPQPIPPGSLMQLIRT 198 (202)
T ss_dssp GGGGHHHHCCCEEETTEEEEEE--CCCCCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEE--CCCCCCHHHHHHHHHH
T ss_conf 7999998658881086689986--8988998999999998