HHsearch results for GI: 254780466 and protein with PDBid: 3ldu_A
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.42 E-value=4.9e-07 Score=61.58 Aligned_cols=68 Identities=25% Similarity=0.380 Sum_probs=55.7
Q ss_pred CCCCCCCCHHHHHHHHHHCC-CCCCEEEECCCCCHHHHHHHHHHC-----------------------------------
Q ss_conf 33687781899999998528-998889986888517999999809-----------------------------------
Q gi|254780466|r 202 KLHPTQKPEALLSRILVSST-KPGDIILDPFFGSGTSGAVAKKLR----------------------------------- 245 (375)
Q Consensus 202 k~HPTqKP~~LleriI~~~S-~~gDiVLDPF~GSGTT~~aA~~lg----------------------------------- 245 (375)
..|+++-.+.|..-+|..+. ++++.|+||||||||-++-|..+.
T Consensus 173 ~~~~ApLretLAaall~l~~~~~~~~l~DPmCGSGTilIEAal~a~~~~pg~~r~f~f~~~~~~~~~~w~~~~~~~~~~~ 252 (385)
T 3ldu_A 173 KANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKI 252 (385)
T ss_dssp C--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 67878877999999999637889985578889956799999999808797756223443221268899999999998632
Q ss_pred -----CEEEEEEECHHHHHHHHHHHHHCC
Q ss_conf -----816999728999999999996305
Q gi|254780466|r 246 -----RSFIGIEMKQDYIDIATKRIASVQ 269 (375)
Q Consensus 246 -----R~~IGiE~~~~Y~~~a~~Rl~~~~ 269 (375)
=+.+|.|+|+..++.|+.-++..-
T Consensus 253 ~~~~~~~i~g~D~d~~~i~~a~~N~~~ag 281 (385)
T 3ldu_A 253 DNESKFKIYGYDIDEESIDIARENAEIAG 281 (385)
T ss_dssp CCSCCCCEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHCC
T ss_conf 04667867996587889999999999739