PSIBLAST alignment of GI: 254780466 and protein with PDB id: 1boo

>gi|6729995|pdb|1BOO|A Chain A, Pvuii Dna Methyltransferase (Cytosine-N4-Specific) Length = 323
 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 59/293 (20%), Positives = 103/293 (35%), Gaps = 67/293 (22%)

Query: 24  IKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDA 83
             G+S+ +LE  P +S+ L+   PP+ LQ   +    +                   Y  
Sbjct: 18  YIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQ----------------HEYVD 61

Query: 84  FTRAWLLACRRVLKPNGTLWVIG-----------SYHNIFRIGTMLQNLNFWILNDIVWR 132
           +  ++     + LKP+G+  V             S +N   +  M+  + F++  D  W 
Sbjct: 62  WFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWF 121

Query: 133 KSNPMP------NFRGRRFQNAHETLIWASPSPKAK--------GYTFNYDALKAANEDV 178
             + +P      N R  R ++A  T+ W S +   K         Y+     L    +  
Sbjct: 122 NPSKLPSPIEWVNKRKIRVKDAVNTVWWFSKTEWPKSDITKVLAPYSDRMKKLIEDPDKF 181

Query: 179 QMRSDWLIPICSGSERLRNKDGE--------------------------KLHPTQKPEAL 212
                       G    ++  G                           K HP + P  L
Sbjct: 182 YTPKTRPSGHDIGKSFSKDNGGSIPPNLLQISNSESNGQYLANCKLMGIKAHPARFPAKL 241

Query: 213 LSRILVSSTKPGDIILDPFFGSGTSGAVAKKLRRSFIGIEMKQDYIDIATKRI 265
               +   T+P D+++D F GS T+G VA++  R +I  EMK +Y+  +  R 
Sbjct: 242 PEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRF 294